data_2XAS
#
_model_server_result.job_id            zJ3DnxXk0P5qP6DWbRfx0A 
_model_server_result.datetime_utc      '2024-11-27 09:32:09' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2xas 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":901}' 
#
_entry.id    2XAS 
#
_exptl.entry_id    2XAS 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              446.495 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '3-[4-({N-[(BENZYLOXY)CARBONYL]-L-PHENYLALANYL}AMINO)PHENYL]PROPANOIC ACID' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            2XAS 
_cell.length_a            118.317 
_cell.length_b            179.693 
_cell.length_c            235.257 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 2XAS 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        23 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'I 2 2 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             D 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_struct_conn.conn_type_id                   covale 
_struct_conn.details                        ? 
_struct_conn.id                             covale1 
_struct_conn.ptnr1_label_asym_id            C 
_struct_conn.ptnr1_label_atom_id            N5 
_struct_conn.ptnr1_label_comp_id            FAD 
_struct_conn.ptnr1_label_seq_id             . 
_struct_conn.ptnr1_auth_asym_id             A 
_struct_conn.ptnr1_auth_comp_id             FAD 
_struct_conn.ptnr1_auth_seq_id              900 
_struct_conn.ptnr1_symmetry                 1_555 
_struct_conn.ptnr2_label_asym_id            D 
_struct_conn.ptnr2_label_atom_id            C1B 
_struct_conn.ptnr2_label_comp_id            M80 
_struct_conn.ptnr2_label_seq_id             . 
_struct_conn.ptnr2_auth_asym_id             A 
_struct_conn.ptnr2_auth_comp_id             M80 
_struct_conn.ptnr2_auth_seq_id              901 
_struct_conn.ptnr2_symmetry                 1_555 
_struct_conn.pdbx_ptnr1_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr1_label_alt_id        ? 
_struct_conn.pdbx_ptnr1_standard_comp_id    ? 
_struct_conn.pdbx_ptnr2_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr2_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr3_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_label_asym_id       ? 
_struct_conn.pdbx_ptnr3_label_atom_id       ? 
_struct_conn.pdbx_ptnr3_label_comp_id       ? 
_struct_conn.pdbx_ptnr3_label_seq_id        ? 
_struct_conn.pdbx_PDB_id                    ? 
_struct_conn.pdbx_dist_value                1.462 
_struct_conn.pdbx_value_order               ? 
#
_chem_comp.formula           'C26 H26 N2 O5' 
_chem_comp.formula_weight    446.495 
_chem_comp.id                M80 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '3-[4-({N-[(BENZYLOXY)CARBONYL]-L-PHENYLALANYL}AMINO)PHENYL]PROPANOIC ACID' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1B O1B M80 doub 307 n n 
C1B C2B M80 sing 308 n n 
C1B OXT M80 sing 309 n n 
C2B C3B M80 sing 310 n n 
C3B CB1 M80 sing 311 n n 
CB1 CB6 M80 sing 312 n y 
CB1 CB2 M80 doub 313 n y 
CB6 CB5 M80 doub 314 n y 
CB5 CB4 M80 sing 315 n y 
CB2 CB3 M80 sing 316 n y 
CB3 CB4 M80 doub 317 n y 
CB4 NB4 M80 sing 318 n n 
NB4 C4B M80 sing 319 n n 
C4B O4B M80 doub 320 n n 
C4B CW M80 sing 321 n n 
CW CW1 M80 sing 322 n n 
CW NW M80 sing 323 n n 
CW1 CW2 M80 sing 324 n n 
CW2 CW3 M80 sing 325 n y 
CW2 CW7 M80 doub 326 n y 
CW3 CW4 M80 doub 327 n y 
CW4 CW5 M80 sing 328 n y 
CW5 CW6 M80 doub 329 n y 
CW6 CW7 M80 sing 330 n y 
NW CY M80 sing 331 n n 
CY OY1 M80 doub 332 n n 
CY OY2 M80 sing 333 n n 
OY2 CZ M80 sing 334 n n 
CZ CZ1 M80 sing 335 n n 
CZ1 CZ2 M80 sing 336 n y 
CZ1 CZ6 M80 doub 337 n y 
CZ2 CZ3 M80 doub 338 n y 
CZ3 CZ4 M80 sing 339 n y 
CZ4 CZ5 M80 doub 340 n y 
CZ5 CZ6 M80 sing 341 n y 
C2B H2B1 M80 sing 342 n n 
C2B H2B2 M80 sing 343 n n 
OXT HXT M80 sing 344 n n 
C3B H3B1 M80 sing 345 n n 
C3B H3B2 M80 sing 346 n n 
CB6 HB6 M80 sing 347 n n 
CB2 HB2 M80 sing 348 n n 
CB5 HB5 M80 sing 349 n n 
CB3 HB3 M80 sing 350 n n 
NB4 HB4 M80 sing 351 n n 
CW HW M80 sing 352 n n 
CW1 HW11 M80 sing 353 n n 
CW1 HW12 M80 sing 354 n n 
NW HA M80 sing 355 n n 
CW3 HW3 M80 sing 356 n n 
CW7 HW7 M80 sing 357 n n 
CW4 HW4 M80 sing 358 n n 
CW5 HW5 M80 sing 359 n n 
CW6 HW6 M80 sing 360 n n 
CZ HZ1C M80 sing 361 n n 
CZ HZ2C M80 sing 362 n n 
CZ2 HZ2 M80 sing 363 n n 
CZ6 HZ6 M80 sing 364 n n 
CZ3 HZ3 M80 sing 365 n n 
CZ4 HZ4 M80 sing 366 n n 
CZ5 HZ5 M80 sing 367 n n 
#
_atom_sites.entry_id                     2XAS 
_atom_sites.fract_transf_matrix[1][1]    0.008452 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.005565 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.004251 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 FAD A 1 900 900 FAD FAD . 
