data_2X6B # _model_server_result.job_id QM1BJQSpUIaPnk5IOZVUtQ _model_server_result.datetime_utc '2024-10-18 20:24:11' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2x6b # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1301}' # _entry.id 2X6B # _exptl.entry_id 2X6B _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 137.327 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'BARIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2X6B _cell.length_a 104.798 _cell.length_b 104.798 _cell.length_c 88.417 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2X6B _symmetry.cell_setting ? _symmetry.Int_Tables_number 90 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 4 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 3_555 -y+1/2,x+1/2,z 0 -1 0 1 0 0 0 0 1 52.399 52.399 0 3 'crystal symmetry operation' 2_565 -x,-y+1,z -1 0 0 0 -1 0 0 0 1 0 104.798 0 4 'crystal symmetry operation' 4_455 y-1/2,-x+1/2,z 0 1 0 -1 0 0 0 0 1 -52.399 52.399 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OG1 THR 96 A THR 96 1_555 B BA BA . A BA 1301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.688 ? metalc ? metalc2 A OG1 THR 96 A THR 96 3_555 B BA BA . A BA 1301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.688 ? metalc ? metalc3 A OG1 THR 96 A THR 96 2_565 B BA BA . A BA 1301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.688 ? metalc ? metalc4 A OG1 THR 96 A THR 96 4_455 B BA BA . A BA 1301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.688 ? metalc ? metalc5 A O ILE 97 A ILE 97 2_565 C K K . A K 1302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.445 ? metalc ? metalc6 A O ILE 97 A ILE 97 3_555 C K K . A K 1302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.445 ? metalc ? metalc7 A O ILE 97 A ILE 97 1_555 C K K . A K 1302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.445 ? metalc ? metalc8 A O ILE 97 A ILE 97 4_455 C K K . A K 1302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.445 ? metalc ? metalc9 A O GLY 98 A GLY 98 2_565 C K K . A K 1302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.008 ? metalc ? metalc10 A O GLY 98 A GLY 98 3_555 C K K . A K 1302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.008 ? metalc ? metalc11 A O GLY 98 A GLY 98 4_455 C K K . A K 1302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.008 ? metalc ? metalc12 A O GLY 98 A GLY 98 1_555 C K K . A K 1302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.008 ? metalc ? metalc13 A O GLY 98 A GLY 98 3_555 D K K . A K 1303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.688 ? metalc ? metalc14 A O GLY 98 A GLY 98 2_565 D K K . A K 1303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.688 ? metalc ? metalc15 A O GLY 98 A GLY 98 4_455 D K K . A K 1303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.688 ? metalc ? metalc16 A O GLY 98 A GLY 98 1_555 D K K . A K 1303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.688 ? metalc ? metalc17 A O TYR 99 A TYR 99 2_565 D K K . A K 1303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.463 ? metalc ? metalc18 A O TYR 99 A TYR 99 3_555 D K K . A K 1303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.463 ? metalc ? metalc19 A O TYR 99 A TYR 99 4_455 D K K . A K 1303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.463 ? metalc ? metalc20 A O TYR 99 A TYR 99 1_555 D K K . A K 1303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.463 ? # _chem_comp.formula 'Ba 2' _chem_comp.formula_weight 137.327 _chem_comp.id BA _chem_comp.mon_nstd_flag . _chem_comp.name 'BARIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 2X6B _atom_sites.fract_transf_matrix[1][1] 0.009542 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009542 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01131 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 BA A 1 1301 1301 BA BA . C 3 K A 1 1302 1302 K K . D 3 K A 1 1303 1303 K K . E 4 PC A 1 1304 1304 PC PC . F 3 K A 1 1305 1305 K K . G 5 HOH A 1 2001 2001 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol BA _atom_site.label_atom_id BA _atom_site.label_comp_id BA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x 0 _atom_site.Cartn_y 52.399 _atom_site.Cartn_z 52.662 _atom_site.occupancy 0.5 _atom_site.B_iso_or_equiv 116.87 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id BA _atom_site.auth_comp_id BA _atom_site.auth_seq_id 1301 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 265 _model_server_stats.encode_time_ms 11 _model_server_stats.element_count 1 #