data_2WXN # _model_server_result.job_id 8XyPlxoH1T1yKPw5scHupg _model_server_result.datetime_utc '2025-03-12 06:49:28' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2wxn # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1500}' # _entry.id 2WXN # _exptl.entry_id 2WXN _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 293.323 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 3-{[4-amino-1-(1-methylethyl)-1H-pyrazolo[3,4-d]pyrimidin-3-yl]ethynyl}phenol _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 103.43 _cell.angle_gamma 90 _cell.entry_id 2WXN _cell.length_a 143.42 _cell.length_b 64.63 _cell.length_c 117.5 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2WXN _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C16 H15 N5 O' _chem_comp.formula_weight 293.323 _chem_comp.id DLN _chem_comp.mon_nstd_flag . _chem_comp.name 3-{[4-amino-1-(1-methylethyl)-1H-pyrazolo[3,4-d]pyrimidin-3-yl]ethynyl}phenol _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C20 C19 DLN sing 83 n n C19 C21 DLN sing 84 n n C19 N7 DLN sing 85 n n N7 N8 DLN sing 86 n y N7 C3 DLN sing 87 n y N8 CAI DLN doub 88 n y C3 N2 DLN sing 89 n y C3 C4 DLN doub 90 n y N2 C1 DLN doub 91 n y C1 N6 DLN sing 92 n y N6 C5 DLN doub 93 n y C5 N10 DLN sing 94 n n C5 C4 DLN sing 95 n y C4 CAI DLN sing 96 n y C11 C12 DLN sing 97 n n C11 CAM DLN trip 98 n n C12 C13 DLN sing 99 n y C12 C17 DLN doub 100 n y C13 C14 DLN doub 101 n y C17 C16 DLN sing 102 n y C16 C15 DLN doub 103 n y C15 C14 DLN sing 104 n y C14 O18 DLN sing 105 n n CAI CAM DLN sing 106 n n C20 H201 DLN sing 107 n n C20 H202 DLN sing 108 n n C20 H203 DLN sing 109 n n C19 H19 DLN sing 110 n n C21 H211 DLN sing 111 n n C21 H212 DLN sing 112 n n C21 H213 DLN sing 113 n n C1 H1 DLN sing 114 n n N10 H101 DLN sing 115 n n N10 H102 DLN sing 116 n n C13 H13 DLN sing 117 n n C17 H17 DLN sing 118 n n C16 H16 DLN sing 119 n n C15 H15 DLN sing 120 n n O18 H18 DLN sing 121 n n # _atom_sites.entry_id 2WXN _atom_sites.fract_transf_matrix[1][1] 0.006973 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001665 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015473 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00875 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 DLN A 1 1500 1500 DLN DLN . C 3 HOH A 1 2001 2001 HOH HOH . C 3 HOH A 2 2002 2002 HOH HOH . C 3 HOH A 3 2003 2003 HOH HOH . C 3 HOH A 4 2004 2004 HOH HOH . C 3 HOH A 5 2005 2005 HOH HOH . C 3 HOH A 6 2006 2006 HOH HOH . C 3 HOH A 7 2007 2007 HOH HOH . C 3 HOH A 8 2008 2008 HOH HOH . C 3 HOH A 9 2009 2009 HOH HOH . C 3 HOH A 10 2010 2010 HOH HOH . C 3 HOH A 11 2011 2011 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C20 DLN . . . B 2 6.97 -3.032 -23.851 1 25.62 ? C20 DLN 1500 A 1 HETATM 2 C C19 DLN . . . B 2 5.857 -1.97 -23.841 1 27.96 ? C19 DLN 1500 A 1 HETATM 3 C C21 DLN . . . B 2 4.595 -2.414 -24.58 1 32.16 ? C21 DLN 1500 A 1 HETATM 4 N N7 DLN . . . B 2 6.394 -0.671 -24.32 1 23.26 ? N7 DLN 1500 A 1 HETATM 5 N N8 DLN . . . B 2 7.534 -0.328 -23.972 1 24.97 ? N8 DLN 1500 A 1 HETATM 6 C C3 DLN . . . B 2 5.788 0.32 -25.025 1 20.43 ? C3 DLN 1500 A 1 HETATM 7 N N2 DLN . . . B 2 4.565 0.518 -25.579 1 20.34 ? N2 DLN 1500 A 1 HETATM 8 C C1 DLN . . . B 2 4.297 1.66 -26.269 1 22.49 ? C1 DLN 1500 A 1 HETATM 9 N N6 DLN . . . B 2 5.18 2.685 -26.34 1 23.01 ? N6 DLN 1500 A 1 HETATM 10 C C5 DLN . . . B 2 6.405 2.52 -25.772 1 19.28 ? C5 DLN 1500 A 1 HETATM 11 N N10 DLN . . . B 2 7.33 3.424 -25.851 1 18.19 ? N10 DLN 1500 A 1 HETATM 12 C C4 DLN . . . B 2 6.717 1.351 -25.122 1 18.73 ? C4 DLN 1500 A 1 HETATM 13 C C11 DLN . . . B 2 10.073 2.102 -24.105 1 29.05 ? C11 DLN 1500 A 1 HETATM 14 C C12 DLN . . . B 2 11.418 2.53 -24.044 1 30.29 ? C12 DLN 1500 A 1 HETATM 15 C C13 DLN . . . B 2 12.146 2.205 -22.939 1 31.55 ? C13 DLN 1500 A 1 HETATM 16 C C17 DLN . . . B 2 12.005 3.193 -25.125 1 32.02 ? C17 DLN 1500 A 1 HETATM 17 C C16 DLN . . . B 2 13.342 3.606 -25.098 1 29.02 ? C16 DLN 1500 A 1 HETATM 18 C C15 DLN . . . B 2 14.058 3.308 -23.972 1 31.02 ? C15 DLN 1500 A 1 HETATM 19 C C14 DLN . . . B 2 13.472 2.604 -22.906 1 35.26 ? C14 DLN 1500 A 1 HETATM 20 O O18 DLN . . . B 2 14.23 2.293 -21.791 1 40.71 ? O18 DLN 1500 A 1 HETATM 21 C CAI DLN . . . B 2 7.807 0.9 -24.441 1 21.5 ? CAI DLN 1500 A 1 HETATM 22 C CAM DLN . . . B 2 8.998 1.613 -24.26 1 23.78 ? CAM DLN 1500 A 1 # _model_server_stats.io_time_ms 69 _model_server_stats.parse_time_ms 26 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 319 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 22 #