data_2X6O # _model_server_result.job_id XXLStBV4zA-ai4DtUJJwuw _model_server_result.datetime_utc '2024-11-06 19:26:31' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2x6o # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1209}' # _entry.id 2X6O # _exptl.entry_id 2X6O _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 460.864 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (4S,4AS,6S,8AS)-6-[(1S)-7-CHLORO-4-HYDROXY-1-METHYL-3-OXO-1,3-DIHYDRO-2-BENZOFURAN-1-YL]-4-(DIMETHYLAMINO)-3,8A-DIHYDROXY-1,8-DIOXO-1,4,4A,5,6,7,8,8A-OCTAHYDRONAPHTHALENE-2-CARBONITRILE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2X6O _cell.length_a 69.05 _cell.length_b 69.05 _cell.length_c 180.61 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2X6O _symmetry.cell_setting ? _symmetry.Int_Tables_number 98 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'I 41 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'crystal symmetry operation' 4_464 y-1/2,-x+1,z-1/4 0 1 0 -1 0 0 0 0 1 -34.525 69.05 -45.1525 2 'crystal symmetry operation' 11_554 -y+1/2,x,z-1/4 0 -1 0 1 0 0 0 0 1 34.525 0 -45.1525 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C22 H21 Cl N2 O7' _chem_comp.formula_weight 460.864 _chem_comp.id 2TC _chem_comp.mon_nstd_flag . _chem_comp.name (4S,4AS,6S,8AS)-6-[(1S)-7-CHLORO-4-HYDROXY-1-METHYL-3-OXO-1,3-DIHYDRO-2-BENZOFURAN-1-YL]-4-(DIMETHYLAMINO)-3,8A-DIHYDROXY-1,8-DIOXO-1,4,4A,5,6,7,8,8A-OCTAHYDRONAPHTHALENE-2-CARBONITRILE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 7-CHLOR-2-CYANO-ISO-TETRACYCLINE # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 2TC doub 1 n n C1 C2 2TC sing 2 n n C1 C1C 2TC sing 3 n n C2 C21 2TC sing 4 n n C2 C3 2TC doub 5 n n C21 N21 2TC trip 6 n n C3 O3 2TC sing 7 n n C3 C4 2TC sing 8 n n C4 N4 2TC sing 9 n n C4 C41 2TC sing 10 n n N4 C42 2TC sing 11 n n N4 C43 2TC sing 12 n n C41 C5 2TC sing 13 n n C41 C1C 2TC sing 14 n n C5 C51 2TC sing 15 n n C51 C6 2TC sing 16 n n C51 C1B 2TC sing 17 n n C6 C62 2TC sing 18 n n C6 O6 2TC sing 19 n n C6 C61 2TC sing 20 n n O6 C11 2TC sing 21 n n C61 C7 2TC sing 22 n y C61 C1A 2TC doub 23 n y C7 C8 2TC doub 24 n y C7 CL7 2TC sing 25 n n C8 C9 2TC sing 26 n y C9 C10 2TC doub 27 n y C10 O10 2TC sing 28 n n C10 C1A 2TC sing 29 n y C1A C11 2TC sing 30 n n O11 C11 2TC doub 31 n n C1B C12 2TC sing 32 n n C12 O12 2TC doub 33 n n C12 C1C 2TC sing 34 n n C1C O1C 2TC sing 35 n n O3 H3 2TC sing 36 n n C4 H4 2TC sing 37 n n C41 H41 2TC sing 38 n n C42 H421 2TC sing 39 n