data_2X7F # _model_server_result.job_id APWtFEX3snPg8dC83My4mw _model_server_result.datetime_utc '2024-11-08 04:00:54' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2x7f # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":500}' # _entry.id 2X7F # _exptl.entry_id 2X7F _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 328.321 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 9-HYDROXY-4-PHENYLPYRROLO[3,4-C]CARBAZOLE-1,3(2H,6H)-DIONE _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 91.87 _cell.angle_gamma 90 _cell.entry_id 2X7F _cell.length_a 52.972 _cell.length_b 79.074 _cell.length_c 214.159 _cell.Z_PDB 10 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2X7F _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 PISA monomeric 1 author_and_software_defined_assembly 3 PISA monomeric 1 author_and_software_defined_assembly 4 PISA monomeric 1 author_and_software_defined_assembly 5 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,F,G 1 1 B,H,I,P 2 1 C,J,K,Q 3 1 D,L,M 4 1 E,N,O 5 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 F N N ? 2 H N N ? 2 J N N ? 2 L N N ? 2 N N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O SER 78 A SER 77 1_555 G NA NA . A NA 1315 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.551 ? metalc ? metalc2 A O HIS 80 A HIS 79 1_555 G NA NA . A NA 1315 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.442 ? metalc ? metalc3 A O ILE 83 A ILE 82 1_555 G NA NA . A NA 1315 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.432 ? metalc ? metalc4 A OG1 THR 85 A THR 84 1_555 G NA NA . A NA 1315 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.28 ? metalc ? metalc5 B O SER 78 B SER 77 1_555 I NA NA . B NA 1315 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.388 ? metalc ? metalc6 B O HIS 80 B HIS 79 1_555 I NA NA . B NA 1315 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.345 ? metalc ? metalc7 B O ILE 83 B ILE 82 1_555 I NA NA . B NA 1315 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.595 ? metalc ? metalc8 B OG1 THR 85 B THR 84 1_555 I NA NA . B NA 1315 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.413 ? metalc ? metalc9 I NA NA . B NA 1315 1_555 P O HOH . B HOH 2008 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.25 ? metalc ? metalc10 C O SER 78 C SER 77 1_555 K NA NA . C NA 1315 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.168 ? metalc ? metalc11 C O HIS 80 C HIS 79 1_555 K NA NA . C NA 1315 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.542 ? metalc ? metalc12 C O ILE 83 C ILE 82 1_555 K NA NA . C NA 1315 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.402 ? metalc ? metalc13 C OG1 THR 85 C THR 84 1_555 K NA NA . C NA 1315 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.225 ? metalc ? metalc14 D O SER 78 D SER 77 1_555 M NA NA . D NA 1308 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.531 ? metalc ? metalc15 D N HIS 80 D HIS 79 1_555 M NA NA . D NA 1308 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.192 ? metalc ? metalc16 D O HIS 80 D HIS 79 1_555 M NA NA . D NA 1308 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.237 ? metalc ? metalc17 D O ILE 83 D ILE 82 1_555 M NA NA . D NA 1308 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.834 ? metalc ? metalc18 D OG1 THR 85 D THR 84 1_555 M NA NA . D NA 1308 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.237 ? metalc ? metalc19 E O SER 78 E SER 77 1_555 O NA NA . E NA 1311 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.241 ? metalc ? metalc20 E O HIS 80 E HIS 79 1_555 O NA NA . E NA 1311 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.27 ? metalc ? metalc21 E O ILE 83 E ILE 82 1_555 O NA NA . E NA 1311 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.405 ? metalc ? metalc22 E OG1 THR 85 E THR 84 1_555 O NA NA . E NA 1311 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.382 ? # _chem_comp.formula 'C20 H12 N2 O3' _chem_comp.formula_weight 328.321 _chem_comp.id 824 _chem_comp.mon_nstd_flag . _chem_comp.name 9-HYDROXY-4-PHENYLPYRROLO[3,4-C]CARBAZOLE-1,3(2H,6H)-DIONE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 9-HYDROXY-4-PHENYL-6H-PYRROLO[3,4-C]CARBAZOLE-1,3-DIONE # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O3 