data_2XAM # _model_server_result.job_id 58bbtiWfU7UTJ1zVh68u2Q _model_server_result.datetime_utc '2024-11-17 03:27:00' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2xam # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"K","auth_seq_id":1030}' # _entry.id 2XAM # _exptl.entry_id 2XAM _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2XAM _cell.length_a 58.124 _cell.length_b 113.591 _cell.length_c 142.478 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2XAM _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,M 1 1 B,H,I,J,K,L,N 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 F N N ? 5 G N N ? 5 K N N ? 5 L N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A ND1 HIS 320 A HIS 320 1_555 E ZN ZN . A ZN 700 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.165 ? metalc ? metalc2 A SG CYS 330 A CYS 330 1_555 E ZN ZN . A ZN 700 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.018 ? metalc ? metalc3 A SG CYS 333 A CYS 333 1_555 E ZN ZN . A ZN 700 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.374 ? metalc ? metalc4 A NE2 HIS 346 A HIS 346 1_555 E ZN ZN . A ZN 700 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.935 ? metalc ? metalc5 A OD1 ASP 407 A ASP 407 1_555 F MG MG . A MG 1128 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.679 ? metalc ? metalc6 A OD2 ASP 407 A ASP 407 1_555 G MG MG . A MG 1129 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.979 ? metalc ? metalc7 A OG SER 409 A SER 409 1_555 F MG MG . A MG 1128 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.928 ? metalc ? metalc8 C O43 IHP . A IHP 500 1_555 G MG MG . A MG 1129 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.38 ? metalc ? metalc9 D O1B ADP . A ADP 600 1_555 F MG MG . A MG 1128 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.914 ? metalc ? metalc10 D O3B ADP . A ADP 600 1_555 G MG MG . A MG 1129 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.16 ? metalc ? metalc11 D O2A ADP . A ADP 600 1_555 G MG MG . A MG 1129 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.34 ? metalc ? metalc12 G MG MG . A MG 1129 1_555 M O HOH . A HOH 2076 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.642 ? metalc ? metalc13 G MG MG . A MG 1129 1_555 M O HOH . A HOH 2091 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.289 ? metalc ? metalc14 B ND1 HIS 320 B HIS 320 1_555 J ZN ZN . B ZN 700 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.259 ? metalc ? metalc15 B SG CYS 330 B CYS 330 1_555 J ZN ZN . B ZN 700 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.302 ? metalc ? metalc16 B SG CYS 333 B CYS 333 1_555 J ZN ZN . B ZN 700 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.071 ? metalc ? metalc17 B NE2 HIS 346 B HIS 346 1_555 J ZN ZN . B ZN 700 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.915 ? metalc ? metalc18 B OD2 ASP 407 B ASP 407 1_555 K MG MG . B MG 1030 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.991 ? metalc ? metalc19 B OD1 ASP 407 B ASP 407 1_555 L MG MG . B MG 1031 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.739 ? metalc ? metalc20 H O43 IHP . B IHP 500 1_555 K MG MG . B MG 1030 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.323 ? metalc ? metalc21 I O1B ADP . B ADP 600 1_555 K MG MG . B MG 1030 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.29 ? metalc ? metalc22 I O1A ADP . B ADP 600 1_555 K MG MG . B MG 1030 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.309 ? metalc ? metalc23 I O2B ADP . B ADP 600 1_555 L MG MG . B MG 1031 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.789 ? metalc ? metalc24 I O1B ADP . B ADP 600 1_555 L MG MG . B MG 1031 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.883 ? metalc ? metalc25 K MG MG . B MG 1030 1_555 N O HOH . B HOH 2087 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.467 ? metalc ? metalc26 K MG MG . B MG 1030 1_555 N O HOH . B HOH 2097 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.326 ? metalc ? metalc27 L MG MG . B MG 1031 1_555 N O HOH . B HOH 2094 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.917 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 2XAM _atom_sites.fract_transf_matrix[1][1] 0.017205 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008804 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007019 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 IHP A 1 500 500 IHP I6P . D 3 ADP A 1 600 600 ADP ADP . E 4 ZN A 1 700 700 ZN ZN . F 5 MG A 1 1128 1128 MG MG . G 5 MG A 1 1129 1129 MG MG . H 2 IHP B 1 500 500 IHP I6P . I 3 ADP B 1 600 600 ADP ADP . J 4 ZN B 1 700 700 ZN ZN . K 5 MG B 1 1030 1030 MG MG . L 5 MG B 1 1031 1031 MG MG . M 6 HOH A 1 2001 2001 HOH HOH . M 6 HOH A 2 2002 2002 HOH HOH . M 6 HOH A 3 2003 2003 HOH HOH . M 6 HOH A 4 2006 2006 HOH HOH . M 6 HOH A 5 2007 2007 HOH HOH . M 6 HOH A 6 2008 2008 HOH HOH . M 6 HOH A 7 2009 2009 HOH HOH . M 6 HOH A 8 2010 2010 HOH HOH . M 6 HOH A 9 2011 2011 HOH HOH . M 6 HOH A 10 2012 2012 HOH HOH . M 6 HOH A 11 2013 2013 HOH HOH . M 6 HOH A 12 2014 2014 HOH HOH . M 6 HOH A 13 2015 2015 HOH HOH . M 6 HOH A 14 2016 2016 HOH HOH . M 6 HOH A 15 2017 2017 HOH HOH . M 6 HOH A 16 2018 2018 HOH HOH . M 6 HOH A 17 2019 2019 HOH HOH . M 6 HOH A 18 2020 2020 HOH HOH . M 6 HOH A 19 2021 2021 HOH HOH . M 6 HOH A 20 2022 2022 HOH HOH . M 6 HOH A 21 2023 2023 HOH HOH . M 6 HOH A 22 2024 2024 HOH HOH . M 6 HOH A 23 2025 2025 HOH HOH . M 6 HOH A 24 2026 2026 HOH HOH . M 6 HOH A 25 2027 2027 HOH HOH . M 6 HOH A 26 2028 2028 HOH HOH . M 6 HOH A 27 2029 2029 HOH HOH . M 6 HOH A 28 2030 2030 HOH HOH . M 6 HOH A 29 2031 2031 HOH HOH . M 