data_2X27
#
_model_server_result.job_id            aCeVQeozvclFRfZAJGHhJw 
_model_server_result.datetime_utc      '2024-12-06 11:52:53' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2x27 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":1215}' 
#
_entry.id    2X27 
#
_exptl.entry_id    2X27 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              58.693 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'NICKEL (II) ION' 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            2X27 
_cell.length_a            52.05 
_cell.length_b            58.38 
_cell.length_c            164.433 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 2X27 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        23 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'I 2 2 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 B N N 
? 2 C N N 
? 2 D N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OD1 ASP 23 X ASP 23 1_555 D NI NI . X NI 1215 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.333 ? 
metalc ? metalc2 A NE2 HIS 162 X HIS 162 1_555 C NI NI . X NI 1214 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.245 ? 
metalc ? metalc3 A OD1 ASP 173 X ASP 173 1_555 B NI NI . X NI 1213 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.338 ? 
metalc ? metalc4 A OD2 ASP 175 X ASP 175 1_555 B NI NI . X NI 1213 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.364 ? 
metalc ? metalc5 A OD2 ASP 198 X ASP 198 1_555 B NI NI . X NI 1213 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.659 ? 
metalc ? metalc6 A OD1 ASP 198 X ASP 198 1_555 B NI NI . X NI 1213 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.492 ? 
metalc ? metalc7 A ND1 HIS 211 X HIS 211 1_555 C NI NI . X NI 1214 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.355 ? 
metalc ? metalc8 B NI NI . X NI 1213 1_555 Q O HOH . X HOH 2099 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.589 ? 
metalc ? metalc9 C NI NI . X NI 1214 1_555 Q O HOH . X HOH 2087 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.57 ? 
metalc ? metalc10 C NI NI . X NI 1214 1_555 Q O HOH . X HOH 2103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.347 ? 
#
_chem_comp.formula           'Ni 2' 
_chem_comp.formula_weight    58.693 
_chem_comp.id                NI 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'NICKEL (II) ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     2X27 
_atom_sites.fract_transf_matrix[1][1]    0.019212 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.017129 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.006082 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 NI X 1 1213 1213 NI NI . 
C 2 NI X 1 1214 1214 NI NI . 
D 2 NI X 1 1215 1215 NI NI . 
E 3 C8E X 1 1216 1216 C8E C8E . 
F 3 C8E X 1 1217 1217 C8E C8E . 
G 3 C8E X 1 1218 1218 C8E C8E . 
H 3 C8E X 1 1219 1219 C8E C8E . 
I 3 C8E X 1 1220 1220 C8E C8E . 
J 3 C8E X 1 1221 1221 C8E C8E . 
K 3 C8E X 1 1222 1222 C8E C8E . 
L 3 C8E X 1 1223 1223 C8E C8E . 
M 3 C8E X 1 1224 1224 C8E C8E . 
N 3 C8E X 1 1225 1225 C8E C8E . 
O 3 C8E X 1 1226 1226 C8E C8E . 
P 3 C8E X 1 1227 1227 C8E C8E . 
Q 4 HOH X 1 2001 2001 HOH HOH . 
Q 4 HOH X 2 2002 2002 HOH HOH . 
Q 4 HOH X 3 2003 2003 HOH HOH . 
Q 4 HOH X 4 2004 2004 HOH HOH . 
Q 4 HOH X 5 2005 2005 HOH HOH . 
Q 4 HOH X 6 2006 2006 HOH HOH . 
Q 4 HOH X 7 2007 2007 HOH HOH . 
Q 4 HOH X 8 2008 2008 HOH HOH . 
Q 4 HOH X 9 2009 2009 HOH HOH . 
Q 4 HOH X 10 2010 2010 HOH HOH . 
Q 4 HOH X 11 2011 2011 HOH HOH . 
Q 4 HOH X 12 2012 2012 HOH HOH . 
Q 4 HOH X 13 2013 2013 HOH HOH . 
Q 4 HOH X 14 2014 2014 HOH HOH . 
Q 4 HOH X 15 2015 2015 HOH HOH . 
Q 4 HOH X 16 2016 2016 HOH HOH . 
Q 4 HOH X 17 2017 2017 HOH HOH . 
Q 4 HOH X 18 2018 2018 HOH HOH . 
Q 4 HOH X 19 2019 2019 HOH HOH . 
Q 4 HOH X 20 2020 2020 HOH HOH . 
Q 4 HOH X 21 2021 2021 HOH HOH . 
Q 4 HOH X 22 2022 2022 HOH HOH . 
Q 4 HOH X 23 2023 2023 HOH HOH . 
Q 4 HOH X 24 2024 2024 HOH HOH . 
Q 4 HOH X 25 2025 2025 HOH HOH . 
Q 4 HOH X 26 2026 2026 HOH HOH . 
Q 4 HOH X 27 2027 2027 HOH HOH . 
Q 4 HOH X 28 2028 2028 HOH HOH . 
Q 4 HOH X 29 2029 2029 HOH HOH . 
Q 4 HOH X 30 2030 2030 HOH HOH . 
Q 4 HOH X 31 2031 2031 HOH HOH . 
Q 4 HOH X 32 2032 2032 HOH HOH . 
Q 4 HOH X 33 2033 2033 HOH HOH . 
Q 4 HOH X 34 2034 2034 HOH HOH . 
Q 4 HOH X 35 2035 2035 HOH HOH . 
Q 4 HOH X 36 2036 2036 HOH HOH . 
