data_2X5U # _model_server_result.job_id 1euGPDEuxwM5kG86RmEQ4g _model_server_result.datetime_utc '2024-10-19 11:43:10' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2x5u # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"O","auth_seq_id":1327}' # _entry.id 2X5U # _exptl.entry_id 2X5U _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 55.845 _entity.id 8 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FE (II) ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2X5U _cell.length_a 85.693 _cell.length_b 143.47 _cell.length_c 177.998 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2X5U _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 8 _struct_asym.id O _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A SG CYS 87 C CYS 87 1_555 E CAB HEC . C HEC 1333 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.794 ? covale ? covale2 A SG CYS 90 C CYS 90 1_555 E CAC HEC . C HEC 1333 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.801 ? covale ? covale3 A SG CYS 132 C CYS 132 1_555 F CAB HEC . C HEC 1334 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.794 ? covale ? covale4 A SG CYS 135 C CYS 135 1_555 F CAC HEC . C HEC 1334 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.808 ? covale ? covale5 A SG CYS 244 C CYS 244 1_555 G CAB HEC . C HEC 1335 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.791 ? covale ? covale6 A SG CYS 247 C CYS 247 1_555 G CAC HEC . C HEC 1335 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.805 ? covale ? covale7 A SG CYS 305 C CYS 305 1_555 H CAB HEC . C HEC 1336 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.794 ? covale ? covale8 A SG CYS 308 C CYS 308 1_555 H CAC HEC . C HEC 1336 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.801 ? covale ? covale9 B C FME 1 H FME 1 1_555 B N TYR 2 H TYR 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? metalc ? metalc1 A SD MET 74 C MET 74 1_555 E FE HEC . C HEC 1333 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.361 ? metalc ? metalc2 A NE2 HIS 91 C HIS 91 1_555 E FE HEC . C HEC 1333 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.976 ? metalc ? metalc3 A SD MET 110 C MET 110 1_555 F FE HEC . C HEC 1334 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.332 ? metalc ? metalc4 A NE2 HIS 124 C HIS 124 1_555 H FE HEC . C HEC 1336 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.059 ? metalc ? metalc5 A NE2 HIS 136 C HIS 136 1_555 F FE HEC . C HEC 1334 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.114 ? metalc ? metalc6 A SD MET 233 C MET 233 1_555 G FE HEC . C HEC 1335 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.394 ? metalc ? metalc7 A NE2 HIS 248 C HIS 248 1_555 G FE HEC . C HEC 1335 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.95 ? metalc ? metalc8 A NE2 HIS 309 C HIS 309 1_555 H FE HEC . C HEC 1336 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? metalc ? metalc9 C NE2 HIS 191 L HIS 190 1_555 O FE FE2 . M FE2 1327 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.983 ? metalc ? metalc10 C NE2 HIS 231 L HIS 230 1_555 O FE FE2 . M FE2 1327 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.207 ? metalc ? metalc11 D NE2 HIS 218 M HIS 217 1_555 O FE FE2 . M FE2 1327 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.224 ? metalc ? metalc12 D OE1 GLU 233 M GLU 232 1_555 O FE FE2 . M FE2 1327 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.307 ? metalc ? metalc13 D OE2 GLU 233 M GLU 232 1_555 O FE FE2 . M FE2 1327 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.085 ? metalc ? metalc14 D NE2 HIS 265 M HIS 264 1_555 O FE FE2 . M FE2 1327 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.113 ? # _chem_comp.formula 'Fe 2' _chem_comp.formula_weight 55.845 _chem_comp.id FE2 _chem_comp.mon_nstd_flag . _chem_comp.name 'FE (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 2X5U _atom_sites.fract_transf_matrix[1][1] 0.01167 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00697 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005618 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 5 HEC C 1 1333 1333 HEC HEM . F 5 HEC C 1 1334 1334 HEC HEM . G 5 HEC C 1 1335 1335 HEC HEM . H 5 HEC C 1 1336 1336 HEC HEM . I 6 BCB L 1 1274 1274 BCB BCB . J 6 BCB L 1 1275 1275 BCB BCB . K 7 BPB L 1 1276 1276 BPB BPB . L 6 BCB M 1 1324 1324 BCB BCB . M 6 BCB M 1 1325 1325 BCB BCB . N 7 BPB M 1 1326 1326 BPB BPB . O 8 FE2 M 1 1327 1327 FE2 FE2 . P 9 MQ7 M 1 1328 1328 MQ7 MQ7 . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol FE _atom_site.label_atom_id FE _atom_site.label_comp_id FE2 _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id O _atom_site.label_entity_id 8 _atom_site.Cartn_x 26.538 _atom_site.Cartn_y 36.388 _atom_site.Cartn_z 18.86 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 15.79 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id FE _atom_site.auth_comp_id FE2 _atom_site.auth_seq_id 1327 _atom_site.auth_asym_id M _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 335 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #