data_2X38 # _model_server_result.job_id sUJ_tp2BdMeaeiyrTYutPw _model_server_result.datetime_utc '2025-02-05 17:04:39' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2x38 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":2028}' # _entry.id 2X38 # _exptl.entry_id 2X38 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 397.433 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-[(6-AMINO-9H-PURIN-9-YL)METHYL]-5-METHYL-3-(2-METHYLPHENYL)QUINAZOLIN-4(3H)-ONE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 103.39 _cell.angle_gamma 90 _cell.entry_id 2X38 _cell.length_a 142.42 _cell.length_b 64.66 _cell.length_c 116.9 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2X38 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C22 H19 N7 O' _chem_comp.formula_weight 397.433 _chem_comp.id IC8 _chem_comp.mon_nstd_flag . _chem_comp.name 2-[(6-AMINO-9H-PURIN-9-YL)METHYL]-5-METHYL-3-(2-METHYLPHENYL)QUINAZOLIN-4(3H)-ONE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CAT CAP IC8 sing 152 n n CAP CAQ IC8 sing 153 n y CAP CAH IC8 doub 154 n y CAQ CAR IC8 doub 155 n y CAR CAJ IC8 sing 156 n y CAJ CAI IC8 doub 157 n y CAI CAH IC8 sing 158 n y CAH NAG IC8 sing 159 n n NAG CAF IC8 sing 160 n n NAG CAO IC8 sing 161 n n CAF OAB IC8 doub 162 n n CAF CAE IC8 sing 163 n n CAE CAD IC8 sing 164 n y CAE CAM IC8 doub 165 n y CAD CAA IC8 sing 166 n n CAD CAC IC8 doub 167 n y CAC CAK IC8 sing 168 n y CAK CAL IC8 doub 169 n y CAL CAM IC8 sing 170 n y CAM NAN IC8 sing 171 n n NAN CAO IC8 doub 172 n n CAO CAS IC8 sing 173 n n CAS N9 IC8 sing 174 n n N9 C8 IC8 sing 175 n y N9 C4 IC8 sing 176 n y C8 N7 IC8 doub 177 n y N7 C5 IC8 sing 178 n y C5 C4 IC8 sing 179 n y C5 C6 IC8 doub 180 n y C4 N3 IC8 doub 181 n y N3 C2 IC8 sing 182 n y C2 N1 IC8 doub 183 n y N1 C6 IC8 sing 184 n y C6 N6 IC8 sing 185 n n CAT HAT1 IC8 sing 186 n n CAT HAT2 IC8 sing 187 n n CAT HAT3 IC8 sing 188 n n CAQ HAQ IC8 sing 189 n n CAR HAR IC8 sing 190 n n CAJ HAJ IC8 sing 191 n n CAI HAI IC8 sing 192 n n CAA HAA1 IC8 sing 193 n n CAA HAA2 IC8 sing 194 n n CAA HAA3 IC8 sing 195 n n CAC HAC IC8 sing 196 n n CAK HAK IC8 sing 197 n n CAL HAL IC8 sing 198 n n CAS HAS1 IC8 sing 199 n n CAS HAS2 IC8 sing 200 n n C8 H8 IC8 sing 201 n n C2 H2 IC8 sing 202 n n N6 H61N IC8 sing 203 n n N6 H62N IC8 sing 204 n n # _atom_sites.entry_id 2X38 _atom_sites.fract_transf_matrix[1][1] 0.007021 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001671 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015466 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008793 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 IC8 A 1 2028 2028 IC8 IC8 . C 3 HOH A 1 2001 2001 HOH HOH . C 3 HOH A 2 2002 2002 HOH HOH . C 3 HOH A 3 2003 2003 HOH HOH . C 3 HOH A 4 2004 2004 HOH HOH . C 3 HOH A 5 2005 2005 HOH HOH . C 3 HOH A 6 2006 2006 HOH HOH . C 3 HOH A 7 2007 2007 HOH HOH . C 3 HOH A 8 2008 2008 HOH HOH . C 3 HOH A 9 2009 2009 HOH HOH . C 3 HOH A 10 2010 2010 HOH HOH . C 3 HOH A 11 2011 2011 HOH HOH . C 3 HOH A 12 2012 2012 HOH HOH . C 3 HOH A 13 2013 2013 HOH HOH . C 3 HOH A 14 2014 2014 HOH HOH . C 3 HOH A 15 2015 2015 HOH HOH . C 3 HOH A 16 2016 2016 HOH HOH . C 3 HOH A 17 2017 2017 HOH HOH . C 3 HOH A 18 2018 