data_2WRX # _model_server_result.job_id oMZDESI9FpkolaGWsRn57Q _model_server_result.datetime_utc '2024-11-20 00:43:49' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2wrx # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":2000}' # _entry.id 2WRX # _exptl.entry_id 2WRX _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 22.99 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SODIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2WRX _cell.length_a 39.239 _cell.length_b 39.239 _cell.length_c 124.908 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2WRX _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 6 A CYS 6 1_555 A SG CYS 11 A CYS 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.049 ? disulf ? disulf2 A SG CYS 7 A CYS 7 1_555 B SG CYS 7 B CYS 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.091 ? disulf ? disulf3 A SG CYS 20 A CYS 20 1_555 B SG CYS 19 B CYS 19 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.016 ? disulf ? disulf4 C SG CYS 6 C CYS 6 1_555 C SG CYS 11 C CYS 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.081 ? disulf ? disulf5 C SG CYS 7 C CYS 7 1_555 D SG CYS 7 D CYS 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.06 ? disulf ? disulf6 C SG CYS 20 C CYS 20 1_555 D SG CYS 19 D CYS 19 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.017 ? covale ? covale1 B C PHE 25 B PHE 25 1_555 B N MAA 26 B MAA 26 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.337 ? covale ? covale2 B C MAA 26 B MAA 26 1_555 B N THR 27 B THR 27 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.321 ? covale ? covale3 D C PHE 25 D PHE 25 1_555 D N MAA 26 D MAA 26 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.345 ? covale ? covale4 D C MAA 26 D MAA 26 1_555 D N THR 27 D THR 27 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? metalc ? metalc1 E NA NA . A NA 2000 1_555 F O HOH . A HOH 2001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.144 ? metalc ? metalc2 E NA NA . A NA 2000 1_555 G O HOH . B HOH 2019 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.058 ? metalc ? metalc3 E NA NA . A NA 2000 1_555 I O HOH . D HOH 2026 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.62 ? # _chem_comp.formula 'Na 1' _chem_comp.formula_weight 22.99 _chem_comp.id NA _chem_comp.mon_nstd_flag . _chem_comp.name 'SODIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 2WRX _atom_sites.fract_transf_matrix[1][1] 0.025485 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.025485 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008006 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 NA A 1 2000 2000 NA NA . F 4 HOH A 1 2001 2001 HOH HOH . F 4 HOH A 2 2002 2002 HOH HOH . F 4 HOH A 3 2003 2003 HOH HOH . F 4 HOH A 4 2004 2004 HOH HOH . F 4 HOH A 5 2005 2005 HOH HOH . F 4 HOH A 6 2006 2006 HOH HOH . F 4 HOH A 7 2007 2007 HOH HOH . F 4 HOH A 8 2008 2008 HOH HOH . F 4 HOH A 9 2009 2009 HOH HOH . F 4 HOH A 10 2010 2010 HOH HOH . F 4 HOH A 11 2011 2011 HOH HOH . F 4 HOH A 12 2012 2012 HOH HOH . F 4 HOH A 13 2013 2013 HOH HOH . F 4 HOH A 14 2014 2014 HOH HOH . F 4 HOH A 15 2015 2015 HOH HOH . F 4 HOH A 16 2016 2016 HOH HOH . F 4 HOH A 17 2017 2017 HOH HOH . F 4 HOH A 18 2018 2018 HOH HOH . F 4 HOH A 19 2019 2019 HOH HOH . F 4 HOH A 20 2020 2020 