D 4 M80 A 1 901 901 M80 M80 . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1B M80 . . . D 4 -7.888 57.29 81.276 1 66.07 ? C1B M80 901 A 1 
HETATM 2 O O1B M80 . . . D 4 -8.465 57.255 80.184 1 66.51 ? O1B M80 901 A 1 
HETATM 3 C C2B M80 . . . D 4 -6.923 56.204 81.7 1 68.52 ? C2B M80 901 A 1 
HETATM 4 C C3B M80 . . . D 4 -6.048 56.643 82.856 1 73.2 ? C3B M80 901 A 1 
HETATM 5 C CB1 M80 . . . D 4 -6.062 55.531 83.873 1 78.13 ? CB1 M80 901 A 1 
HETATM 6 C CB6 M80 . . . D 4 -7.266 54.923 84.214 1 79.88 ? CB6 M80 901 A 1 
HETATM 7 C CB5 M80 . . . D 4 -7.289 53.888 85.145 1 83.38 ? CB5 M80 901 A 1 
HETATM 8 C CB2 M80 . . . D 4 -4.867 55.095 84.456 1 80.52 ? CB2 M80 901 A 1 
HETATM 9 C CB3 M80 . . . D 4 -4.889 54.058 85.385 1 83.66 ? CB3 M80 901 A 1 
HETATM 10 C CB4 M80 . . . D 4 -6.109 53.449 85.753 1 86.64 ? CB4 M80 901 A 1 
HETATM 11 N NB4 M80 . . . D 4 -6.173 52.365 86.681 1 92.23 ? NB4 M80 901 A 1 
HETATM 12 C C4B M80 . . . D 4 -5.073 51.864 87.278 1 97.96 ? C4B M80 901 A 1 
HETATM 13 O O4B M80 . . . D 4 -3.941 52.334 87.087 1 99.14 ? O4B M80 901 A 1 
HETATM 14 C CW M80 . . . D 4 -5.222 50.676 88.205 1 100.89 ? CW M80 901 A 1 
HETATM 15 C CW1 M80 . . . D 4 -3.802 50.087 88.322 1 102.73 ? CW1 M80 901 A 1 
HETATM 16 C CW2 M80 . . . D 4 -3.615 48.662 88.807 1 103.47 ? CW2 M80 901 A 1 
HETATM 17 C CW3 M80 . . . D 4 -3.162 47.686 87.913 1 104.29 ? CW3 M80 901 A 1 
HETATM 18 C CW4 M80 . . . D 4 -2.964 46.374 88.349 1 104.3 ? CW4 M80 901 A 1 
HETATM 19 C CW5 M80 . . . D 4 -3.195 46.052 89.685 1 103.61 ? CW5 M80 901 A 1 
HETATM 20 C CW6 M80 . . . D 4 -3.627 47.028 90.578 1 103.07 ? CW6 M80 901 A 1 
HETATM 21 C CW7 M80 . . . D 4 -3.837 48.333 90.144 1 103.28 ? CW7 M80 901 A 1 
HETATM 22 N NW M80 . . . D 4 -6.09 49.626 87.671 1 103.74 ? NW M80 901 A 1 
HETATM 23 C CY M80 . . . D 4 -5.908 48.931 86.515 1 106.37 ? CY M80 901 A 1 
HETATM 24 O OY1 M80 . . . D 4 -6.738 48.067 86.213 1 108.29 ? OY1 M80 901 A 1 
HETATM 25 O OY2 M80 . . . D 4 -4.737 49.159 85.61 1 105.96 ? OY2 M80 901 A 1 
HETATM 26 C CZ M80 . . . D 4 -4.688 48.87 84.19 1 104.04 ? CZ M80 901 A 1 
HETATM 27 C CZ1 M80 . . . D 4 -5.323 49.93 83.28 1 102.76 ? CZ1 M80 901 A 1 
HETATM 28 C CZ2 M80 . . . D 4 -6.66 49.794 82.854 1 102.12 ? CZ2 M80 901 A 1 
HETATM 29 C CZ3 M80 . . . D 4 -7.262 50.745 82.019 1 101.06 ? CZ3 M80 901 A 1 
HETATM 30 C CZ4 M80 . . . D 4 -6.509 51.848 81.607 1 101.17 ? CZ4 M80 901 A 1 
HETATM 31 C CZ5 M80 . . . D 4 -5.174 51.994 82.016 1 100.84 ? CZ5 M80 901 A 1 
HETATM 32 C CZ6 M80 . . . D 4 -4.579 51.041 82.848 1 101.39 ? CZ6 M80 901 A 1 
#
_model_server_stats.io_time_ms              56 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    6 
_model_server_stats.query_time_ms           271 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           32 
#