data_2X6E
#
_model_server_result.job_id            luqCcQPuhO0TQILSfwhxUA 
_model_server_result.datetime_utc      '2024-11-28 00:18:28' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2x6e 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":1389}' 
#
_entry.id    2X6E 
#
_exptl.entry_id    2X6E 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              551.481 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            6-BROMO-7-{4-[(5-METHYLISOXAZOL-3-YL)METHYL]PIPERAZIN-1-YL}-2-[4-(4-METHYLPIPERAZIN-1-YL)PHENYL]-1H-IMIDAZO[4,5-B]PYRIDINE 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            2X6E 
_cell.length_a            83.25 
_cell.length_b            83.25 
_cell.length_c            163.31 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 2X6E 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        178 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 61 2 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C26 H31 Br N8 O' 
_chem_comp.formula_weight    551.481 
_chem_comp.id                YM4 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              6-BROMO-7-{4-[(5-METHYLISOXAZOL-3-YL)METHYL]PIPERAZIN-1-YL}-2-[4-(4-METHYLPIPERAZIN-1-YL)PHENYL]-1H-IMIDAZO[4,5-B]PYRIDINE 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C01 C02 YM4 sing 374 n n 
C02 C03 YM4 doub 375 n y 
C02 O36 YM4 sing 376 n y 
C03 C04 YM4 sing 377 n y 
C04 C05 YM4 sing 378 n n 
C04 N35 YM4 doub 379 n y 
C05 N06 YM4 sing 380 n n 
N06 C07 YM4 sing 381 n n 
N06 C34 YM4 sing 382 n n 
C07 C08 YM4 sing 383 n n 
C08 N09 YM4 sing 384 n n 
N09 C10 YM4 sing 385 n n 
N09 C33 YM4 sing 386 n n 
C10 C11 YM4 sing 387 n y 
C10 C32 YM4 doub 388 n y 
C11 BR1 YM4 sing 389 n n 
C11 C13 YM4 doub 390 n y 
C13 N14 YM4 sing 391 n y 
N14 C15 YM4 doub 392 n y 
C15 N16 YM4 sing 393 n y 
C15 C32 YM4 sing 394 n y 
N16 C17 YM4 doub 395 n y 
C17 C18 YM4 sing 396 n y 
C17 N31 YM4 sing 397 n y 
C18 C19 YM4 sing 398 n y 
C18 C30 YM4 doub 399 n y 
C19 C20 YM4 doub 400 n y 
C20 C21 YM4 sing 401 n y 
C21 N22 YM4 sing 402 n n 
C21 C29 YM4 doub 403 n y 
N22 C23 YM4 sing 404 n n 
N22 C28 YM4 sing 405 n n 
C23 C24 YM4 sing 406 n n 
C24 N25 YM4 sing 407 n n 
N25 C26 YM4 sing 408 n n 
N25 C27 YM4 sing 409 n n 
C27 C28 YM4 sing 410 n n 
C29 C30 YM4 sing 411 n y 
N31 C32 YM4 sing 412 n y 
C33 C34 YM4 sing 413 n n 
N35 O36 YM4 sing 414 n y 
C01 H011 YM4 sing 415 n n 
C01 H012 YM4 sing 416 n n 
C01 H013 YM4 sing 417 n n 
C03 H03 YM4 sing 418 n n 
C05 H051 YM4 sing 419 n n 
C05 H052 YM4 sing 420 n n 
C07 H071 YM4 sing 421 n n 
C07 H072 YM4 sing 422 n n 
C34 H341 YM4 sing 423 n n 
C34 H342 YM4 sing 424 n n 
C08 H081 YM4 sing 425 n n 
C08 H082 YM4 sing 426 n n 
C33 H331 YM4 sing 427 n n 
C33 H332 YM4 sing 428 n n 
C13 H13 YM4 sing 429 n n 
N31 H31 YM4 sing 430 n n 
C19 H19 YM4 sing 431 n n 
C30 H30 YM4 sing 432 n n 
C20 H20 YM4 sing 433 n n 
C29 H29 YM4 sing 434 n n 
C23 H231 YM4 sing 435 n n 
C23 H232 YM4 sing 436 n n 
C28 H281 YM4 sing 437 n n 
C28 H282 YM4 sing 438 n n 
C24 H241 YM4 sing 439 n n 
C24 H242 YM4 sing 440 n n 
C26 H261 YM4 sing 441 n n 
C26 H262 YM4 sing 442 n n 
C26 H263 YM4 sing 443 n n 
C27 H271 YM4 sing 444 n n 
C27 H272 YM4 sing 445 n n 
#
_atom_sites.entry_id                     2X6E 
_atom_sites.fract_transf_matrix[1][1]    0.012012 
_atom_sites.fract_transf_matrix[1][2]    0.006935 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.01387 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.006123 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
