data_2WTH
#
_model_server_result.job_id            CPXTJseHby2N9Rg6Zdo9Kg 
_model_server_result.datetime_utc      '2025-07-23 22:59:06' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2wth 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":161}' 
#
_entry.id    2WTH 
#
_exptl.entry_id    2WTH 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              31.999 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'OXYGEN MOLECULE' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            2WTH 
_cell.length_a            77.681 
_cell.length_b            77.681 
_cell.length_c            145.64 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 2WTH 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        152 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 31 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 D N N 
? 3 I N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A NE2 HIS 101 A HIS 101 1_555 C FE HEM . A HEM 160 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.165 ? 
metalc ? metalc2 C FE HEM . A HEM 160 1_555 D O2 OXY . A OXY 161 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.365 ? 
metalc ? metalc3 B NE2 HIS 101 B HIS 101 1_555 H FE HEM . B HEM 160 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.048 ? 
metalc ? metalc4 H FE HEM . B HEM 160 1_555 I O2 OXY . B OXY 161 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.256 ? 
#
_chem_comp.formula           O2 
_chem_comp.formula_weight    31.999 
_chem_comp.id                OXY 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'OXYGEN MOLECULE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_chem_comp_bond.atom_id_1             O1 
_chem_comp_bond.atom_id_2             O2 
_chem_comp_bond.comp_id               OXY 
_chem_comp_bond.value_order           doub 
_chem_comp_bond.pdbx_ordinal          332 
_chem_comp_bond.pdbx_stereo_config    n 
_chem_comp_bond.pdbx_aromatic_flag    n 
#
_atom_sites.entry_id                     2WTH 
_atom_sites.fract_transf_matrix[1][1]    0.012873 
_atom_sites.fract_transf_matrix[1][2]    0.007432 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.014865 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.006866 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 HEM A 1 160 160 HEM HEM . 
D 3 OXY A 1 161 161 OXY OXY . 
E 4 SO4 A 1 1160 1160 SO4 SO4 . 
F 5 GOL A 1 1161 1161 GOL GOL . 
G 5 GOL A 1 1162 1162 GOL GOL . 
H 2 HEM B 1 160 160 HEM HEM . 
I 3 OXY B 1 161 161 OXY OXY . 
J 4 SO4 B 1 1160 1160 SO4 SO4 . 
K 5 GOL B 1 1161 1161 GOL GOL . 
L 5 GOL B 1 1162 1162 GOL GOL . 
M 4 SO4 B 1 1163 1163 SO4 SO4 . 
N 5 GOL B 1 1164 1164 GOL GOL . 
O 5 GOL B 1 1165 1165 GOL GOL . 
P 6 HOH A 1 2001 2001 HOH HOH . 
P 6 HOH A 2 2002 2002 HOH HOH . 
P 6 HOH A 3 2003 2003 HOH HOH . 
P 6 HOH A 4 2004 2004 HOH HOH . 
P 6 HOH A 5 2005 2005 HOH HOH . 
P 6 HOH A 6 2006 2006 HOH HOH . 
P 6 HOH A 7 2007 2007 HOH HOH . 
P 6 HOH A 8 2008 2008 HOH HOH . 
P 6 HOH A 9 2009 2009 HOH HOH . 
P 6 HOH A 10 2010 2010 HOH HOH . 
P 6 HOH A 11 2011 2011 HOH HOH . 
P 6 HOH A 12 2012 2012 HOH HOH . 
P 6 HOH A 13 2013 2013 HOH HOH . 
P 6 HOH A 14 2014 2014 HOH HOH . 
P 6 HOH A 15 2015 2015 HOH HOH . 
P 6 HOH A 16 2016 2016 HOH HOH . 
P 6 HOH A 17 2017 2017 HOH HOH . 
P 6 HOH A 18 2018 2018 HOH HOH . 
P 6 HOH A 19 2019 2019 HOH HOH . 
P 6 HOH A 20 2020 2020 HOH HOH . 
P 6 HOH A 21 2021 2021 HOH HOH . 
Q 6 HOH B 1 2001 2001 HOH HOH . 
Q 6 HOH B 2 2002 2002 HOH HOH . 
Q 6 HOH B 3 2003 2003 HOH HOH . 
Q 6 HOH B 4 2004 2004 HOH HOH . 
Q 6 HOH B 5 2005 2005 HOH HOH . 
Q 6 HOH B 6 2006 2006 HOH HOH . 
Q 6 HOH B 7 2007 2007 HOH HOH . 
Q 6 HOH B 8 2008 2008 HOH HOH . 
Q 6 HOH B 9 2009 2009 HOH HOH . 
Q 6 HOH B 10 2010 2010 HOH HOH . 
Q 6 HOH B 11 2011 2011 HOH HOH . 
Q 6 HOH B 12 2012 2012 HOH HOH . 
Q 6 HOH B 13 2013 2013 HOH HOH . 
Q 6 HOH B 14 2014 2014 HOH HOH . 
Q 6 HOH B 15 2015 2015 HOH HOH . 
Q 6 HOH B 16 2016 2016 HOH HOH . 
Q 6 HOH B 17 2017 2017 HOH HOH . 
Q 6 HOH B 18 2018 2018 HOH HOH . 
Q 6 HOH B 19 2019 2019 HOH HOH . 
Q 6 HOH B 20 2020 2020 HOH HOH . 
Q 6 HOH B 21 2021 2021 HOH HOH . 
Q 6 HOH B 22 2022 2022 HOH HOH . 
Q 6 HOH B 23 2023 2023 HOH HOH . 
Q 6 HOH B 24 2024 2024 HOH HOH . 
Q 6 HOH B 25 2025 2025 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 O O1 OXY . . . D 3 26.78 -18.144 -5.626 1 66.83 ? O1 OXY 161 A 1 
HETATM 2 O O2 OXY . . . D 3 26.356 -18.977 -4.862 1 65.58 ? O2 OXY 161 A 1 
#
_model_server_stats.io_time_ms              5 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    25 
_model_server_stats.query_time_ms           288 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           2 
#