6 HOH A 30 2032 2032 HOH HOH . M 6 HOH A 31 2033 2033 HOH HOH . M 6 HOH A 32 2034 2034 HOH HOH . M 6 HOH A 33 2035 2035 HOH HOH . M 6 HOH A 34 2036 2036 HOH HOH . M 6 HOH A 35 2037 2037 HOH HOH . M 6 HOH A 36 2038 2038 HOH HOH . M 6 HOH A 37 2039 2039 HOH HOH . M 6 HOH A 38 2040 2040 HOH HOH . M 6 HOH A 39 2041 2041 HOH HOH . M 6 HOH A 40 2042 2042 HOH HOH . M 6 HOH A 41 2043 2043 HOH HOH . M 6 HOH A 42 2044 2044 HOH HOH . M 6 HOH A 43 2045 2045 HOH HOH . M 6 HOH A 44 2046 2046 HOH HOH . M 6 HOH A 45 2047 2047 HOH HOH . M 6 HOH A 46 2048 2048 HOH HOH . M 6 HOH A 47 2049 2049 HOH HOH . M 6 HOH A 48 2050 2050 HOH HOH . M 6 HOH A 49 2051 2051 HOH HOH . M 6 HOH A 50 2052 2052 HOH HOH . M 6 HOH A 51 2053 2053 HOH HOH . M 6 HOH A 52 2054 2054 HOH HOH . M 6 HOH A 53 2055 2055 HOH HOH . M 6 HOH A 54 2056 2056 HOH HOH . M 6 HOH A 55 2057 2057 HOH HOH . M 6 HOH A 56 2058 2058 HOH HOH . M 6 HOH A 57 2059 2059 HOH HOH . M 6 HOH A 58 2060 2060 HOH HOH . M 6 HOH A 59 2061 2061 HOH HOH . M 6 HOH A 60 2062 2062 HOH HOH . M 6 HOH A 61 2063 2063 HOH HOH . M 6 HOH A 62 2064 2064 HOH HOH . M 6 HOH A 63 2065 2065 HOH HOH . M 6 HOH A 64 2066 2066 HOH HOH . M 6 HOH A 65 2067 2067 HOH HOH . M 6 HOH A 66 2068 2068 HOH HOH . M 6 HOH A 67 2069 2069 HOH HOH . M 6 HOH A 68 2070 2070 HOH HOH . M 6 HOH A 69 2071 2071 HOH HOH . M 6 HOH A 70 2072 2072 HOH HOH . M 6 HOH A 71 2073 2073 HOH HOH . M 6 HOH A 72 2074 2074 HOH HOH . M 6 HOH A 73 2075 2075 HOH HOH . M 6 HOH A 74 2076 2076 HOH HOH . M 6 HOH A 75 2077 2077 HOH HOH . M 6 HOH A 76 2078 2078 HOH HOH . M 6 HOH A 77 2079 2079 HOH HOH . M 6 HOH A 78 2080 2080 HOH HOH . M 6 HOH A 79 2081 2081 HOH HOH . M 6 HOH A 80 2082 2082 HOH HOH . M 6 HOH A 81 2083 2083 HOH HOH . M 6 HOH A 82 2084 2084 HOH HOH . M 6 HOH A 83 2085 2085 HOH HOH . M 6 HOH A 84 2086 2086 HOH HOH . M 6 HOH A 85 2087 2087 HOH HOH . M 6 HOH A 86 2088 2088 HOH HOH . M 6 HOH A 87 2089 2089 HOH HOH . M 6 HOH A 88 2090 2090 HOH HOH . M 6 HOH A 89 2091 2091 HOH HOH . M 6 HOH A 90 2092 2092 HOH HOH . N 6 HOH B 1 2001 2001 HOH HOH . N 6 HOH B 2 2002 2002 HOH HOH . N 6 HOH B 3 2003 2003 HOH HOH . N 6 HOH B 4 2004 2004 HOH HOH . N 6 HOH B 5 2005 2005 HOH HOH . N 6 HOH B 6 2006 2006 HOH HOH . N 6 HOH B 7 2007 2007 HOH HOH . N 6 HOH B 8 2008 2008 HOH HOH . N 6 HOH B 9 2009 2009 HOH HOH . N 6 HOH B 10 2010 2010 HOH HOH . N 6 HOH B 11 2011 2011 HOH HOH . N 6 HOH B 12 2012 2012 HOH HOH . N 6 HOH B 13 2013 2013 HOH HOH . N 6 HOH B 14 2014 2014 HOH HOH . N 6 HOH B 15 2015 2015 HOH HOH . N 6 HOH B 16 2016 2016 HOH HOH . N 6 HOH B 17 2017 2017 HOH HOH . N 6 HOH B 18 2018 2018 HOH HOH . N 6 HOH B 19 2019 2019 HOH HOH . N 6 HOH B 20 2020 2020 HOH HOH . N 6 HOH B 21 2021 2021 HOH HOH . N 6 HOH B 22 2022 2022 HOH HOH . N 6 HOH B 23 2023 2023 HOH HOH . N 6 HOH B 24 2024 2024 HOH HOH . N 