Q 4 HOH X 37 2037 2037 HOH HOH . 
Q 4 HOH X 38 2038 2038 HOH HOH . 
Q 4 HOH X 39 2039 2039 HOH HOH . 
Q 4 HOH X 40 2040 2040 HOH HOH . 
Q 4 HOH X 41 2041 2041 HOH HOH . 
Q 4 HOH X 42 2042 2042 HOH HOH . 
Q 4 HOH X 43 2043 2043 HOH HOH . 
Q 4 HOH X 44 2044 2044 HOH HOH . 
Q 4 HOH X 45 2045 2045 HOH HOH . 
Q 4 HOH X 46 2046 2046 HOH HOH . 
Q 4 HOH X 47 2047 2047 HOH HOH . 
Q 4 HOH X 48 2048 2048 HOH HOH . 
Q 4 HOH X 49 2049 2049 HOH HOH . 
Q 4 HOH X 50 2050 2050 HOH HOH . 
Q 4 HOH X 51 2051 2051 HOH HOH . 
Q 4 HOH X 52 2052 2052 HOH HOH . 
Q 4 HOH X 53 2053 2053 HOH HOH . 
Q 4 HOH X 54 2054 2054 HOH HOH . 
Q 4 HOH X 55 2055 2055 HOH HOH . 
Q 4 HOH X 56 2056 2056 HOH HOH . 
Q 4 HOH X 57 2057 2057 HOH HOH . 
Q 4 HOH X 58 2058 2058 HOH HOH . 
Q 4 HOH X 59 2059 2059 HOH HOH . 
Q 4 HOH X 60 2060 2060 HOH HOH . 
Q 4 HOH X 61 2061 2061 HOH HOH . 
Q 4 HOH X 62 2062 2062 HOH HOH . 
Q 4 HOH X 63 2063 2063 HOH HOH . 
Q 4 HOH X 64 2064 2064 HOH HOH . 
Q 4 HOH X 65 2065 2065 HOH HOH . 
Q 4 HOH X 66 2066 2066 HOH HOH . 
Q 4 HOH X 67 2067 2067 HOH HOH . 
Q 4 HOH X 68 2068 2068 HOH HOH . 
Q 4 HOH X 69 2069 2069 HOH HOH . 
Q 4 HOH X 70 2070 2070 HOH HOH . 
Q 4 HOH X 71 2071 2071 HOH HOH . 
Q 4 HOH X 72 2072 2072 HOH HOH . 
Q 4 HOH X 73 2073 2073 HOH HOH . 
Q 4 HOH X 74 2074 2074 HOH HOH . 
Q 4 HOH X 75 2075 2075 HOH HOH . 
Q 4 HOH X 76 2076 2076 HOH HOH . 
Q 4 HOH X 77 2077 2077 HOH HOH . 
Q 4 HOH X 78 2078 2078 HOH HOH . 
Q 4 HOH X 79 2079 2079 HOH HOH . 
Q 4 HOH X 80 2080 2080 HOH HOH . 
Q 4 HOH X 81 2081 2081 HOH HOH . 
Q 4 HOH X 82 2082 2082 HOH HOH . 
Q 4 HOH X 83 2083 2083 HOH HOH . 
Q 4 HOH X 84 2084 2084 HOH HOH . 
Q 4 HOH X 85 2085 2085 HOH HOH . 
Q 4 HOH X 86 2086 2086 HOH HOH . 
Q 4 HOH X 87 2087 2087 HOH HOH . 
Q 4 HOH X 88 2088 2088 HOH HOH . 
Q 4 HOH X 89 2089 2089 HOH HOH . 
Q 4 HOH X 90 2090 2090 HOH HOH . 
Q 4 HOH X 91 2091 2091 HOH HOH . 
Q 4 HOH X 92 2092 2092 HOH HOH . 
Q 4 HOH X 93 2093 2093 HOH HOH . 
Q 4 HOH X 94 2094 2094 HOH HOH . 
Q 4 HOH X 95 2095 2095 HOH HOH . 
Q 4 HOH X 96 2096 2096 HOH HOH . 
Q 4 HOH X 97 2097 2097 HOH HOH . 
Q 4 HOH X 98 2098 2098 HOH HOH . 
Q 4 HOH X 99 2099 2099 HOH HOH . 
Q 4 HOH X 100 2100 2100 HOH HOH . 
Q 4 HOH X 101 2101 2101 HOH HOH . 
Q 4 HOH X 102 2102 2102 HOH HOH . 
Q 4 HOH X 103 2103 2103 HOH HOH . 
Q 4 HOH X 104 2104 2104 HOH HOH . 
Q 4 HOH X 105 2105 2105 HOH HOH . 
Q 4 HOH X 106 2106 2106 HOH HOH . 
Q 4 HOH X 107 2107 2107 HOH HOH . 
Q 4 HOH X 108 2108 2108 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           NI 
_atom_site.label_atom_id         NI 
_atom_site.label_comp_id         NI 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         D 
_atom_site.label_entity_id       2 
_atom_site.Cartn_x               2.367 
_atom_site.Cartn_y               22.252 
_atom_site.Cartn_z               61.832 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        31.63 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          NI 
_atom_site.auth_comp_id          NI 
_atom_site.auth_seq_id           1215 
_atom_site.auth_asym_id          X 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           29 
_model_server_stats.create_model_time_ms    9 
_model_server_stats.query_time_ms           433 
_model_server_stats.encode_time_ms          7 
_model_server_stats.element_count           1 
#