2018 HOH HOH . C 3 HOH A 19 2019 2019 HOH HOH . C 3 HOH A 20 2020 2020 HOH HOH . C 3 HOH A 21 2021 2021 HOH HOH . C 3 HOH A 22 2022 2022 HOH HOH . C 3 HOH A 23 2023 2023 HOH HOH . C 3 HOH A 24 2024 2024 HOH HOH . C 3 HOH A 25 2025 2025 HOH HOH . C 3 HOH A 26 2026 2026 HOH HOH . C 3 HOH A 27 2027 2027 HOH HOH . C 3 HOH A 28 2029 2029 HOH HOH . C 3 HOH A 29 2030 2030 HOH HOH . C 3 HOH A 30 2031 2031 HOH HOH . C 3 HOH A 31 2032 2032 HOH HOH . C 3 HOH A 32 2033 2033 HOH HOH . C 3 HOH A 33 2034 2034 HOH HOH . C 3 HOH A 34 2035 2035 HOH HOH . C 3 HOH A 35 2036 2036 HOH HOH . C 3 HOH A 36 2037 2037 HOH HOH . C 3 HOH A 37 2038 2038 HOH HOH . C 3 HOH A 38 2039 2039 HOH HOH . C 3 HOH A 39 2040 2040 HOH HOH . C 3 HOH A 40 2041 2041 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CAT IC8 . . . B 2 -3.001 -1.786 23.878 1 27.56 ? CAT IC8 2028 A 1 HETATM 2 C CAP IC8 . . . B 2 -3.872 -3.051 23.768 1 32.05 ? CAP IC8 2028 A 1 HETATM 3 C CAQ IC8 . . . B 2 -3.514 -4.175 24.514 1 30.94 ? CAQ IC8 2028 A 1 HETATM 4 C CAR IC8 . . . B 2 -4.296 -5.333 24.449 1 32.79 ? CAR IC8 2028 A 1 HETATM 5 C CAJ IC8 . . . B 2 -5.43 -5.381 23.632 1 34.81 ? CAJ IC8 2028 A 1 HETATM 6 C CAI IC8 . . . B 2 -5.789 -4.266 22.882 1 32.53 ? CAI IC8 2028 A 1 HETATM 7 C CAH IC8 . . . B 2 -5.015 -3.1 22.963 1 30.74 ? CAH IC8 2028 A 1 HETATM 8 N NAG IC8 . . . B 2 -5.442 -2.021 22.171 1 30.57 ? NAG IC8 2028 A 1 HETATM 9 C CAF IC8 . . . B 2 -4.908 -1.85 20.865 1 29.43 ? CAF IC8 2028 A 1 HETATM 10 O OAB IC8 . . . B 2 -4.048 -2.612 20.464 1 30.37 ? OAB IC8 2028 A 1 HETATM 11 C CAE IC8 . . . B 2 -5.328 -0.808 20.048 1 28.43 ? CAE IC8 2028 A 1 HETATM 12 C CAD IC8 . . . B 2 -4.811 -0.585 18.749 1 27.69 ? CAD IC8 2028 A 1 HETATM 13 C CAA IC8 . . . B 2 -3.719 -1.461 18.098 1 28.13 ? CAA IC8 2028 A 1 HETATM 14 C CAC IC8 . . . B 2 -5.297 0.485 18 1 26.15 ? CAC IC8 2028 A 1 HETATM 15 C CAK IC8 . . . B 2 -6.283 1.31 18.513 1 25.42 ? CAK IC8 2028 A 1 HETATM 16 C CAL IC8 . . . B 2 -6.801 1.09 19.792 1 24.51 ? CAL IC8 2028 A 1 HETATM 17 C CAM IC8 . . . B 2 -6.318 0.03 20.569 1 27.29 ? CAM IC8 2028 A 1 HETATM 18 N NAN IC8 . . . B 2 -6.821 -0.171 21.802 1 25.84 ? NAN IC8 2028 A 1 HETATM 19 C CAO IC8 . . . B 2 -6.441 -1.16 22.609 1 28.6 ? CAO IC8 2028 A 1 HETATM 20 C CAS IC8 . . . B 2 -7.083 -1.308 24.019 1 28.7 ? CAS IC8 2028 A 1 HETATM 21 N N9 IC8 . . . B 2 -7.453 0.043 24.488 1 27.13 ? N9 IC8 2028 A 1 HETATM 22 C C8 IC8 . . . B 2 -8.675 0.605 24.388 1 24.56 ? C8 IC8 2028 A 1 HETATM 23 N N7 IC8 . . . B 2 -8.594 1.848 24.891 1 23.09 ? N7 IC8 2028 A 1 HETATM 24 C C5 IC8 . . . B 2 -7.334 2.03 25.31 1 23.16 ? C5 IC8 2028 A 1 HETATM 25 C C4 IC8 . . . B 2 -6.604 0.881 25.044 1 23.6 ? C4 IC8 2028 A 1 HETATM 26 N N3 IC8 . . . B 2 -5.309 0.803 25.362 1 23.93 ? N3 IC8 2028 A 1 HETATM 27 C C2 IC8 . . . B 2 -4.694 1.832 25.933 1 24.46 ? C2 IC8 2028 A 1 HETATM 28 N N1 IC8 . . . B 2 -5.371 2.954 26.209 1 27.31 ? N1 IC8 2028 A 1 HETATM 29 C C6 IC8 . . . B 2 -6.683 3.082 25.912 1 23.51 ? C6 IC8 2028 A 1 HETATM 30 N N6 IC8 . . . B 2 -7.359 4.206 26.189 1 24.89 ? N6 IC8 2028 A 1 # _model_server_stats.io_time_ms 64 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 307 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 30 #