data_2WVK # _model_server_result.job_id 3aefukavt_lT0IHjSb2etw _model_server_result.datetime_utc '2024-11-02 01:17:51' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2wvk # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":1394}' # _entry.id 2WVK # _exptl.entry_id 2WVK _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2WVK _cell.length_a 113.456 _cell.length_b 113.456 _cell.length_c 195.982 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2WVK _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 E N N ? 3 F N N ? 3 G N N ? 3 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A ND1 HIS 8 A HIS 8 1_555 D ZN ZN . A ZN 1393 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.174 ? metalc ? metalc2 A OE1 GLU 19 A GLU 19 1_555 D ZN ZN . A ZN 1393 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.597 ? metalc ? metalc3 A OE2 GLU 19 A GLU 19 1_555 D ZN ZN . A ZN 1393 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.058 ? metalc ? metalc4 A OE1 GLU 251 A GLU 251 1_555 E ZN ZN . A ZN 1394 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.965 ? metalc ? metalc5 A OE1 GLU 292 A GLU 292 5_555 H ZN ZN . B ZN 1394 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.157 ? metalc ? metalc6 A OE2 GLU 292 A GLU 292 5_555 H ZN ZN . B ZN 1394 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.581 ? metalc ? metalc7 A NE2 HIS 296 A HIS 296 5_555 H ZN ZN . B ZN 1394 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.058 ? metalc ? metalc8 A ND1 HIS 309 A HIS 309 1_555 E ZN ZN . A ZN 1394 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.093 ? metalc ? metalc9 A NE2 HIS 311 A HIS 311 1_555 E ZN ZN . A ZN 1394 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.171 ? metalc ? metalc10 D ZN ZN . A ZN 1393 1_555 I O HOH . A HOH 2043 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.464 ? metalc ? metalc11 D ZN ZN . A ZN 1393 1_555 B NE2 HIS 105 B HIS 105 8_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.114 ? metalc ? metalc12 E ZN ZN . A ZN 1394 1_555 I O HOH . A HOH 2044 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.584 ? metalc ? metalc13 B NE2 HIS 8 B HIS 8 1_555 F ZN ZN . B ZN 1392 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.16 ? metalc ? metalc14 B OE2 GLU 19 B GLU 19 1_555 F ZN ZN . B ZN 1392 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.911 ? metalc ? metalc15 B OD1 ASP 242 B ASP 242 1_555 F ZN ZN . B ZN 1392 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.076 ? metalc ? metalc16 B OD2 ASP 242 B ASP 242 1_555 F ZN ZN . B ZN 1392 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.483 ? metalc ? metalc17 B OE1 GLU 251 B GLU 251 1_555 G ZN ZN . B ZN 1393 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.075 ? metalc ? metalc18 B OE1 GLU 292 B GLU 292 1_555 H ZN ZN . B ZN 1394 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.001 ? metalc ? metalc19 B NE2 HIS 296 B HIS 296 1_555 H ZN ZN . B ZN 1394 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.014 ? metalc ? metalc20 B ND1 HIS 309 B HIS 309 1_555 G ZN ZN . B ZN 1393 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.16 ? metalc ? metalc21 B NE2 HIS 311 B HIS 311 1_555 G ZN ZN . B ZN 1393 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.317 ? metalc ? metalc22 F ZN ZN . B ZN 1392 1_555 J O HOH . B HOH 2029 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.543 