n C42 H422 2TC sing 40 n n C42 H423 2TC sing 41 n n C43 H431 2TC sing 42 n n C43 H432 2TC sing 43 n n C43 H433 2TC sing 44 n n C5 H51C 2TC sing 45 n n C5 H52C 2TC sing 46 n n C51 H51 2TC sing 47 n n C1B H1B 2TC sing 48 n n C62 H621 2TC sing 49 n n C62 H622 2TC sing 50 n n C62 H623 2TC sing 51 n n C8 H8 2TC sing 52 n n C9 H9 2TC sing 53 n n O10 H10 2TC sing 54 n n C1B H2B 2TC sing 55 n n O1C H1C 2TC sing 56 n n # _atom_sites.entry_id 2X6O _atom_sites.fract_transf_matrix[1][1] 0.014482 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014482 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005537 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 2TC A 1 1209 1209 2TC 2TC . C 3 CL A 1 1210 1210 CL CL . D 3 CL A 1 1211 1211 CL CL . E 4 HOH A 1 2001 2001 HOH HOH . E 4 HOH A 2 2002 2002 HOH HOH . E 4 HOH A 3 2003 2003 HOH HOH . E 4 HOH A 4 2004 2004 HOH HOH . E 4 HOH A 5 2005 2005 HOH HOH . E 4 HOH A 6 2006 2006 HOH HOH . E 4 HOH A 7 2007 2007 HOH HOH . E 4 HOH A 8 2008 2008 HOH HOH . E 4 HOH A 9 2009 2009 HOH HOH . E 4 HOH A 10 2010 2010 HOH HOH . E 4 HOH A 11 2011 2011 HOH HOH . E 4 HOH A 12 2012 2012 HOH HOH . E 4 HOH A 13 2013 2013 HOH HOH . E 4 HOH A 14 2014 2014 HOH HOH . E 4 HOH A 15 2015 2015 HOH HOH . E 4 HOH A 16 2016 2016 HOH HOH . E 4 HOH A 17 2017 2017 HOH HOH . E 4 HOH A 18 2018 2018 HOH HOH . E 4 HOH A 19 2019 2019 HOH HOH . E 4 HOH A 20 2020 2020 HOH HOH . E 4 HOH A 21 2021 2021 HOH HOH . E 4 HOH A 22 2022 2022 HOH HOH . E 4 HOH A 23 2023 2023 HOH HOH . E 4 HOH A 24 2024 2024 HOH HOH . E 4 HOH A 25 2025 2025 HOH HOH . E 4 HOH A 26 2026 2026 HOH HOH . E 4 HOH A 27 2027 2027 HOH HOH . E 4 HOH A 28 2028 2028 HOH HOH . E 4 HOH A 29 2029 2029 HOH HOH . E 4 HOH A 30 2030 2030 HOH HOH . E 4 HOH A 31 2031 2031 HOH HOH . E 4 HOH A 32 2032 2032 HOH HOH . E 4 HOH A 33 2033 2033 HOH HOH . E 4 HOH A 34 2034 2034 HOH HOH . E 4 HOH A 35 2035 2035 HOH HOH . E 4 HOH A 36 2036 2036 HOH HOH . E 4 HOH A 37 2037 2037 HOH HOH . E 4 HOH A 38 2038 2038 HOH HOH . E 4 HOH A 39 2039 2039 HOH HOH . E 4 HOH A 40 2040 2040 HOH HOH . E 4 HOH A 41 2041 2041 HOH HOH . E 4 HOH A 42 2042 2042 HOH HOH . E 4 HOH A 43 2043 2043 HOH HOH . E 4 HOH A 44 2044 2044 HOH HOH . E 4 HOH A 45 2045 2045 HOH HOH . E 4 HOH A 46 2046 2046 HOH HOH . E 4 HOH A 47 2047 2047 HOH HOH . E 4 HOH A 48 2048 2048 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 2TC . . . B 2 20.969 35.158 33.947 1 71.82 ? C1 2TC 1209 A 1 HETATM 2 O O1 2TC . . . B 2 20.61 35.693 32.862 1 75.52 ? O1 2TC 1209 A 1 HETATM 3 C C2 2TC . . . B 2 20.075 34.295 34.732 1 72.85 ? C2 2TC 1209 A 1 HETATM 4 C C21 2TC . . . B 2 18.917 33.627 34.101 1 77.47 ? C21 2TC 1209 A 1 HETATM 5 N N21 2TC . . . B 2 17.996 33.086 33.635 1 80.05 ? N21 2TC 1209 A 1 HETATM 6 C C3 2TC . . . B 2 20.343 34.047 36.067 1 74.4 ? C3 2TC 1209 A 1 HETATM 7 O O3 2TC . . . B 2 19.517 33.218 36.733 1 75.09 ? O3 2TC 1209 A 1 HETATM 8 C C4 2TC . . . B 2 21.481 34.716 36.848 1 75.77 ? C4 2TC 1209 A 1 HETATM 9 N N4 2TC . . . B 2 22.315 33.783 37.688 1 83.9 ? N4 2TC 1209 A 1 HETATM 10 C C43 2TC . . . B 2 22.967 34.457 38.816 1 89.5 ? C43 2TC 1209 A 1 HETATM 11 C C42 2TC . . . B 2 23.348 32.997 37.011 1 87.04 ? C42 2TC 1209 A 1 HETATM 12 C C41 2TC . . . B 2 22.333 35.699 35.974 1 71.69 ? C41 2TC 1209 A 1 HETATM 13 C C5 2TC . . . B 2 21.876 37.167 36.12 1 69.99 ? C5 2TC 1209 A 1 HETATM 14 C C51 2TC . . . B 2 22.821 38.135 35.39 1 70.72 ? C51 2TC 1209 A 1 HETATM 15 C C6 2TC . . . B 2 22.539 39.634 35.614 1 74.43 ? C6 2TC 1209 A 1 HETATM 16 C C62 2TC . . . B 2 22.789 40.032 37.067 1 80.75 ? C62 2TC 1209 A 1 HETATM 17 O O6 2TC . . . B 2 21.189 40.035 35.308 1 74.54 ? O6 2TC 1209 A 1 HETATM 18 C C61 2TC . . . B 2 23.368 40.57 34.773 1 79.98 ? C61 2TC 1209 A 1 HETATM 19 C C7 2TC . . . B 2 24.763 40.653 34.639 1 83.09 ? C7 2TC 1209 A 1 HETATM 20 C C8 2TC . . . B 2 25.266 41.649 33.786 1 91.15 ? C8 2TC 1209 A 1 HETATM 21 C C9 2TC . . . B 2 24.406 42.544 33.104 1 93.22 ? C9 2TC 1209 A 1 HETATM 22 C C10 2TC . . . B 2 23.027 42.439 33.272 1 87.57 ? C10 2TC 1209 A 1 HETATM 23 O O10 2TC . . . B 2 22.188 43.247 32.658 1 92.33 ? O10 2TC 1209 A 1 HETATM 24 C C1A 2TC . . . B 2 22.54 41.454 34.118 1 81.46 ? C1A 2TC 1209 A 1 HETATM 25 O O11 2TC . . . B 2 20.159 41.815 33.853 1 84.04 ? O11 2TC 1209 A 1 HETATM 26 C C1B 2TC . . . B 2 22.799 37.733 33.954 1 71.68 ? C1B 2TC 1209 A 1 HETATM 27 C C12 2TC . . . B 2 23.167 36.445 33.756 1 74.2 ? C12 2TC 1209 A 1 HETATM 28 O O12 2TC . . . B 2 24.189 36.207 32.982 1 78.64 ? O12 2TC 1209 A 1 HETATM 29 C C1C 2TC . . . B 2 22.402 35.346 34.487 1 72.29 ? C1C 2TC 1209 A 1 HETATM 30 CL CL7 2TC . . . B 2 25.884 39.522 35.487 1 84.57 ? CL7 2TC 1209 A 1 HETATM 31 C C11 2TC . . . B 2 21.144 41.175 34.393 1 78.05 ? C11 2TC 1209 A 1 HETATM 32 O O1C 2TC . . . B 2 23.091 34.099 34.415 1 76.34 ? O1C 2TC 1209 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 22 _model_server_stats.query_time_ms 308 _model_server_stats.encode_time_ms 9 _model_server_stats.element_count 32 #