6 HOH B 25 2025 2025 HOH HOH . N 6 HOH B 26 2026 2026 HOH HOH . N 6 HOH B 27 2027 2027 HOH HOH . N 6 HOH B 28 2028 2028 HOH HOH . N 6 HOH B 29 2029 2029 HOH HOH . N 6 HOH B 30 2030 2030 HOH HOH . N 6 HOH B 31 2031 2031 HOH HOH . N 6 HOH B 32 2032 2032 HOH HOH . N 6 HOH B 33 2033 2033 HOH HOH . N 6 HOH B 34 2034 2034 HOH HOH . N 6 HOH B 35 2035 2035 HOH HOH . N 6 HOH B 36 2036 2036 HOH HOH . N 6 HOH B 37 2037 2037 HOH HOH . N 6 HOH B 38 2038 2038 HOH HOH . N 6 HOH B 39 2039 2039 HOH HOH . N 6 HOH B 40 2040 2040 HOH HOH . N 6 HOH B 41 2041 2041 HOH HOH . N 6 HOH B 42 2042 2042 HOH HOH . N 6 HOH B 43 2043 2043 HOH HOH . N 6 HOH B 44 2044 2044 HOH HOH . N 6 HOH B 45 2045 2045 HOH HOH . N 6 HOH B 46 2046 2046 HOH HOH . N 6 HOH B 47 2047 2047 HOH HOH . N 6 HOH B 48 2048 2048 HOH HOH . N 6 HOH B 49 2049 2049 HOH HOH . N 6 HOH B 50 2050 2050 HOH HOH . N 6 HOH B 51 2051 2051 HOH HOH . N 6 HOH B 52 2052 2052 HOH HOH . N 6 HOH B 53 2053 2053 HOH HOH . N 6 HOH B 54 2054 2054 HOH HOH . N 6 HOH B 55 2055 2055 HOH HOH . N 6 HOH B 56 2056 2056 HOH HOH . N 6 HOH B 57 2057 2057 HOH HOH . N 6 HOH B 58 2058 2058 HOH HOH . N 6 HOH B 59 2059 2059 HOH HOH . N 6 HOH B 60 2060 2060 HOH HOH . N 6 HOH B 61 2061 2061 HOH HOH . N 6 HOH B 62 2062 2062 HOH HOH . N 6 HOH B 63 2063 2063 HOH HOH . N 6 HOH B 64 2064 2064 HOH HOH . N 6 HOH B 65 2065 2065 HOH HOH . N 6 HOH B 66 2066 2066 HOH HOH . N 6 HOH B 67 2067 2067 HOH HOH . N 6 HOH B 68 2068 2068 HOH HOH . N 6 HOH B 69 2069 2069 HOH HOH . N 6 HOH B 70 2070 2070 HOH HOH . N 6 HOH B 71 2071 2071 HOH HOH . N 6 HOH B 72 2072 2072 HOH HOH . N 6 HOH B 73 2073 2073 HOH HOH . N 6 HOH B 74 2074 2074 HOH HOH . N 6 HOH B 75 2075 2075 HOH HOH . N 6 HOH B 76 2076 2076 HOH HOH . N 6 HOH B 77 2077 2077 HOH HOH . N 6 HOH B 78 2078 2078 HOH HOH . N 6 HOH B 79 2079 2079 HOH HOH . N 6 HOH B 80 2080 2080 HOH HOH . N 6 HOH B 81 2081 2081 HOH HOH . N 6 HOH B 82 2082 2082 HOH HOH . N 6 HOH B 83 2083 2083 HOH HOH . N 6 HOH B 84 2084 2084 HOH HOH . N 6 HOH B 85 2085 2085 HOH HOH . N 6 HOH B 86 2086 2086 HOH HOH . N 6 HOH B 87 2087 2087 HOH HOH . N 6 HOH B 88 2088 2088 HOH HOH . N 6 HOH B 89 2089 2089 HOH HOH . N 6 HOH B 90 2090 2090 HOH HOH . N 6 HOH B 91 2091 2091 HOH HOH . N 6 HOH B 92 2092 2092 HOH HOH . N 6 HOH B 93 2093 2093 HOH HOH . N 6 HOH B 94 2094 2094 HOH HOH . N 6 HOH B 95 2095 2095 HOH HOH . N 6 HOH B 96 2096 2096 HOH HOH . N 6 HOH B 97 2097 2097 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id K _atom_site.label_entity_id 5 _atom_site.Cartn_x 65.293 _atom_site.Cartn_y 51.558 _atom_site.Cartn_z 70.49 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 23.13 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 1030 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 294 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 1 #