data_2X99 # _model_server_result.job_id '_CZF4J8xdBPAnbVVqs0vnw' _model_server_result.datetime_utc '2025-01-10 10:08:55' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2x99 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":608}' # _entry.id 2X99 # _exptl.entry_id 2X99 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 106.12 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description DI(HYDROXYETHYL)ETHER _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 112.82 _cell.angle_gamma 90 _cell.entry_id 2X99 _cell.length_a 141.502 _cell.length_b 102.61 _cell.length_c 59.938 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2X99 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -x,y,-z -1 0 0 0 1 0 0 0 -1 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 6 G N N ? 6 H N N ? 6 I N N ? 6 J N N ? 6 K N N ? 6 Q N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 154 A CYS 154 1_555 A SG CYS 159 A CYS 159 1_555 ? A ? ? A ? ? ? ? ? ? ? 2.051 ? covale ? covale1 A SG CYS 402 A CYS 402 1_555 E SG2 GSH . A GSH 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.199 ? metalc ? metalc1 A O ASP 565 A ASP 565 1_555 F CA CA . A CA 605 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.975 ? metalc ? metalc2 A O THR 567 A THR 567 1_555 F CA CA . A CA 605 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.728 ? metalc ? metalc3 A O THR 579 A THR 579 1_555 F CA CA . A CA 605 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.596 ? metalc ? metalc4 F CA CA . A CA 605 1_555 R O HOH . A HOH 798 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.756 ? metalc ? metalc5 A OE1 GLN 447 A GLN 447 1_555 F CA CA . A CA 605 2_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.063 ? # _chem_comp.formula 'C4 H10 O3' _chem_comp.formula_weight 106.12 _chem_comp.id PEG _chem_comp.mon_nstd_flag . _chem_comp.name DI(HYDROXYETHYL)ETHER _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 2X99 _atom_sites.fract_transf_matrix[1][1] 0.007067 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002974 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009746 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.018101 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 FAD A 1 601 1593 FAD FAD . C 3 NDP A 1 602 1594 NDP NDP . D 4 GSH A 1 603 1595 GSH GSH . E 4 GSH A 1 604 1596 GSH GSH . F 5 CA A 1 605 1597 CA CA . G 6 PEG A 1 606 1598 PEG PEG . H 6 PEG A 1 607 1599 PEG PEG . I 6 PEG A 1 608 1600 PEG PEG . J 6 PEG A 1 609 1601 PEG PEG . K 6 PEG A 1 610 1602 PEG PEG . L 7 PG4 A 1 611 1603 PG4 PG4 . M 7 PG4 A 1 612 1604 PG4 PG4 . N 7 PG4 A 1 613 1605 PG4 PG4 . O 7 PG4 A 1 614 1606 PG4 PG4 . P 7 PG4 A 1 615 1607 PG4 PG4 . Q 6 PEG A 1 616 1608 PEG PEG . R 8 HOH A 1 701 2183 HOH HOH . R 8 HOH A 2 702 2135 HOH HOH . R 8 HOH A 3 703 2119 HOH HOH . R 8 HOH A 4 704 2118 HOH HOH . R 8 HOH A 5 705 2149 HOH HOH . R 8 HOH A 6 706 2071 HOH HOH . R 8 HOH A 7 707 2162 HOH HOH . R 8 HOH A 8 708 2076 HOH HOH . R 8 HOH A 9 709 2169 HOH HOH . R 8 HOH A 10 710 2110 HOH HOH . R 8 HOH A 11 711 2081 HOH HOH . R 8 HOH A 12 712 2012 HOH HOH . R 8 HOH A 13 713 2132 HOH HOH . R 8 HOH A 14 714 2122 HOH HOH . R 8 HOH A 