data_2WYJ
#
_model_server_result.job_id            W1vUD3v9RYaRynERXCy-BA 
_model_server_result.datetime_utc      '2025-02-05 14:14:29' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2wyj 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":1244}' 
#
_entry.id    2WYJ 
#
_exptl.entry_id    2WYJ 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              471.996 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            (E)-2-(5-CHLOROTHIOPHEN-2-YL)-N-[(3S)-1-{4-[(1S)-1-(DIMETHYLAMINO)ETHYL]-2-FLUOROPHENYL}-2-OXOPYRROLIDIN-3-YL]ETHENESULFONAMIDE 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            2WYJ 
_cell.length_a            56.564 
_cell.length_b            72.485 
_cell.length_c            78.177 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 2WYJ 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 7 A CYS 22 1_555 A SG CYS 12 A CYS 27 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.05 ? 
disulf ? disulf2 A SG CYS 27 A CYS 42 1_555 A SG CYS 43 A CYS 58 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.048 ? 
disulf ? disulf3 A SG CYS 108 A CYS 122 1_555 B SG CYS 127 B CYS 44 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? 
disulf ? disulf4 A SG CYS 156 A CYS 168 1_555 A SG CYS 170 A CYS 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.021 ? 
disulf ? disulf5 A SG CYS 181 A CYS 191 1_555 A SG CYS 209 A CYS 220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? 
disulf ? disulf6 B SG CYS 84 B CYS 1 1_555 B SG CYS 95 B CYS 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.048 ? 
disulf ? disulf7 B SG CYS 91 B CYS 8 1_555 B SG CYS 104 B CYS 21 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.014 ? 
disulf ? disulf8 B SG CYS 106 B CYS 23 1_555 B SG CYS 119 B CYS 36 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.052 ? 
#
_chem_comp.formula           'C20 H23 Cl F N3 O3 S2' 
_chem_comp.formula_weight    471.996 
_chem_comp.id                898 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              (E)-2-(5-CHLOROTHIOPHEN-2-YL)-N-[(3S)-1-{4-[(1S)-1-(DIMETHYLAMINO)ETHYL]-2-FLUOROPHENYL}-2-OXOPYRROLIDIN-3-YL]ETHENESULFONAMIDE 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
CL1 C1 898 sing 1 n n 
C1 C2 898 doub 2 n y 
C1 S2 898 sing 3 n y 
C2 C3 898 sing 4 n y 
C3 C4 898 doub 5 n y 
S2 C4 898 sing 6 n y 
C4 C5 898 sing 7 n n 
C5 C6 898 doub 8 n n 
C6 S1 898 sing 9 n n 
S1 O2 898 doub 10 e n 
S1 O1 898 doub 11 n n 
S1 N1 898 sing 12 n n 
N1 C12 898 sing 13 n n 
C12 C13 898 sing 14 n n 
C12 C50 898 sing 15 n n 
C13 C14 898 sing 16 n n 
C14 N2 898 sing 17 n n 
C50 O3 898 doub 18 n n 
C50 N2 898 sing 19 n n 
N2 C15 898 sing 20 n n 
C15 C21 898 sing 21 n y 
C15 C22 898 doub 22 n y 
C21 F1 898 sing 23 n n 
C21 C24 898 doub 24 n y 
C22 C26 898 sing 25 n y 
C26 C27 898 doub 26 n y 
C27 C24 898 sing 27 n y 
C27 C28 898 sing 28 n n 
C28 C8 898 sing 29 n n 
C28 N3 898 sing 30 n n 
N3 C9 898 sing 31 n n 
N3 C7 898 sing 32 n n 
C2 H2 898 sing 33 n n 
C3 H3 898 sing 34 n n 
C5 H51C 898 sing 35 n n 
C6 H61C 898 sing 36 n n 
N1 H1 898 sing 37 n n 
C12 H12 898 sing 38 n n 
C13 H131 898 sing 39 n n 
C13 H132 898 sing 40 n n 
C14 H141 898 sing 41 n n 
C14 H142 898 sing 42 n n 
C22 H22 898 sing 43 n n 
C24 H24 898 sing 44 n n 
C26 H26 898 sing 45 n n 
C28 H28 898 sing 46 n n 
C8 H81C 898 sing 47 n n 
C8 H82C 898 sing 48 n n 
C8 H83C 898 sing 49 n n 
C9 H91C 898 sing 50 n n 
C9 H92C 898 sing 51 n n 
C9 H93C 898 sing 52 n n 
C7 H71C 898 sing 53 n n 
C7 H72C 898 sing 54 n n 
C7 H73C 898 sing 55 n n 
#
_atom_sites.entry_id                     2WYJ 
_atom_sites.fract_transf_matrix[1][1]    0.017679 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.013796 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.012791 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 898 A 1 1244 1244 898 898 . 
D 4 HOH A 1 2001 2001 HOH HOH . 
D 4 HOH A 2 2002 2002 HOH HOH . 