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 2WVK _atom_sites.fract_transf_matrix[1][1] 0.008814 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008814 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005103 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 FLC A 1 1392 1392 FLC FLC . D 3 ZN A 1 1393 1393 ZN ZN . E 3 ZN A 1 1394 1394 ZN ZN . F 3 ZN B 1 1392 1392 ZN ZN . G 3 ZN B 1 1393 1393 ZN ZN . H 3 ZN B 1 1394 1394 ZN ZN . I 4 HOH A 1 2001 2001 HOH HOH . I 4 HOH A 2 2002 2002 HOH HOH . I 4 HOH A 3 2003 2003 HOH HOH . I 4 HOH A 4 2004 2004 HOH HOH . I 4 HOH A 5 2005 2005 HOH HOH . I 4 HOH A 6 2006 2006 HOH HOH . I 4 HOH A 7 2007 2007 HOH HOH . I 4 HOH A 8 2008 2008 HOH HOH . I 4 HOH A 9 2009 2009 HOH HOH . I 4 HOH A 10 2010 2010 HOH HOH . I 4 HOH A 11 2011 2011 HOH HOH . I 4 HOH A 12 2012 2012 HOH HOH . I 4 HOH A 13 2013 2013 HOH HOH . I 4 HOH A 14 2014 2014 HOH HOH . I 4 HOH A 15 2015 2015 HOH HOH . I 4 HOH A 16 2016 2016 HOH HOH . I 4 HOH A 17 2017 2017 HOH HOH . I 4 HOH A 18 2018 2018 HOH HOH . I 4 HOH A 19 2019 2019 HOH HOH . I 4 HOH A 20 2020 2020 HOH HOH . I 4 HOH A 21 2021 2021 HOH HOH . I 4 HOH A 22 2022 2022 HOH HOH . I 4 HOH A 23 2023 2023 HOH HOH . I 4 HOH A 24 2024 2024 HOH HOH . I 4 HOH A 25 2025 2025 HOH HOH . I 4 HOH A 26 2026 2026 HOH HOH . I 4 HOH A 27 2027 2027 HOH HOH . I 4 HOH A 28 2028 2028 HOH HOH . I 4 HOH A 29 2029 2029 HOH HOH . I 4 HOH A 30 2030 2030 HOH HOH . I 4 HOH A 31 2031 2031 HOH HOH . I 4 HOH A 32 2032 2032 HOH HOH . I 4 HOH A 33 2033 2033 HOH HOH . I 4 HOH A 34 2034 2034 HOH HOH . I 4 HOH A 35 2035 2035 HOH HOH . I 4 HOH A 36 2036 2036 HOH HOH . I 4 HOH A 37 2037 2037 HOH HOH . I 4 HOH A 38 2038 2038 HOH HOH . I 4 HOH A 39 2039 2039 HOH HOH . I 4 HOH A 40 2040 2040 HOH HOH . I 4 HOH A 41 2041 2041 HOH HOH . I 4 HOH A 42 2042 2042 HOH HOH . I 4 HOH A 43 2043 2043 HOH HOH . I 4 HOH A 44 2044 2044 HOH HOH . I 4 HOH A 45 2045 2045 HOH HOH . J 4 HOH B 1 2001 2001 HOH HOH . J 4 HOH B 2 2002 2002 HOH HOH . J 4 HOH B 3 2003 2003 HOH HOH . J 4 HOH B 4 2004 2004 HOH HOH . J 4 HOH B 5 2005 2005 HOH HOH . J 4 HOH B 6 2006 2006 HOH HOH . J 4 HOH B 7 2007 2007 HOH HOH . J 4 HOH B 8 2008 2008 HOH HOH . J 4 HOH B 9 2009 2009 HOH HOH . J 4 HOH B 10 2010 2010 HOH HOH . J 4 HOH B 11 2011 2011 HOH HOH . J 4 HOH B 12 2012 2012 HOH HOH . J 4 HOH B 13 2013 2013 HOH HOH . J 4 HOH B 14 2014 2014 HOH HOH . J 4 HOH B 15 2015 2015 HOH HOH . J 4 HOH B 16 2016 2016 HOH HOH . J 4 HOH B 17 2017 2017 HOH HOH . J 4 HOH B 18 2018 2018 HOH HOH . J 4 HOH B 19 2019 2019 HOH HOH . J 4 HOH B 20 2020 2020 HOH HOH . J 4 HOH B 21 2021 2021 HOH HOH . J 4 HOH B 22 2022 2022 HOH HOH . J 4 HOH B 23 2023 2023 HOH HOH . J 4 HOH B 24 2024 2024 HOH HOH . J 4 HOH B 25 2025 2025 HOH HOH . J 4 HOH B 26 2026 2026 HOH HOH . J 4 HOH B 27 2027 2027 HOH HOH . J 4 HOH B 28 2028 2028 HOH HOH . J 4 HOH B 29 2029 2029 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id E _atom_site.label_entity_id 3 _atom_site.Cartn_x -0.031 _atom_site.Cartn_y -15.676 _atom_site.Cartn_z 26.635 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 92.62 _atom_site.pdbx_formal_charge 2 _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 1394 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 17 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 270 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #