data_2WQE
#
_model_server_result.job_id            dJKh-Ok-q_M521k8UrehBw 
_model_server_result.datetime_utc      '2024-11-14 17:50:45' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2wqe 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":1391}' 
#
_entry.id    2WQE 
#
_exptl.entry_id    2WQE 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              427.201 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            "ADENOSINE-5'-DIPHOSPHATE" 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            2WQE 
_cell.length_a            85.575 
_cell.length_b            85.575 
_cell.length_c            79.949 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 2WQE 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        92 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 41 21 2' 
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_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 B N N 
? 2 C N N 
? 2 D N N 
#
_chem_comp.formula           'C10 H15 N5 O10 P2' 
_chem_comp.formula_weight    427.201 
_chem_comp.id                ADP 
_chem_comp.mon_nstd_flag     n 
_chem_comp.name              "ADENOSINE-5'-DIPHOSPHATE" 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PB O1B ADP doub 1 n n 
PB O2B ADP sing 2 n n 
PB O3B ADP sing 3 n n 
PB O3A ADP sing 4 n n 
O2B HOB2 ADP sing 5 n n 
O3B HOB3 ADP sing 6 n n 
PA O1A ADP doub 7 n n 
PA O2A ADP sing 8 n n 
PA O3A ADP sing 9 n n 
PA O5' ADP sing 10 n n 
O2A HOA2 ADP sing 11 n n 
O5' C5' ADP sing 12 n n 
C5' C4' ADP sing 13 n n 
C5' "H5'1" ADP sing 14 n n 
C5' "H5'2" ADP sing 15 n n 
C4' O4' ADP sing 16 n n 
C4' C3' ADP sing 17 n n 
C4' H4' ADP sing 18 n n 
O4' C1' ADP sing 19 n n 
C3' O3' ADP sing 20 n n 
C3' C2' ADP sing 21 n n 
C3' H3' ADP sing 22 n n 
O3' HO3' ADP sing 23 n n 
C2' O2' ADP sing 24 n n 
C2' C1' ADP sing 25 n n 
C2' H2' ADP sing 26 n n 
O2' HO2' ADP sing 27 n n 
C1' N9 ADP sing 28 n n 
C1' H1' ADP sing 29 n n 
N9 C8 ADP sing 30 n y 
N9 C4 ADP sing 31 n y 
C8 N7 ADP doub 32 n y 
C8 H8 ADP sing 33 n n 
N7 C5 ADP sing 34 n y 
C5 C6 ADP sing 35 n y 
C5 C4 ADP doub 36 n y 
C6 N6 ADP sing 37 n n 
C6 N1 ADP doub 38 n y 
N6 HN61 ADP sing 39 n n 
N6 HN62 ADP sing 40 n n 
N1 C2 ADP sing 41 n y 
C2 N3 ADP doub 42 n y 
C2 H2 ADP sing 43 n n 
N3 C4 ADP sing 44 n y 
#
_atom_sites.entry_id                     2WQE 
_atom_sites.fract_transf_matrix[1][1]    0.011686 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.011686 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.012508 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 ADP A 1 1389 1389 ADP ADP . 
C 2 ADP A 1 1390 1390 ADP ADP . 
D 2 ADP A 1 1391 1391 ADP ADP . 
E 3 HOH A 1 2001 2001 HOH HOH . 
E 3 HOH A 2 2002 2002 HOH HOH . 
E 3 HOH A 3 2003 2003 HOH HOH . 
E 3 HOH A 4 2004 2004 HOH HOH . 
E 3 HOH A 5 2005 2005 HOH HOH . 
E 3 HOH A 6 2006 2006 HOH HOH . 
E 3 HOH A 7 2007 2007 HOH HOH . 
E 3 HOH A 8 2008 2008 HOH HOH . 
E 3 HOH A 9 2009 2009 HOH HOH . 
E 3 HOH A 10 2010 2010 HOH HOH . 
E 3 HOH A 11 2011 2011 HOH HOH . 
E 3 HOH A 12 2012 2012 HOH HOH . 
E 3 HOH A 13 2013 2013 HOH HOH . 
E 3 HOH A 14 2014 2014 HOH HOH . 
E 3 HOH A 15 2015 2015 HOH HOH . 
E 3 HOH A 16 2016 2016 HOH HOH . 
E 3 HOH A 17 2017 2017 HOH HOH . 
E 3 HOH A 18 2018 2018 HOH HOH . 
E 3 HOH A 19 2019 2019 HOH HOH . 
E 3 HOH A 20 2020 2020 HOH HOH . 
E 3 HOH A 21 2021 2021 HOH HOH . 
E 3 HOH A 22 2022 2022 HOH HOH . 
E 3 HOH A 23 2023 2023 HOH HOH . 
E 3 HOH A 24 2024 2024 HOH HOH . 
E 3 HOH A 25 2025 2025 HOH HOH . 
E 3 HOH A 26 2026 2026 HOH HOH . 
E 3 HOH A 27 2027 2027 HOH HOH . 
E 3 HOH A 28 2028 2028 HOH HOH . 
E 3 HOH A 29 2029 2029 HOH HOH . 
E 3 HOH A 30 2030 2030 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PB ADP . . . D 2 -25.644 15.566 16.855 1 120.62 ? PB ADP 1391 A 1 
HETATM 2 O O1B ADP . . . D 2 -26.989 16.102 17.294 1 99.55 ? O1B ADP 1391 A 1 
HETATM 3 O O2B ADP . . . D 2 -24.695 16.613 16.32 1 111.43 ? O2B ADP 1391 A 1 
HETATM 4 O O3B ADP . . . D 2 -25.025 14.568 17.808 1 104.43 ? O3B ADP 1391 A 1 
HETATM 5 P PA ADP . . . D 2 -27.021 15.106 14.424 1 112.16 ? PA ADP 1391 A 1 
HETATM 6 O O1A ADP . . . D 2 -27.589 16.481 14.709 1 100.64 ? O1A ADP 1391 A 1 
HETATM 7 O O2A ADP . . . D 2 -26.296 14.858 13.121 1 95.03 ? O2A ADP 1391 A 1 
HETATM 8 O O3A ADP . . . D 2 -25.999 14.647 15.585 1 111.55 ? O3A ADP 1391 A 1 
HETATM 9 O O5' ADP . . . D 2 -28.169 13.99 14.636 1 94.21 ? O5' ADP 1391 A 1 
HETATM 10 C C5' ADP . . . D 2 -27.802 12.617 14.798 1 91.05 ? C5' ADP 1391 A 1 
HETATM 11 C C4' ADP . . . D 2 -28.378 11.761 13.676 1 88.98 ? C4' ADP 1391 A 1 
HETATM 12 O O4' ADP . . . D 2 -29.31 12.538 12.924 1 85.39 ? O4' ADP 1391 A 1 
HETATM 13 C C3' ADP . . . D 2 -27.313 11.277 12.691 1 86.82 ? C3' ADP 1391 A 1 
HETATM 14 O O3' ADP . . . D 2 -26.995 9.895 12.915 1 96.55 ? O3' ADP 1391 A 1 
HETATM 15 C C2' ADP . . . D 2 -27.892 11.492 11.299 1 81.54 ? C2' ADP 1391 A 1 
HETATM 16 O O2' ADP . . . D 2 -28.312 10.25 10.713 1 82.47 ? O2' ADP 1391 A 1 
HETATM 17 C C1' ADP . . . D 2 -29.147 12.306 11.517 1 77.44 ? C1' ADP 1391 A 1 
HETATM 18 N N9 ADP . . . D 2 -29.219 13.606 10.801 1 57.82 ? N9 ADP 1391 A 1 
HETATM 19 C C8 ADP . . . D 2 -28.928 14.819 11.309 1 58.66 ? C8 ADP 1391 A 1 
HETATM 20 N N7 ADP . . . D 2 -29.162 15.8 10.401 1 54.44 ? N7 ADP 1391 A 1 
HETATM 21 C C5 ADP . . . D 2 -29.632 15.204 9.288 1 48.01 ? C5 ADP 1391 A 1 
HETATM 22 C C6 ADP . . . D 2 -30.089 15.653 7.95 1 51.1 ? C6 ADP 1391 A 1 
HETATM 23 N N6 ADP . . . D 2 -30.087 16.97 7.604 1 54.12 ? N6 ADP 1391 A 1 
HETATM 24 N N1 ADP . . . D 2 -30.506 14.69 7.093 1 46.21 ? N1 ADP 1391 A 1 
HETATM 25 C C2 ADP . . . D 2 -30.513 13.376 7.413 1 46.27 ? C2 ADP 1391 A 1 
HETATM 26 N N3 ADP . . . D 2 -30.117 12.9 8.608 1 52.18 ? N3 ADP 1391 A 1 
HETATM 27 C C4 ADP . . . D 2 -29.674 13.757 9.562 1 49.43 ? C4 ADP 1391 A 1 
#
_model_server_stats.io_time_ms              6 
_model_server_stats.parse_time_ms           6 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           274 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           27 
#