_pdbx_nonpoly_scheme.asym_id          B 
_pdbx_nonpoly_scheme.entity_id        2 
_pdbx_nonpoly_scheme.mon_id           YM4 
_pdbx_nonpoly_scheme.pdb_strand_id    A 
_pdbx_nonpoly_scheme.ndb_seq_num      1 
_pdbx_nonpoly_scheme.pdb_seq_num      1389 
_pdbx_nonpoly_scheme.auth_seq_num     1389 
_pdbx_nonpoly_scheme.pdb_mon_id       YM4 
_pdbx_nonpoly_scheme.auth_mon_id      YM4 
_pdbx_nonpoly_scheme.pdb_ins_code     . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C01 YM4 . . . B 2 -6.637 22.478 -4.451 1 121.81 ? C01 YM4 1389 A 1 
HETATM 2 C C02 YM4 . . . B 2 -6.423 23.911 -3.924 1 113.57 ? C02 YM4 1389 A 1 
HETATM 3 C C03 YM4 . . . B 2 -7.211 25.034 -4.203 1 106.84 ? C03 YM4 1389 A 1 
HETATM 4 C C04 YM4 . . . B 2 -6.633 26.157 -3.49 1 106.86 ? C04 YM4 1389 A 1 
HETATM 5 C C05 YM4 . . . B 2 -7.109 27.61 -3.511 1 98.14 ? C05 YM4 1389 A 1 
HETATM 6 N N06 YM4 . . . B 2 -6.156 28.361 -4.338 1 92.17 ? N06 YM4 1389 A 1 
HETATM 7 C C07 YM4 . . . B 2 -6.834 28.901 -5.548 1 99.39 ? C07 YM4 1389 A 1 
HETATM 8 C C08 YM4 . . . B 2 -6.108 30.154 -6.042 1 106.53 ? C08 YM4 1389 A 1 
HETATM 9 N N09 YM4 . . . B 2 -4.674 30.098 -5.851 1 103.38 ? N09 YM4 1389 A 1 
HETATM 10 C C10 YM4 . . . B 2 -3.965 31.016 -6.764 1 95.26 ? C10 YM4 1389 A 1 
HETATM 11 C C11 YM4 . . . B 2 -4.069 30.866 -8.124 1 99.77 ? C11 YM4 1389 A 1 
HETATM 12 BR BR1 YM4 . . . B 2 -5.024 29.336 -8.851 1 155.4 ? BR1 YM4 1389 A 1 
HETATM 13 C C13 YM4 . . . B 2 -3.459 31.784 -9.045 1 93.43 ? C13 YM4 1389 A 1 
HETATM 14 N N14 YM4 . . . B 2 -2.74 32.888 -8.546 1 89.99 ? N14 YM4 1389 A 1 
HETATM 15 C C15 YM4 . . . B 2 -2.637 33.06 -7.159 1 95.54 ? C15 YM4 1389 A 1 
HETATM 16 N N16 YM4 . . . B 2 -1.988 34.06 -6.419 1 101.96 ? N16 YM4 1389 A 1 
HETATM 17 C C17 YM4 . . . B 2 -2.219 33.776 -5.1 1 102.39 ? C17 YM4 1389 A 1 
HETATM 18 C C18 YM4 . . . B 2 -1.686 34.506 -4.02 1 97.93 ? C18 YM4 1389 A 1 
HETATM 19 C C19 YM4 . . . B 2 -2.095 34.11 -2.694 1 98.13 ? C19 YM4 1389 A 1 
HETATM 20 C C20 YM4 . . . B 2 -1.538 34.839 -1.555 1 104.42 ? C20 YM4 1389 A 1 
HETATM 21 C C21 YM4 . . . B 2 -0.615 35.896 -1.781 1 106.2 ? C21 YM4 1389 A 1 
HETATM 22 N N22 YM4 . . . B 2 -0.117 36.609 -0.583 1 108.57 ? N22 YM4 1389 A 1 
HETATM 23 C C23 YM4 . . . B 2 0.175 35.712 0.582 1 112.8 ? C23 YM4 1389 A 1 
HETATM 24 C C24 YM4 . . . B 2 1.242 36.385 1.478 1 121.31 ? C24 YM4 1389 A 1 
HETATM 25 N N25 YM4 . . . B 2 1.132 37.867 1.505 1 126.19 ? N25 YM4 1389 A 1 
HETATM 26 C C26 YM4 . . . B 2 0.857 38.462 2.82 1 129.28 ? C26 YM4 1389 A 1 
HETATM 27 C C27 YM4 . . . B 2 0.609 38.709 0.397 1 117.05 ? C27 YM4 1389 A 1 
HETATM 28 C C28 YM4 . . . B 2 -0.432 38.033 -0.491 1 109.05 ? C28 YM4 1389 A 1 
HETATM 29 C C29 YM4 . . . B 2 -0.193 36.289 -3.118 1 103.55 ? C29 YM4 1389 A 1 
HETATM 30 C C30 YM4 . . . B 2 -0.745 35.56 -4.268 1 97.54 ? C30 YM4 1389 A 1 
HETATM 31 N N31 YM4 . . . B 2 -2.973 32.572 -4.988 1 94.74 ? N31 YM4 1389 A 1 
HETATM 32 C C32 YM4 . . . B 2 -3.234 32.164 -6.264 1 89.82 ? C32 YM4 1389 A 1 
HETATM 33 C C33 YM4 . . . B 2 -4.041 29.614 -4.63 1 98.8 ? C33 YM4 1389 A 1 
HETATM 34 C C34 YM4 . . . B 2 -5.109 29.141 -3.632 1 95.73 ? C34 YM4 1389 A 1 
HETATM 35 N N35 YM4 . . . B 2 -5.518 25.712 -2.798 1 113.31 ? N35 YM4 1389 A 1 
HETATM 36 O O36 YM4 . . . B 2 -5.372 24.309 -3.055 1 114.94 ? O36 YM4 1389 A 1 
#
_model_server_stats.io_time_ms              7 
_model_server_stats.parse_time_ms           6 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           307 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           36 
#