data_2X6E # _model_server_result.job_id RzGJnP63BjEzQw4LvAEK6A _model_server_result.datetime_utc '2024-10-10 03:21:21' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2x6e # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1389}' # _entry.id 2X6E # _exptl.entry_id 2X6E _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 551.481 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 6-BROMO-7-{4-[(5-METHYLISOXAZOL-3-YL)METHYL]PIPERAZIN-1-YL}-2-[4-(4-METHYLPIPERAZIN-1-YL)PHENYL]-1H-IMIDAZO[4,5-B]PYRIDINE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 2X6E _cell.length_a 83.25 _cell.length_b 83.25 _cell.length_c 163.31 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2X6E _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 61 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C26 H31 Br N8 O' _chem_comp.formula_weight 551.481 _chem_comp.id YM4 _chem_comp.mon_nstd_flag . _chem_comp.name 6-BROMO-7-{4-[(5-METHYLISOXAZOL-3-YL)METHYL]PIPERAZIN-1-YL}-2-[4-(4-METHYLPIPERAZIN-1-YL)PHENYL]-1H-IMIDAZO[4,5-B]PYRIDINE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C01 C02 YM4 sing 374 n n C02 C03 YM4 doub 375 n y C02 O36 YM4 sing 376 n y C03 C04 YM4 sing 377 n y C04 C05 YM4 sing 378 n n C04 N35 YM4 doub 379 n y C05 N06 YM4 sing 380 n n N06 C07 YM4 sing 381 n n N06 C34 YM4 sing 382 n n C07 C08 YM4 sing 383 n n C08 N09 YM4 sing 384 n n N09 C10 YM4 sing 385 n n N09 C33 YM4 sing 386 n n C10 C11 YM4 sing 387 n y C10 C32 YM4 doub 388 n y C11 BR1 YM4 sing 389 n n C11 C13 YM4 doub 390 n y C13 N14 YM4 sing 391 n y N14 C15 YM4 doub 392 n y C15 N16 YM4 sing 393 n y C15 C32 YM4 sing 394 n y N16 C17 YM4 doub 395 n y C17 C18 YM4 sing 396 n y C17 N31 YM4 sing 397 n y C18 C19 YM4 sing 398 n y C18 C30 YM4 doub 399 n y C19 C20 YM4 doub 400 n y C20 C21 YM4 sing 401 n y C21 N22 YM4 sing 402 n n C21 C29 YM4 doub 403 n y N22 C23 YM4 sing 404 n n N22 C28 YM4 sing 405 n n C23 C24 YM4 sing 406 n n C24 N25 YM4 sing 407 n n N25 C26 YM4 sing 408 n n N25 C27 YM4 sing 409 n n C27 C28 YM4 sing 410 n n C29 C30 YM4 sing 411 n y N31 C32 YM4 sing 412 n y C33 C34 YM4 sing 413 n n N35 O36 YM4 sing 414 n y C01 H011 YM4 sing 415 n n C01 H012 YM4 sing 416 n n C01 H013 YM4 sing 417 n n C03 H03 YM4 sing 418 n n C05 H051 YM4 sing 419 n n C05 H052 YM4 sing 420 n n C07 H071 YM4 sing 421 n n C07 H072 YM4 sing 422 n n C34 H341 YM4 sing 423 n n C34 H342 YM4 sing 424 n n C08 H081 YM4 sing 425 n n C08 H082 YM4 sing 426 n n C33 H331 YM4 sing 427 n n C33 H332 YM4 sing 428 n n C13 H13 YM4 sing 429 n n N31 H31 YM4 sing 430 n n C19 H19 YM4 sing 431 n n C30 H30 YM4 sing 432 n n C20 H20 YM4 sing 433 n n C29 H29 YM4 sing 434 n n C23 H231 YM4 sing 435 n n C23 H232 YM4 sing 436 n n C28 H281 YM4 sing 437 n n C28 H282 YM4 sing 438 n n C24 H241 YM4 sing 439 n n C24 H242 YM4 sing 440 n n C26 H261 YM4 sing 441 n n C26 H262 YM4 sing 442 n n C26 H263 YM4 sing 443 n n C27 H271 YM4 sing 444 n n C27 H272 YM4 sing 445 n n # _atom_sites.entry_id 2X6E _atom_sites.fract_transf_matrix[1][1] 0.012012 _atom_sites.fract_transf_matrix[1][2] 0.006935 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01387 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006123 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # _pdbx_nonpoly_scheme.asym_id B _pdbx_nonpoly_scheme.entity_id 2 _pdbx_nonpoly_scheme.mon_id YM4 _pdbx_nonpoly_scheme.pdb_strand_id A _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 1389 _pdbx_nonpoly_scheme.auth_seq_num 1389 _pdbx_nonpoly_scheme.pdb_mon_id YM4 _pdbx_nonpoly_scheme.auth_mon_id YM4 _pdbx_nonpoly_scheme.pdb_ins_code . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C01 YM4 . . . B 2 -6.637 22.478 -4.451 1 121.81 ? C01 YM4 1389 A 1 HETATM 2 C C02 YM4 . . . B 2 -6.423 23.911 -3.924 1 113.57 ? C02 YM4 1389 A 1 HETATM 3 C C03 YM4 . . . B 2 -7.211 25.034 -4.203 1 106.84 ? C03 YM4 1389 A 1 HETATM 4 C C04 YM4 . . . B 2 -6.633 26.157 -3.49 1 106.86 ? C04 YM4 1389 A 1 HETATM 5 C C05 YM4 . . . B 2 -7.109 27.61 -3.511 1 98.14 ? C05 YM4 1389 A 1 HETATM 6 N N06 YM4 . . . B 2 -6.156 28.361 -4.338 1 92.17 ? N06 YM4 1389 A 1 HETATM 7 C C07 YM4 . . . B 2 -6.834 28.901 -5.548 1 99.39 ? C07 YM4 1389 A 1 HETATM 8 C C08 YM4 . . . B 2 -6.108 30.154 -6.042 1 106.53 ? C08 YM4 1389 A 1 HETATM 9 N N09 YM4 . . . B 2 -4.674 30.098 -5.851 1 103.38 ? N09 YM4 1389 A 1 HETATM 10 C C10 YM4 . . . B 2 -3.965 31.016 -6.764 1 95.26 ? C10 YM4 1389 A 1 HETATM 11 C C11 YM4 . . . B 2 -4.069 30.866 -8.124 1 99.77 ? C11 YM4 1389 A 1 HETATM 12 BR BR1 YM4 . . . B 2 -5.024 29.336 -8.851 1 155.4 ? BR1 YM4 1389 A 1 HETATM 13 C C13 YM4 . . . B 2 -3.459 31.784 -9.045 1 93.43 ? C13 YM4 1389 A 1 HETATM 14 N N14 YM4 . . . B 2 -2.74 32.888 -8.546 1 89.99 ? N14 YM4 1389 A 1 HETATM 15 C C15 YM4 . . . B 2 -2.637 33.06 -7.159 1 95.54 ? C15 YM4 1389 A 1 HETATM 16 N N16 YM4 . . . B 2 -1.988 34.06 -6.419 1 101.96 ? N16 YM4 1389 A 1 HETATM 17 C C17 YM4 . . . B 2 -2.219 33.776 -5.1 1 102.39 ? C17 YM4 1389 A 1 HETATM 18 C C18 YM4 . . . B 2 -1.686 34.506 -4.02 1 97.93 ? C18 YM4 1389 A 1 HETATM 19 C C19 YM4 . . . B 2 -2.095 34.11 -2.694 1 98.13 ? C19 YM4 1389 A 1 HETATM 20 C C20 YM4 . . . B 2 -1.538 34.839 -1.555 1 104.42 ? C20 YM4 1389 A 1 HETATM 21 C C21 YM4 . . . B 2 -0.615 35.896 -1.781 1 106.2 ? C21 YM4 1389 A 1 HETATM 22 N N22 YM4 . . . B 2 -0.117 36.609 -0.583 1 108.57 ? N22 YM4 1389 A 1 HETATM 23 C C23 YM4 . . . B 2 0.175 35.712 0.582 1 112.8 ? C23 YM4 1389 A 1 HETATM 24 C C24 YM4 . . . B 2 1.242 36.385 1.478 1 121.31 ? C24 YM4 1389 A 1 HETATM 25 N N25 YM4 . . . B 2 1.132 37.867 1.505 1 126.19 ? N25 YM4 1389 A 1 HETATM 26 C C26 YM4 . . . B 2 0.857 38.462 2.82 1 129.28 ? C26 YM4 1389 A 1 HETATM 27 C C27 YM4 . . . B 2 0.609 38.709 0.397 1 117.05 ? C27 YM4 1389 A 1 HETATM 28 C C28 YM4 . . . B 2 -0.432 38.033 -0.491 1 109.05 ? C28 YM4 1389 A 1 HETATM 29 C C29 YM4 . . . B 2 -0.193 36.289 -3.118 1 103.55 ? C29 YM4 1389 A 1 HETATM 30 C C30 YM4 . . . B 2 -0.745 35.56 -4.268 1 97.54 ? C30 YM4 1389 A 1 HETATM 31 N N31 YM4 . . . B 2 -2.973 32.572 -4.988 1 94.74 ? N31 YM4 1389 A 1 HETATM 32 C C32 YM4 . . . B 2 -3.234 32.164 -6.264 1 89.82 ? C32 YM4 1389 A 1 HETATM 33 C C33 YM4 . . . B 2 -4.041 29.614 -4.63 1 98.8 ? C33 YM4 1389 A 1 HETATM 34 C C34 YM4 . . . B 2 -5.109 29.141 -3.632 1 95.73 ? C34 YM4 1389 A 1 HETATM 35 N N35 YM4 . . . B 2 -5.518 25.712 -2.798 1 113.31 ? N35 YM4 1389 A 1 HETATM 36 O O36 YM4 . . . B 2 -5.372 24.309 -3.055 1 114.94 ? O36 YM4 1389 A 1 # _model_server_stats.io_time_ms 16 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 271 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 36 #