data_2X0N # _model_server_result.job_id GwkUStFYlnSyfWa09EWhQw _model_server_result.datetime_utc '2024-11-26 01:37:38' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2x0n # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"O","auth_seq_id":361}' # _entry.id 2X0N # _exptl.entry_id 2X0N _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 663.425 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description NICOTINAMIDE-ADENINE-DINUCLEOTIDE _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2X0N _cell.length_a 135.52 _cell.length_b 256.27 _cell.length_c 114.91 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2X0N _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA tetrameric 4 author_and_software_defined_assembly 1 PISA tetrameric 4 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,G,H,I,J,K,L 1 1,2 C,D,E,F,M,N,O,P,Q,R,S,T,U,V,W,X 2 1 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_655 -x+1,-y,z -1 0 0 0 -1 0 0 0 1 135.52 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 I N N ? 3 L N N ? 3 O N N ? 3 R N N ? 3 U N N ? 3 X N N # _chem_comp.formula 'C21 H27 N7 O14 P2' _chem_comp.formula_weight 663.425 _chem_comp.id NAD _chem_comp.mon_nstd_flag . _chem_comp.name NICOTINAMIDE-ADENINE-DINUCLEOTIDE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PA O1A NAD doub 235 n n PA O2A NAD sing 236 n n PA O5B NAD sing 237 n n PA O3 NAD sing 238 n n O2A HOA2 NAD sing 239 n n O5B C5B NAD sing 240 n n C5B C4B NAD sing 241 n n C5B H51A NAD sing 242 n n C5B H52A NAD sing 243 n n C4B O4B NAD sing 244 n n C4B C3B NAD sing 245 n n C4B H4B NAD sing 246 n n O4B C1B NAD sing 247 n n C3B O3B NAD sing 248 n n C3B C2B NAD sing 249 n n C3B H3B NAD sing 250 n n O3B HO3A NAD sing 251 n n C2B O2B NAD sing 252 n n C2B C1B NAD sing 253 n n C2B H2B NAD sing 254 n n O2B HO2A NAD sing 255 n n C1B N9A NAD sing 256 n n C1B H1B NAD sing 257 n n N9A C8A NAD sing 258 n y N9A C4A NAD sing 259 n y C8A N7A NAD doub 260 n y C8A H8A NAD sing 261 n n N7A C5A NAD sing 262 n y C5A C6A NAD sing 263 n y C5A C4A NAD doub 264 n y C6A N6A NAD sing 265 n n C6A N1A NAD doub 266 n y N6A H61A NAD sing 267 n n N6A H62A NAD sing 268 n n N1A C2A NAD sing 269 n y C2A N3A NAD doub 270 n y C2A H2A NAD sing 271 n n N3A C4A NAD sing 272 n y O3 PN NAD sing 273 n n PN O1N NAD doub 274 n n PN O2N NAD sing 275 n n PN O5D NAD sing 276 n n O5D C5D NAD sing 277 n n C5D C4D NAD sing 278 n n C5D H51N NAD sing 279 n n C5D H52N NAD sing 280 n n C4D O4D NAD sing 281 n n C4D C3D NAD sing 282 n n C4D H4D NAD sing 283 n n O4D C1D NAD sing 284 n n C3D O3D NAD sing 285 n n C3D C2D NAD sing 286 n n C3D H3D NAD sing 287 n n O3D HO3N NAD sing 288 n n C2D O2D NAD sing 289 n n C2D C1D NAD sing 290 n n C2D H2D NAD sing 291 n n O2D HO2N NAD sing 292 n n C1D N1N NAD sing 293 n n C1D H1D NAD sing 294 n n N1N C2N NAD sing 295 n y N1N C6N NAD doub 296 n y C2N C3N NAD doub 297 n y C2N H2N NAD sing 298 n n C3N C7N NAD sing 299 n n C3N C4N NAD sing 300 n y C7N O7N NAD doub 301 n n C7N N7N NAD sing 302 n n N7N H71N NAD sing 303 n n N7N H72N NAD sing 304 n n C4N C5N NAD doub 305 n y C4N H4N NAD sing 306 n n C5N C6N NAD sing 307 n y C5N H5N NAD sing 308 n n C6N H6N NAD sing 309 n n # _atom_sites.entry_id 2X0N _atom_sites.fract_transf_matrix[1][1] 0.007379 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.003902 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008702 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 2 SO4 A 1 359 359 SO4 SO4 . H 2 SO4 A 1 360 360 SO4 SO4 . I 3 NAD A 1 361 361 NAD NAD . J 2 SO4 B 1 359 359 SO4 SO4 . K 2 SO4 B 1 360 360 SO4 SO4 . L 3 NAD B 1 361 361 NAD NAD . M 2 SO4 O 1 359 359 SO4 SO4 . N 2 SO4 O 1 360 360 SO4 SO4 . O 3 NAD O 1 361 361 NAD NAD . P 2 SO4 P 1 359 359 SO4 SO4 . Q 2 SO4 P 1 360 360 SO4 SO4 . R 3 NAD P 1 361 361 NAD NAD . S 2 SO4 Q 1 359 359 SO4 SO4 . T 2 SO4 Q 1 360 360 SO4 SO4 . U 3 NAD Q 1 361 361 NAD NAD . V 2 SO4 R 1 359 359 SO4 SO4 . W 2 SO4 R 1 360 360 SO4 SO4 . X 3 NAD R 1 361 361 NAD NAD . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PA NAD . . . O 3 28.61 81.441 10.608 1 17.02 ? PA NAD 361 O 1 HETATM 2 O O1A NAD . . . O 3 28.699 81.346 12.16 1 0 ? O1A NAD 361 O 1 HETATM 3 O O2A NAD . . . O 3 28.174 80.189 9.794 1 14.01 ? O2A NAD 361 O 1 HETATM 4 O O5B NAD . . . O 3 28.543 82.852 9.902 1 65.61 ? O5B NAD 361 O 1 HETATM 5 C C5B NAD . . . O 3 29.522 83.81 10.174 1 64.67 ? C5B NAD 361 O 1 HETATM 6 C C4B NAD . . . O 3 30.762 83.872 9.301 1 63 ? C4B NAD 361 O 1 HETATM 7 O O4B NAD . . . O 3 31.358 85.16 9.236 1 61.78 ? O4B NAD 361 O 1 HETATM 8 C C3B NAD . . . O 3 31.82 82.95 9.803 1 60.06 ? C3B NAD 361 O 1 HETATM 9 O O3B NAD . . . O 3 32.279 82.154 8.783 1 61.69 ? O3B NAD 361 O 1 HETATM 10 C C2B NAD . . . O 3 32.907 83.805 10.223 1 53.62 ? C2B NAD 361 O 1 HETATM 11 O O2B NAD . . . O 3 34.103 83.185 9.953 1 47.5 ? O2B NAD 361 O 1 HETATM 12 C C1B NAD . . . O 3 32.725 84.996 9.341 1 55.3 ? C1B NAD 361 O 1 HETATM 13 N N9A NAD . . . O 3 33.4 86.133 9.916 1 48.66 ? N9A NAD 361 O 1 HETATM 14 C C8A NAD . . . O 3 33.423 86.427 11.224 1 46.03 ? C8A NAD 361 O 1 HETATM 15 N N7A NAD . . . O 3 34.167 87.527 11.393 1 43.86 ? N7A NAD 361 O 1 HETATM 16 C C5A NAD . . . O 3 34.59 87.93 10.195 1 45.73 ? C5A NAD 361 O 1 HETATM 17 C C6A NAD . . . O 3 35.37 89 9.764 1 49.85 ? C6A NAD 361 O 1 HETATM 18 N N6A NAD . . . O 3 35.814 89.937 10.755 1 53.65 ? N6A NAD 361 O 1 HETATM 19 N N1A NAD . . . O 3 35.674 89.14 8.46 1 48.43 ? N1A NAD 361 O 1 HETATM 20 C C2A NAD . . . O 3 35.217 88.235 7.575 1 46.38 ? C2A NAD 361 O 1 HETATM 21 N N3A NAD . . . O 3 34.454 87.186 7.941 1 44.71 ? N3A NAD 361 O 1 HETATM 22 C C4A NAD . . . O 3 34.137 87.022 9.234 1 45.67 ? C4A NAD 361 O 1 HETATM 23 O O3 NAD . . . O 3 27.083 81.674 10.97 1 155.04 ? O3 NAD 361 O 1 HETATM 24 P PN NAD . . . O 3 25.891 81.986 9.983 1 43.27 ? PN NAD 361 O 1 HETATM 25 O O1N NAD . . . O 3 24.725 81.036 10.157 1 45.65 ? O1N NAD 361 O 1 HETATM 26 O O2N NAD . . . O 3 26.348 81.972 8.544 1 43.41 ? O2N NAD 361 O 1 HETATM 27 O O5D NAD . . . O 3 25.347 83.404 10.334 1 46.97 ? O5D NAD 361 O 1 HETATM 28 C C5D NAD . . . O 3 25.656 84.467 9.493 1 47.69 ? C5D NAD 361 O 1 HETATM 29 C C4D NAD . . . O 3 24.598 85.528 9.456 1 47.54 ? C4D NAD 361 O 1 HETATM 30 O O4D NAD . . . O 3 23.55 85.093 8.677 1 47.79 ? O4D NAD 361 O 1 HETATM 31 C C3D NAD . . . O 3 24.082 85.738 10.855 1 45.92 ? C3D NAD 361 O 1 HETATM 32 O O3D NAD . . . O 3 24.239 87.044 11.226 1 50.98 ? O3D NAD 361 O 1 HETATM 33 C C2D NAD . . . O 3 22.666 85.323 10.858 1 37.11 ? C2D NAD 361 O 1 HETATM 34 O O2D NAD . . . O 3 21.883 86.156 11.619 1 23.72 ? O2D NAD 361 O 1 HETATM 35 C C1D NAD . . . O 3 22.287 85.357 9.414 1 44.12 ? C1D NAD 361 O 1 HETATM 36 N N1N NAD . . . O 3 21.07 84.508 8.981 1 47.13 ? N1N NAD 361 O 1 HETATM 37 C C2N NAD . . . O 3 21.09 83.213 9.292 1 47.25 ? C2N NAD 361 O 1 HETATM 38 C C3N NAD . . . O 3 20.05 82.362 8.936 1 44.91 ? C3N NAD 361 O 1 HETATM 39 C C7N NAD . . . O 3 20.136 80.927 9.326 1 36.34 ? C7N NAD 361 O 1 HETATM 40 O O7N NAD . . . O 3 19.348 80.493 10.156 1 32.97 ? O7N NAD 361 O 1 HETATM 41 N N7N NAD . . . O 3 21.324 80.188 8.985 1 32.43 ? N7N NAD 361 O 1 HETATM 42 C C4N NAD . . . O 3 18.966 82.884 8.232 1 49.85 ? C4N NAD 361 O 1 HETATM 43 C C5N NAD . . . O 3 18.976 84.246 7.913 1 52.74 ? C5N NAD 361 O 1 HETATM 44 C C6N NAD . . . O 3 20.056 85.051 8.304 1 50.4 ? C6N NAD 361 O 1 # _model_server_stats.io_time_ms 38 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 20 _model_server_stats.query_time_ms 267 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 44 #