data_2WS7 # _model_server_result.job_id heRydILaOFesm9HZgPDkVg _model_server_result.datetime_utc '2024-11-20 00:24:37' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2ws7 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"S","auth_seq_id":1021}' # _entry.id 2WS7 # _exptl.entry_id 2WS7 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 94.111 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description PHENOL _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2WS7 _cell.length_a 62.451 _cell.length_b 66.511 _cell.length_c 57.297 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2WS7 _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dodecameric _pdbx_struct_assembly.oligomeric_count 12 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 M N N ? 3 P N N ? 3 S N N ? 3 T N N ? 3 U N N ? 3 V N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 6 A CYS 6 1_555 A SG CYS 11 A CYS 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.019 ? disulf ? disulf2 A SG CYS 7 A CYS 7 1_555 B SG CYS 7 B CYS 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? disulf ? disulf3 A SG CYS 20 A CYS 20 1_555 B SG CYS 19 B CYS 19 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? disulf ? disulf4 C SG CYS 6 C CYS 6 1_555 C SG CYS 11 C CYS 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? disulf ? disulf5 C SG CYS 7 C CYS 7 1_555 D SG CYS 7 D CYS 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.045 ? disulf ? disulf6 C SG CYS 20 C CYS 20 1_555 D SG CYS 19 D CYS 19 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.064 ? disulf ? disulf7 E SG CYS 6 E CYS 6 1_555 E SG CYS 11 E CYS 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? disulf ? disulf8 E SG CYS 7 E CYS 7 1_555 F SG CYS 7 F CYS 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.045 ? disulf ? disulf9 E SG CYS 20 E CYS 20 1_555 F SG CYS 19 F CYS 19 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.044 ? disulf ? disulf10 G SG CYS 6 G CYS 6 1_555 G SG CYS 11 G CYS 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? disulf ? disulf11 G SG CYS 7 G CYS 7 1_555 H SG CYS 7 H CYS 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf12 G SG CYS 20 G CYS 20 1_555 H SG CYS 19 H CYS 19 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.044 ? disulf ? disulf13 I SG CYS 6 I CYS 6 1_555 I SG CYS 11 I CYS 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? disulf ? disulf14 I SG CYS 7 I CYS 7 1_555 J SG CYS 7 J CYS 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.068 ? disulf ? disulf15 I SG CYS 20 I CYS 20 1_555 J SG CYS 19 J CYS 19 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? disulf ? disulf16 K SG CYS 6 K CYS 6 1_555 K SG CYS 11 K CYS 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.021 ? disulf ? disulf17 K SG CYS 7 K CYS 7 1_555 L SG CYS 7 L CYS 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.046 ? disulf ? disulf18 K SG CYS 20 K CYS 20 1_555 L SG CYS 19 L CYS 19 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.048 ? metalc ? metalc1 B NE2 HIS 10 B HIS 10 1_555 N ZN ZN . B ZN 1020 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.056 ? metalc ? metalc2 N ZN ZN . B ZN 1020 1_555 O CL CL . B CL 1021 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.068 ? metalc ? metalc3 N ZN ZN . B ZN 1020 1_555 F NE2 HIS 10 F HIS 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? metalc ? metalc4 N ZN ZN . B ZN 1020 1_555 J NE2 HIS 10 J HIS 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? metalc ? metalc5 D NE2 HIS 10 D HIS 10 1_555 Q ZN ZN . D ZN 1024 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.011 ? metalc ? metalc6 Q ZN ZN . D ZN 1024 1_555 R CL CL . D CL 1025 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.091 ? metalc ? metalc7 Q ZN ZN . D ZN 1024 1_555 H NE2 HIS 10 H HIS 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.018 ? metalc ? metalc8 Q ZN ZN . D ZN 1024 1_555 L NE2 HIS 10 L HIS 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.97 ? # _chem_comp.formula 'C6 H6 O' _chem_comp.formula_weight 94.111 _chem_comp.id IPH _chem_comp.mon_nstd_flag . _chem_comp.name PHENOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 IPH doub 158 n y C1 C6 IPH sing 159 n y C1 O1 IPH sing 160 n n C2 C3 IPH sing 161 n y C2 H2 IPH sing 162 n n C3 C4 IPH doub 163 n y C3 H3 IPH sing 164 n n C4 C5 IPH sing 165 n y C4 H4 IPH sing 166 n n C5 C6 IPH doub 167 n y C5 H5 IPH sing 168 n n C6 H6 IPH sing 169 n n O1 HO1 IPH sing 170 n n # _atom_sites.entry_id 2WS7 _atom_sites.fract_transf_matrix[1][1] 0.016013 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015035 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.017453 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code M 3 IPH A 1 1022 1022 IPH IPH . N 4 ZN B 1 1020 1020 ZN ZN . O 5 CL B 1 1021 1021 CL CL . P 3 IPH C 1 1022 1022 IPH IPH . Q 4 ZN D 1 1024 1024 ZN ZN . R 5 CL D 1 1025 1025 CL CL . S 3 IPH E 1 1021 1021 IPH IPH . T 3 IPH G 1 1022 1022 IPH IPH . U 3 IPH I 1 1022 1022 IPH IPH . V 3 IPH K 1 1021 1021 IPH IPH . W 6 HOH A 1 2001 2001 HOH HOH . W 6 HOH A 2 2002 2002 HOH HOH . W 6 HOH A 3 2003 2003 HOH HOH . X 6 HOH B 1 2001 2001 HOH HOH . X 6 HOH B 2 2002 2002 HOH HOH . X 6 HOH B 3 2003 2003 HOH HOH . Y 6 HOH C 1 2001 2001 HOH HOH . Y 6 HOH C 2 2002 2002 HOH HOH . Y 6 HOH C 3 2003 2003 HOH HOH . Y 6 HOH C 4 2004 2004 HOH HOH . Z 6 HOH D 1 2001 2001 HOH HOH . Z 6 HOH D 2 2002 2002 HOH HOH . Z 6 HOH D 3 2003 2003 HOH HOH . Z 6 HOH D 4 2004 2004 HOH HOH . Z 6 HOH D 5 2005 2005 HOH HOH . Z 6 HOH D 6 2006 2006 HOH HOH . AA 6 HOH E 1 2001 2001 HOH HOH . AA 6 HOH E 2 2002 2002 HOH HOH . AA 6 HOH E 3 2003 2003 HOH HOH . BA 6 HOH F 1 2001 2001 HOH HOH . BA 6 HOH F 2 2002 2002 HOH HOH . BA 6 HOH F 3 2003 2003 HOH HOH . BA 6 HOH F 4 2004 2004 HOH HOH . CA 6 HOH G 1 2001 2001 HOH HOH . CA 6 HOH G 2 2002 2002 HOH HOH . CA 6 HOH G 3 2003 2003 HOH HOH . CA 6 HOH G 4 2004 2004 HOH HOH . CA 6 HOH G 5 2005 2005 HOH HOH . DA 6 HOH H 1 2001 2001 HOH HOH . DA 6 HOH H 2 2002 2002 HOH HOH . EA 6 HOH I 1 2001 2001 HOH HOH . EA 6 HOH I 2 2002 2002 HOH HOH . EA 6 HOH I 3 2003 2003 HOH HOH . FA 6 HOH J 1 2001 2001 HOH HOH . FA 6 HOH J 2 2002 2002 HOH HOH . FA 6 HOH J 3 2003 2003 HOH HOH . GA 6 HOH K 1 2001 2001 HOH HOH . GA 6 HOH K 2 2002 2002 HOH HOH . GA 6 HOH K 3 2003 2003 HOH HOH . GA 6 HOH K 4 2004 2004 HOH HOH . HA 6 HOH L 1 2001 2001 HOH HOH . HA 6 HOH L 2 2002 2002 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 IPH . . . S 3 -16.74 -7.047 -22.752 1 36.13 ? C1 IPH 1021 E 1 HETATM 2 C C2 IPH . . . S 3 -17.441 -8.119 -22.224 1 34.62 ? C2 IPH 1021 E 1 HETATM 3 C C3 IPH . . . S 3 -16.774 -9.032 -21.403 1 36.55 ? C3 IPH 1021 E 1 HETATM 4 C C4 IPH . . . S 3 -15.412 -8.903 -21.107 1 34.58 ? C4 IPH 1021 E 1 HETATM 5 C C5 IPH . . . S 3 -14.712 -7.825 -21.641 1 35.7 ? C5 IPH 1021 E 1 HETATM 6 C C6 IPH . . . S 3 -15.375 -6.901 -22.459 1 36.42 ? C6 IPH 1021 E 1 HETATM 7 O O1 IPH . . . S 3 -17.383 -6.135 -23.557 1 37.42 ? O1 IPH 1021 E 1 # _model_server_stats.io_time_ms 23 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 27 _model_server_stats.query_time_ms 319 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 7 #