C19 824 sing 1 n n O3 HO3 824 sing 2 n n C19 C20 824 sing 3 n y C19 C17 824 doub 4 n y C20 C18 824 doub 5 n y C20 H20 824 sing 6 n n C18 C16 824 sing 7 n y C18 H18 824 sing 8 n n C16 C15 824 doub 9 n y C16 N2 824 sing 10 n y C15 C17 824 sing 11 n y C15 C13 824 sing 12 n y C17 H17 824 sing 13 n n C13 C14 824 sing 14 n y C13 C4 824 doub 15 n y C14 N2 824 sing 16 n y C14 C1 824 doub 17 n y N2 HN2 824 sing 18 n n C4 C5 824 sing 19 n n C4 C3 824 sing 20 n y C5 O1 824 doub 21 n n C5 N1 824 sing 22 n n C3 C6 824 sing 23 n n C3 C2 824 doub 24 n y C6 O2 824 doub 25 n n C6 N1 824 sing 26 n n N1 HN1 824 sing 27 n n C2 C1 824 sing 28 n y C2 C7 824 sing 29 n y C1 H1 824 sing 30 n n C7 C8 824 doub 31 n y C7 C12 824 sing 32 n y C8 C9 824 sing 33 n y C8 H8 824 sing 34 n n C9 C10 824 doub 35 n y C9 H9 824 sing 36 n n C10 C11 824 sing 37 n y C10 H10 824 sing 38 n n C11 C12 824 doub 39 n y C11 H11 824 sing 40 n n C12 H12 824 sing 41 n n # _atom_sites.entry_id 2X7F _atom_sites.fract_transf_matrix[1][1] 0.018878 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000616 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012646 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004672 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code F 2 824 A 1 500 500 824 824 . G 3 NA A 1 1315 1315 NA NA . H 2 824 B 1 500 500 824 824 . I 3 NA B 1 1315 1315 NA NA . J 2 824 C 1 500 500 824 824 . K 3 NA C 1 1315 1315 NA NA . L 2 824 D 1 500 500 824 824 . M 3 NA D 1 1308 1308 NA NA . N 2 824 E 1 500 500 824 824 . O 3 NA E 1 1311 1311 NA NA . P 4 HOH B 1 2001 2001 HOH HOH . P 4 HOH B 2 2002 2002 HOH HOH . P 4 HOH B 3 2003 2003 HOH HOH . P 4 HOH B 4 2004 2004 HOH HOH . P 4 HOH B 5 2005 2005 HOH HOH . P 4 HOH B 6 2006 2006 HOH HOH . P 4 HOH B 7 2007 2007 HOH HOH . P 4 HOH B 8 2008 2008 HOH HOH . P 4 HOH B 9 2009 2009 HOH HOH . P 4 HOH B 10 2010 2010 HOH HOH . P 4 HOH B 11 2011 2011 HOH HOH . P 4 HOH B 12 2012 2012 HOH HOH . P 4 HOH B 13 2013 2013 HOH HOH . P 4 HOH B 14 2014 2014 HOH HOH . Q 4 HOH C 1 2001 2001 HOH HOH . Q 4 HOH C 2 2002 2002 HOH HOH . Q 4 HOH C 3 2003 2003 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O3 824 . . . F 2 24.73 -10.986 55.74 1 66.98 ? O3 824 500 A 1 HETATM 2 C C19 824 . . . F 2 25.572 -9.896 55.484 1 69.13 ? C19 824 500 A 1 HETATM 3 C C20 824 . . . F 2 26.273 -9.928 54.309 1 66.79 ? C20 824 500 A 1 HETATM 4 C C18 824 . . . F 2 27.162 -8.897 53.924 1 65.34 ? C18 824 500 A 1 HETATM 5 C C16 824 . . . F 2 27.37 -7.712 54.782 1 65.76 ? C16 824 500 A 1 HETATM 6 C C15 824 . . . F 2 26.574 -7.651 56.101 1 67.75 ? C15 824 500 A 1 HETATM 7 C C17 824 . . . F 2 25.637 -8.761 56.518 1 70.8 ? C17 824 500 A 1 HETATM 8 C C13 824 . . . F 2 26.949 -6.419 56.696 1 64.87 ? C13 824 500 A 1 HETATM 9 C C14 824 . . . F 2 27.879 -5.848 55.75 1 60.6 ? C14 824 500 A 1 HETATM 10 N N2 824 . . . F 2 28.115 -6.607 54.694 1 62.84 ? N2 824 500 A 1 HETATM 11 C C4 824 . . . F 2 26.542 -5.814 57.873 1 65.08 ? C4 824 500 A 1 HETATM 12 C C5 824 . . . F 2 25.689 -6.1 58.863 1 65.75 ? C5 824 500 A 1 HETATM 13 O O1 824 . . . F 2 25.096 -7.015 58.989 1 67.44 ? O1 824 500 A 1 HETATM 14 C C3 824 . . . F 2 27.085 -4.507 58.188 1 61.95 ? C3 824 500 A 1 HETATM 15 C C6 824 . . . F 2 26.471 -4.202 59.357 1 62.68 ? C6 824 500 A 1 HETATM 16 O O2 824 . . . F 2 26.566 -3.243 59.959 1 61.33 ? O2 824 500 A 1 HETATM 17 N N1 824 . . . F 2 25.594 -5.135 59.795 1 64.24 ? N1 824 500 A 1 HETATM 18 C C2 824 . . . F 2 28.051 -3.938 57.254 1 58.84 ? C2 824 500 A 1 HETATM 19 C C1 824 . . . F 2 28.418 -4.634 56.027 1 58.95 ? C1 824 500 A 1 HETATM 20 C C7 824 . . . F 2 28.753 -2.731 57.405 1 57.03 ? C7 824 500 A 1 HETATM 21 C C8 824 . . . F 2 29.009 -1.7 56.561 1 54.15 ? C8 824 500 A 1 HETATM 22 C C9 824 . . . F 2 29.731 -0.586 57.002 1 53.11 ? C9 824 500 A 1 HETATM 23 C C10 824 . . . F 2 30.236 -0.436 58.266 1 55.14 ? C10 824 500 A 1 HETATM 24 C C11 824 . . . F 2 30.049 -1.449 59.234 1 58.35 ? C11 824 500 A 1 HETATM 25 C C12 824 . . . F 2 29.314 -2.63 58.794 1 56.59 ? C12 824 500 A 1 # _model_server_stats.io_time_ms 24 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 36 _model_server_stats.query_time_ms 333 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 25 #