HOH HOH . F 4 HOH A 21 2021 2021 HOH HOH . F 4 HOH A 22 2022 2022 HOH HOH . F 4 HOH A 23 2023 2023 HOH HOH . F 4 HOH A 24 2024 2024 HOH HOH . F 4 HOH A 25 2025 2025 HOH HOH . G 4 HOH B 1 2001 2001 HOH HOH . G 4 HOH B 2 2002 2002 HOH HOH . G 4 HOH B 3 2003 2003 HOH HOH . G 4 HOH B 4 2004 2004 HOH HOH . G 4 HOH B 5 2005 2005 HOH HOH . G 4 HOH B 6 2006 2006 HOH HOH . G 4 HOH B 7 2007 2007 HOH HOH . G 4 HOH B 8 2008 2008 HOH HOH . G 4 HOH B 9 2009 2009 HOH HOH . G 4 HOH B 10 2010 2010 HOH HOH . G 4 HOH B 11 2011 2011 HOH HOH . G 4 HOH B 12 2012 2012 HOH HOH . G 4 HOH B 13 2013 2013 HOH HOH . G 4 HOH B 14 2014 2014 HOH HOH . G 4 HOH B 15 2015 2015 HOH HOH . G 4 HOH B 16 2016 2016 HOH HOH . G 4 HOH B 17 2017 2017 HOH HOH . G 4 HOH B 18 2018 2018 HOH HOH . G 4 HOH B 19 2019 2019 HOH HOH . G 4 HOH B 20 2020 2020 HOH HOH . G 4 HOH B 21 2021 2021 HOH HOH . G 4 HOH B 22 2022 2022 HOH HOH . H 4 HOH C 1 2001 2001 HOH HOH . H 4 HOH C 2 2002 2002 HOH HOH . H 4 HOH C 3 2003 2003 HOH HOH . H 4 HOH C 4 2004 2004 HOH HOH . H 4 HOH C 5 2005 2005 HOH HOH . H 4 HOH C 6 2006 2006 HOH HOH . H 4 HOH C 7 2007 2007 HOH HOH . H 4 HOH C 8 2008 2008 HOH HOH . H 4 HOH C 9 2009 2009 HOH HOH . H 4 HOH C 10 2010 2010 HOH HOH . H 4 HOH C 11 2011 2011 HOH HOH . H 4 HOH C 12 2012 2012 HOH HOH . H 4 HOH C 13 2013 2013 HOH HOH . H 4 HOH C 14 2014 2014 HOH HOH . H 4 HOH C 15 2015 2015 HOH HOH . H 4 HOH C 16 2016 2016 HOH HOH . H 4 HOH C 17 2017 2017 HOH HOH . H 4 HOH C 18 2018 2018 HOH HOH . H 4 HOH C 19 2019 2019 HOH HOH . H 4 HOH C 20 2020 2020 HOH HOH . H 4 HOH C 21 2021 2021 HOH HOH . H 4 HOH C 22 2022 2022 HOH HOH . H 4 HOH C 23 2023 2023 HOH HOH . H 4 HOH C 24 2024 2024 HOH HOH . I 4 HOH D 1 2001 2001 HOH HOH . I 4 HOH D 2 2002 2002 HOH HOH . I 4 HOH D 3 2003 2003 HOH HOH . I 4 HOH D 4 2004 2004 HOH HOH . I 4 HOH D 5 2005 2005 HOH HOH . I 4 HOH D 6 2006 2006 HOH HOH . I 4 HOH D 7 2007 2007 HOH HOH . I 4 HOH D 8 2008 2008 HOH HOH . I 4 HOH D 9 2009 2009 HOH HOH . I 4 HOH D 10 2010 2010 HOH HOH . I 4 HOH D 11 2011 2011 HOH HOH . I 4 HOH D 12 2012 2012 HOH HOH . I 4 HOH D 13 2013 2013 HOH HOH . I 4 HOH D 14 2014 2014 HOH HOH . I 4 HOH D 15 2015 2015 HOH HOH . I 4 HOH D 16 2016 2016 HOH HOH . I 4 HOH D 17 2017 2017 HOH HOH . I 4 HOH D 18 2018 2018 HOH HOH . I 4 HOH D 19 2019 2019 HOH HOH . I 4 HOH D 20 2020 2020 HOH HOH . I 4 HOH D 21 2021 2021 HOH HOH . I 4 HOH D 22 2022 2022 HOH HOH . I 4 HOH D 23 2023 2023 HOH HOH . I 4 HOH D 24 2024 2024 HOH HOH . I 4 HOH D 25 2025 2025 HOH HOH . I 4 HOH D 26 2026 2026 HOH HOH . I 4 HOH D 27 2027 2027 HOH HOH . I 4 HOH D 28 2028 2028 HOH HOH . I 4 HOH D 29 2029 2029 HOH HOH . I 4 HOH D 30 2030 2030 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol NA _atom_site.label_atom_id NA _atom_site.label_comp_id NA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id E _atom_site.label_entity_id 3 _atom_site.Cartn_x 3.121 _atom_site.Cartn_y 18.88 _atom_site.Cartn_z 16.061 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 35.42 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id NA _atom_site.auth_comp_id NA _atom_site.auth_seq_id 2000 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 53 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 308 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 1 #