D 4 HOH A 3 2003 2003 HOH HOH . 
D 4 HOH A 4 2004 2004 HOH HOH . 
D 4 HOH A 5 2005 2005 HOH HOH . 
D 4 HOH A 6 2006 2006 HOH HOH . 
D 4 HOH A 7 2007 2007 HOH HOH . 
D 4 HOH A 8 2008 2008 HOH HOH . 
D 4 HOH A 9 2009 2009 HOH HOH . 
D 4 HOH A 10 2010 2010 HOH HOH . 
D 4 HOH A 11 2011 2011 HOH HOH . 
D 4 HOH A 12 2012 2012 HOH HOH . 
D 4 HOH A 13 2013 2013 HOH HOH . 
D 4 HOH A 14 2014 2014 HOH HOH . 
D 4 HOH A 15 2015 2015 HOH HOH . 
D 4 HOH A 16 2016 2016 HOH HOH . 
D 4 HOH A 17 2017 2017 HOH HOH . 
D 4 HOH A 18 2018 2018 HOH HOH . 
D 4 HOH A 19 2019 2019 HOH HOH . 
D 4 HOH A 20 2020 2020 HOH HOH . 
D 4 HOH A 21 2021 2021 HOH HOH . 
D 4 HOH A 22 2022 2022 HOH HOH . 
D 4 HOH A 23 2023 2023 HOH HOH . 
D 4 HOH A 24 2024 2024 HOH HOH . 
D 4 HOH A 25 2025 2025 HOH HOH . 
D 4 HOH A 26 2026 2026 HOH HOH . 
D 4 HOH A 27 2027 2027 HOH HOH . 
D 4 HOH A 28 2028 2028 HOH HOH . 
D 4 HOH A 29 2029 2029 HOH HOH . 
D 4 HOH A 30 2030 2030 HOH HOH . 
D 4 HOH A 31 2031 2031 HOH HOH . 
D 4 HOH A 32 2032 2032 HOH HOH . 
D 4 HOH A 33 2033 2033 HOH HOH . 
D 4 HOH A 34 2034 2034 HOH HOH . 
D 4 HOH A 35 2035 2035 HOH HOH . 
D 4 HOH A 36 2036 2036 HOH HOH . 
D 4 HOH A 37 2037 2037 HOH HOH . 
D 4 HOH A 38 2038 2038 HOH HOH . 
D 4 HOH A 39 2039 2039 HOH HOH . 
D 4 HOH A 40 2040 2040 HOH HOH . 
D 4 HOH A 41 2041 2041 HOH HOH . 
D 4 HOH A 42 2042 2042 HOH HOH . 
D 4 HOH A 43 2043 2043 HOH HOH . 
D 4 HOH A 44 2044 2044 HOH HOH . 
D 4 HOH A 45 2045 2045 HOH HOH . 
D 4 HOH A 46 2046 2046 HOH HOH . 
D 4 HOH A 47 2047 2047 HOH HOH . 
D 4 HOH A 48 2048 2048 HOH HOH . 
D 4 HOH A 49 2049 2049 HOH HOH . 
D 4 HOH A 50 2050 2050 HOH HOH . 
D 4 HOH A 51 2051 2051 HOH HOH . 
D 4 HOH A 52 2052 2052 HOH HOH . 
D 4 HOH A 53 2053 2053 HOH HOH . 
D 4 HOH A 54 2054 2054 HOH HOH . 
D 4 HOH A 55 2055 2055 HOH HOH . 
D 4 HOH A 56 2056 2056 HOH HOH . 
D 4 HOH A 57 2057 2057 HOH HOH . 
D 4 HOH A 58 2058 2058 HOH HOH . 
D 4 HOH A 59 2059 2059 HOH HOH . 
D 4 HOH A 60 2060 2060 HOH HOH . 
D 4 HOH A 61 2061 2061 HOH HOH . 
D 4 HOH A 62 2062 2062 HOH HOH . 
D 4 HOH A 63 2063 2063 HOH HOH . 
D 4 HOH A 64 2064 2064 HOH HOH . 
D 4 HOH A 65 2065 2065 HOH HOH . 
D 4 HOH A 66 2066 2066 HOH HOH . 
D 4 HOH A 67 2067 2067 HOH HOH . 
E 4 HOH B 1 2001 2001 HOH HOH . 
E 4 HOH B 2 2002 2002 HOH HOH . 
E 4 HOH B 3 2003 2003 HOH HOH . 
E 4 HOH B 4 2004 2004 HOH HOH . 
E 4 HOH B 5 2005 2005 HOH HOH . 
E 4 HOH B 6 2006 2006 HOH HOH . 
E 4 HOH B 7 2007 2007 HOH HOH . 
E 4 HOH B 8 2008 2008 HOH HOH . 
E 4 HOH B 9 2009 2009 HOH HOH . 
E 4 HOH B 10 2010 2010 HOH HOH . 