15 715 2075 HOH HOH . R 8 HOH A 16 716 2146 HOH HOH . R 8 HOH A 17 717 2121 HOH HOH . R 8 HOH A 18 718 2069 HOH HOH . R 8 HOH A 19 719 2143 HOH HOH . R 8 HOH A 20 720 2060 HOH HOH . R 8 HOH A 21 721 2077 HOH HOH . R 8 HOH A 22 722 2140 HOH HOH . R 8 HOH A 23 723 2016 HOH HOH . R 8 HOH A 24 724 2078 HOH HOH . R 8 HOH A 25 725 2028 HOH HOH . R 8 HOH A 26 726 2052 HOH HOH . R 8 HOH A 27 727 2066 HOH HOH . R 8 HOH A 28 728 2092 HOH HOH . R 8 HOH A 29 729 2127 HOH HOH . R 8 HOH A 30 730 2150 HOH HOH . R 8 HOH A 31 731 2171 HOH HOH . R 8 HOH A 32 732 2184 HOH HOH . R 8 HOH A 33 733 2058 HOH HOH . R 8 HOH A 34 734 2002 HOH HOH . R 8 HOH A 35 735 2105 HOH HOH . R 8 HOH A 36 736 2036 HOH HOH . R 8 HOH A 37 737 2072 HOH HOH . R 8 HOH A 38 738 2020 HOH HOH . R 8 HOH A 39 739 2137 HOH HOH . R 8 HOH A 40 740 2080 HOH HOH . R 8 HOH A 41 741 2124 HOH HOH . R 8 HOH A 42 742 2063 HOH HOH . R 8 HOH A 43 743 2107 HOH HOH . R 8 HOH A 44 744 2177 HOH HOH . R 8 HOH A 45 745 2115 HOH HOH . R 8 HOH A 46 746 2054 HOH HOH . R 8 HOH A 47 747 2068 HOH HOH . R 8 HOH A 48 748 2174 HOH HOH . R 8 HOH A 49 749 2111 HOH HOH . R 8 HOH A 50 750 2133 HOH HOH . R 8 HOH A 51 751 2175 HOH HOH . R 8 HOH A 52 752 2026 HOH HOH . R 8 HOH A 53 753 2164 HOH HOH . R 8 HOH A 54 754 2161 HOH HOH . R 8 HOH A 55 755 2108 HOH HOH . R 8 HOH A 56 756 2098 HOH HOH . R 8 HOH A 57 757 2055 HOH HOH . R 8 HOH A 58 758 2142 HOH HOH . R 8 HOH A 59 759 2099 HOH HOH . R 8 HOH A 60 760 2065 HOH HOH . R 8 HOH A 61 761 2157 HOH HOH . R 8 HOH A 62 762 2172 HOH HOH . R 8 HOH A 63 763 2086 HOH HOH . R 8 HOH A 64 764 2163 HOH HOH . R 8 HOH A 65 765 2167 HOH HOH . R 8 HOH A 66 766 2027 HOH HOH . R 8 HOH A 67 767 2083 HOH HOH . R 8 HOH A 68 768 2001 HOH HOH . R 8 HOH A 69 769 2178 HOH HOH . R 8 HOH A 70 770 2064 HOH HOH . R 8 HOH A 71 771 2038 HOH HOH . R 8 HOH A 72 772 2159 HOH HOH . R 8 HOH A 73 773 2088 HOH HOH . R 8 HOH A 74 774 2144 HOH HOH . R 8 HOH A 75 775 2095 HOH HOH . R 8 HOH A 76 776 2173 HOH HOH . R 8 HOH A 77 777 2128 HOH HOH . R 8 HOH A 78 778 2147 HOH HOH . R 8 HOH A 79 779 2170 HOH HOH . R 8 HOH A 80 780 2131 HOH HOH . R 8 HOH A 81 781 2089 HOH HOH . R 8 HOH A 82 782 2043 HOH HOH . R 8 HOH A 83 783 2117 HOH HOH . R 8 HOH A 84 784 2041 HOH HOH . R 8 HOH A 85 785 2180 HOH HOH . R 8 HOH A 86 786 2029 HOH HOH . R 8 HOH A 87 787 2035 HOH HOH . R 8 HOH A 88 788 2082 HOH HOH . R 8 HOH A 89 789 2040 HOH HOH . R 8 HOH A 90 790 2091 HOH HOH . R 8 HOH A 91 791 2126 HOH HOH . R 8 HOH A 92 792 2067 HOH HOH . R 8 HOH A 93 793 2176 HOH HOH . R 8 HOH A 94 794 2074 HOH HOH . R 8 HOH A 95 795 2017 HOH HOH . R 8 HOH A 96 796 2139 HOH HOH . R 8 HOH A 97 797 2073 HOH HOH . R 8 HOH A 98 798 2166 HOH HOH . R 8 HOH A 99 799 2134 HOH HOH . R 8 HOH A 100 800 2005 HOH HOH . R 8 HOH A 101 801 2129 HOH HOH . R 8 HOH A 102 802 2009 HOH HOH . R 8 HOH A 103 803 2094 HOH HOH . R 8 HOH A 104 804 2037 HOH HOH . R 8 HOH A 105 805 2152 HOH HOH . R 8 HOH A 106 806 2106 HOH HOH . R 8 HOH A 107 807 2165 HOH HOH . R 8 HOH A 108 808 2033 HOH HOH . R 8 HOH A 109 809 2125 HOH HOH . R 8 HOH A 110 810 2160 HOH HOH . R 8 HOH A 111 811 2158 HOH HOH . R 8 HOH A 112 812 2102 HOH HOH . R 8 HOH A 113 813 2141 HOH HOH . R 8 HOH A 114 814 2136 HOH HOH . R 8 HOH A 115 815 2153 HOH HOH . R 8 HOH A 116 816 2093 HOH HOH . R 8 HOH A 117 817 2103 HOH HOH . R 8 HOH A 118 818 2003 HOH HOH . R 8 HOH A 119 819 2006 HOH HOH . R 8 HOH A 120 820 2059 HOH HOH . R 8 HOH A 121 821 2154 HOH HOH . R 8 HOH A 122 822 2021 HOH HOH . R 8 HOH A 123 823 2168 HOH HOH . R 8 HOH A 124 824 2114 HOH HOH . R 8 HOH A 125 825 2151 HOH HOH . R 8 HOH A 126 826 2008 HOH HOH . R 8 HOH A 127 827 2100 HOH HOH . R 8 HOH A 128 828 2101 HOH HOH . R 8 HOH A 129 829 2096 HOH HOH . R 8 HOH A 130 830 2025 HOH HOH . R 8 HOH A 131 831 2181 HOH HOH . R 8 HOH A 132 832 2109 HOH HOH . R 8 HOH A 133 833 2087 HOH HOH . R 8 HOH A 134 834 2048 HOH HOH . R 8 HOH A 135 835 2010 HOH HOH . R 8 HOH A 136 836 2138 HOH HOH . R 8 HOH A 137 837 2001 HOH HOH . R 8 HOH A 138 838 2090 HOH HOH . R 8 HOH A 139 839 2182 HOH HOH . R 8 HOH A 140 840 2097 HOH HOH . R 8 HOH A 141 841 2030 HOH HOH . R 8 HOH A 142 842 2123 HOH HOH . R 8 HOH A 143 843 2130 HOH HOH . R 8 HOH A 144 844 2079 HOH HOH . R 8 HOH A 145 845 2070 HOH HOH . R 8 HOH A 146 846 2046 HOH HOH . R 8 HOH A 147 847 2011 HOH HOH . R 8 HOH A 148 848 2116 HOH HOH . R 8 HOH A 149 849 2155 HOH HOH . R 8 HOH A 150 850 2019 HOH HOH . R 8 HOH A 151 851 2156 HOH HOH . R 8 HOH A 152 852 2031 HOH HOH . R 8 HOH A 153 853 2051 HOH HOH . R 8 HOH A 154 854 2050 HOH HOH . R 8 HOH A 155 855 2018 HOH HOH . R 8 HOH A 156 856 2042 HOH HOH . R 8 HOH A 157 857 2044 HOH HOH . R 8 HOH A 158 858 2084 HOH HOH . R 8 HOH A 159 859 2045 HOH HOH . R 8 HOH A 160 860 2013 HOH HOH . R 8 HOH A 161 861 2007 HOH HOH . R 8 HOH A 162 862 2062 HOH HOH . R 8 HOH A 163 863 2034 HOH HOH . R 8 HOH A 164 864 2057 HOH HOH . R 8 HOH A 165 865 2148 HOH HOH . R 8 HOH A 166 866 2015 HOH HOH . R 8 HOH A 167 867 2039 HOH HOH . R 8 HOH A 168 868 2112 HOH HOH . R 8 HOH A 169 869 2047 HOH HOH . R 8 HOH A 170 870 2056 HOH HOH . R 8 HOH A 171 871 2022 HOH HOH . R 8 HOH A 172 872 2024 HOH HOH . R 8 HOH A 173 873 2120 HOH HOH . R 8 HOH A 174 874 2004 HOH HOH . R 8 HOH A 175 875 2179 HOH HOH . R 8 HOH A 176 876 2145 HOH HOH . R 8 HOH A 177 877 2113 HOH HOH . R 8 HOH A 178 878 2085 HOH HOH . R 8 HOH A 179 879 2053 HOH HOH . R 8 HOH A 180 880 2014 HOH HOH . R 8 HOH A 181 881 2023 HOH HOH . R 8 HOH A 182 882 2061 HOH HOH . R 8 HOH A 183 883 2049 HOH HOH . R 8 HOH A 184 884 2104 HOH HOH . R 8 HOH A 185 885 2032 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PEG . . . I 6 -4.401 -5.654 7.193 1 47.01 ? C1 PEG 608 A 1 HETATM 2 O O1 PEG . . . I 6 -4.903 -6.96 6.88 1 45.03 ? O1 PEG 608 A 1 HETATM 3 C C2 PEG . . . I 6 -3.646 -5.093 5.996 1 47.95 ? C2 PEG 608 A 1 HETATM 4 O O2 PEG . . . I 6 -4.422 -5.358 4.832 1 50.44 ? O2 PEG 608 A 1 HETATM 5 C C3 PEG . . . I 6 -3.755 -5.04 3.612 1 50.63 ? C3 PEG 608 A 1 HETATM 6 C C4 PEG . . . I 6 -4.795 -4.775 2.525 1 50.62 ? C4 PEG 608 A 1 HETATM 7 O O4 PEG . . . I 6 -4.981 -5.97 1.75 1 51.74 ? O4 PEG 608 A 1 # _model_server_stats.io_time_ms 31 _model_server_stats.parse_time_ms 19 _model_server_stats.create_model_time_ms 45 _model_server_stats.query_time_ms 322 _model_server_stats.encode_time_ms 12 _model_server_stats.element_count 7 #