data_2X6A # _model_server_result.job_id psQEAYC1JrVzEC00CNRxSg _model_server_result.datetime_utc '2025-02-26 16:14:26' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2x6a # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1298}' # _entry.id 2X6A # _exptl.entry_id 2X6A _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 184.151 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description PHOSPHOCHOLINE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2X6A _cell.length_a 107.759 _cell.length_b 107.759 _cell.length_c 89.242 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2X6A _symmetry.cell_setting ? _symmetry.Int_Tables_number 90 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 4 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 3_545 -y+1/2,x-1/2,z 0 -1 0 1 0 0 0 0 1 53.8795 -53.8795 0 3 'crystal symmetry operation' 2_655 -x+1,-y,z -1 0 0 0 -1 0 0 0 1 107.759 0 0 4 'crystal symmetry operation' 4_555 y+1/2,-x+1/2,z 0 1 0 -1 0 0 0 0 1 53.8795 53.8795 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O THR 96 A THR 96 1_555 D K K . A K 1300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.632 ? metalc ? metalc2 A O THR 96 A THR 96 2_655 D K K . A K 1300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.631 ? metalc ? metalc3 A O THR 96 A THR 96 3_545 D K K . A K 1300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.632 ? metalc ? metalc4 A O THR 96 A THR 96 4_555 D K K . A K 1300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.631 ? metalc ? metalc5 A OG1 THR 96 A THR 96 1_555 E K K . A K 1301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.662 ? metalc ? metalc6 A O THR 96 A THR 96 2_655 E K K . A K 1301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.756 ? metalc ? metalc7 A O THR 96 A THR 96 3_545 E K K . A K 1301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.757 ? metalc ? metalc8 A O THR 96 A THR 96 4_555 E K K . A K 1301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.756 ? metalc ? metalc9 A OG1 THR 96 A THR 96 2_655 E K K . A K 1301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.661 ? metalc ? metalc10 A OG1 THR 96 A THR 96 3_545 E K K . A K 1301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.661 ? metalc ? metalc11 A OG1 THR 96 A THR 96 4_555 E K K . A K 1301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.661 ? metalc ? metalc12 A O THR 96 A THR 96 1_555 E K K . A K 1301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.757 ? metalc ? metalc13 A O ILE 97 A ILE 97 3_545 D K K . A K 1300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.672 ? metalc ? metalc14 A O ILE 97 A ILE 97 1_555 D K K . A K 1300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.672 ? metalc ? metalc15 A O ILE 97 A ILE 97 2_655 D K K . A K 1300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.671 ? metalc ? metalc16 A O ILE 97 A ILE 97 4_555 D K K . A K 1300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.671 ? metalc ? metalc17 A O GLY 98 A GLY 98 1_555 C K K . A K 1299 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.831 ? metalc ? metalc18 A O GLY 98 A GLY 98 2_655 C K K . A K 1299 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.83 ? metalc ? metalc19 A O GLY 98 A GLY 98 3_545 C K K . A K 1299 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.83 ? metalc ? metalc20 A O GLY 98 A GLY 98 4_555 C K K . A K 1299 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.83 ? metalc ? metalc21 A O TYR 99 A TYR 99 3_545 C K K . A K 1299 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.64 ? metalc ? metalc22 A O TYR 99 A TYR 99 1_555 C K K . A K 1299 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.64 ? metalc ? metalc23 A O TYR 99 A TYR 99 2_655 C K K . A K 1299 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.64 ? metalc ? metalc24 A O TYR 99 A TYR 99 4_555 C K K . A K 1299 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.639 ? # _chem_comp.formula 'C5 H15 N O4 P 1' _chem_comp.formula_weight 184.151 _chem_comp.id PC _chem_comp.mon_nstd_flag . _chem_comp.name PHOSPHOCHOLINE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P1 O1 PC doub 237 n n P1 O3 PC sing 238 n n P1 O4 PC sing 239 n n P1 O2 PC sing 240 n n O3 HO3 PC sing 241 n n O4 HO4 PC sing 242 n n O2 C1 PC sing 243 n n C1 C2 PC sing 244 n n C1 H11 PC sing 245 n n C1 H12 PC sing 246 n n C2 N1 PC sing 247 n n C2 H21 PC sing 248 n n C2 H22 PC sing 249 n n N1 C3 PC sing 250 n n N1 C4 PC sing 251 n n N1 C5 PC sing 252 n n C3 H31 PC sing 253 n n C3 H32 PC sing 254 n n C3 H33 PC sing 255 n n C4 H41 PC sing 256 n n C4 H42 PC sing 257 n n C4 H43 PC sing 258 n n C5 H51 PC sing 259 n n C5 H52 PC sing 260 n n C5 H53 PC sing 261 n n # _atom_sites.entry_id 2X6A _atom_sites.fract_transf_matrix[1][1] 0.00928 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00928 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011205 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PC A 1 1298 1298 PC PC . C 3 K A 1 1299 1299 K K . D 3 K A 1 1300 1300 K K . E 3 K A 1 1301 1301 K K . F 4 HOH A 1 2001 2001 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P1 PC . . . B 2 73.352 9.583 -83.105 1 97.2 ? P1 PC 1298 A 1 HETATM 2 O O1 PC . . . B 2 72.55 10.214 -81.908 1 21.35 ? O1 PC 1298 A 1 HETATM 3 O O3 PC . . . B 2 74.377 10.684 -83.529 1 76.76 ? O3 PC 1298 A 1 HETATM 4 O O4 PC . . . B 2 74.029 8.285 -82.713 1 79.68 ? O4 PC 1298 A 1 HETATM 5 O O2 PC . . . B 2 72.326 9.307 -84.278 1 37.28 ? O2 PC 1298 A 1 HETATM 6 C C1 PC . . . B 2 71.21 10.163 -84.252 1 48.55 ? C1 PC 1298 A 1 HETATM 7 C C2 PC . . . B 2 70.229 10.193 -85.427 1 51.27 ? C2 PC 1298 A 1 HETATM 8 N N1 PC . . . B 2 70.78 10.459 -86.766 1 63.41 ? N1 PC 1298 A 1 HETATM 9 C C3 PC . . . B 2 69.867 9.67 -87.6 1 71.85 ? C3 PC 1298 A 1 HETATM 10 C C4 PC . . . B 2 72.071 10.038 -87.25 1 65.01 ? C4 PC 1298 A 1 HETATM 11 C C5 PC . . . B 2 70.679 11.893 -87.019 1 71.62 ? C5 PC 1298 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 210 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 11 #