E 4 HOH B 11 2011 2011 HOH HOH . 
E 4 HOH B 12 2012 2012 HOH HOH . 
E 4 HOH B 13 2013 2013 HOH HOH . 
E 4 HOH B 14 2014 2014 HOH HOH . 
E 4 HOH B 15 2015 2015 HOH HOH . 
E 4 HOH B 16 2016 2016 HOH HOH . 
E 4 HOH B 17 2017 2017 HOH HOH . 
E 4 HOH B 18 2018 2018 HOH HOH . 
E 4 HOH B 19 2019 2019 HOH HOH . 
E 4 HOH B 20 2020 2020 HOH HOH . 
E 4 HOH B 21 2021 2021 HOH HOH . 
E 4 HOH B 22 2022 2022 HOH HOH . 
E 4 HOH B 23 2023 2023 HOH HOH . 
E 4 HOH B 24 2024 2024 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 CL CL1 898 . . . C 3 13.846 7.203 26.206 1 46.84 ? CL1 898 1244 A 1 
HETATM 2 C C1 898 . . . C 3 12.114 7.322 26.37 1 50.29 ? C1 898 1244 A 1 
HETATM 3 C C2 898 . . . C 3 11.346 6.889 27.404 1 45.98 ? C2 898 1244 A 1 
HETATM 4 C C3 898 . . . C 3 9.957 7.149 27.193 1 47.04 ? C3 898 1244 A 1 
HETATM 5 S S2 898 . . . C 3 11.221 8.053 25.121 1 50.81 ? S2 898 1244 A 1 
HETATM 6 C C4 898 . . . C 3 9.74 7.805 25.936 1 48.43 ? C4 898 1244 A 1 
HETATM 7 C C5 898 . . . C 3 8.448 8.226 25.422 1 49.01 ? C5 898 1244 A 1 
HETATM 8 C C6 898 . . . C 3 8.181 8.658 24.18 1 53.54 ? C6 898 1244 A 1 
HETATM 9 S S1 898 . . . C 3 6.555 9.138 23.813 1 57.41 ? S1 898 1244 A 1 
HETATM 10 O O2 898 . . . C 3 6.621 10.344 23.056 1 53.83 ? O2 898 1244 A 1 
HETATM 11 O O1 898 . . . C 3 5.85 9.108 25.074 1 52.62 ? O1 898 1244 A 1 
HETATM 12 N N1 898 . . . C 3 5.839 8.132 22.758 1 56.07 ? N1 898 1244 A 1 
HETATM 13 C C12 898 . . . C 3 5.852 6.683 22.85 1 58.2 ? C12 898 1244 A 1 
HETATM 14 C C13 898 . . . C 3 4.502 6.054 22.521 1 58.22 ? C13 898 1244 A 1 
HETATM 15 C C14 898 . . . C 3 4.859 4.708 21.869 1 57.75 ? C14 898 1244 A 1 
HETATM 16 C C50 898 . . . C 3 6.783 6.051 21.828 1 57.98 ? C50 898 1244 A 1 
HETATM 17 O O3 898 . . . C 3 7.86 6.472 21.443 1 56.54 ? O3 898 1244 A 1 
HETATM 18 N N2 898 . . . C 3 6.228 4.907 21.394 1 58.8 ? N2 898 1244 A 1 
HETATM 19 C C15 898 . . . C 3 6.913 3.968 20.573 1 56.06 ? C15 898 1244 A 1 
HETATM 20 C C21 898 . . . C 3 7.6 4.367 19.418 1 55.16 ? C21 898 1244 A 1 
HETATM 21 F F1 898 . . . C 3 7.632 5.65 19.066 1 59.22 ? F1 898 1244 A 1 
HETATM 22 C C22 898 . . . C 3 6.877 2.612 20.952 1 55.2 ? C22 898 1244 A 1 
HETATM 23 C C26 898 . . . C 3 7.552 1.688 20.14 1 53.92 ? C26 898 1244 A 1 
HETATM 24 C C27 898 . . . C 3 8.231 2.109 18.973 1 57.44 ? C27 898 1244 A 1 
HETATM 25 C C24 898 . . . C 3 8.259 3.463 18.607 1 57.17 ? C24 898 1244 A 1 
HETATM 26 C C28 898 . . . C 3 8.935 1.118 18.1 1 58.37 ? C28 898 1244 A 1 
HETATM 27 C C8 898 . . . C 3 10.39 1.545 17.844 1 52.34 ? C8 898 1244 A 1 
HETATM 28 N N3 898 . . . C 3 8.189 0.882 16.814 1 59.58 ? N3 898 1244 A 1 
HETATM 29 C C9 898 . . . C 3 6.816 0.38 17.015 1 57.93 ? C9 898 1244 A 1 
HETATM 30 C C7 898 . . . C 3 8.185 1.986 15.816 1 58.78 ? C7 898 1244 A 1 
#
_model_server_stats.io_time_ms              59 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           338 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           30 
#