data_2XB7
#
_model_server_result.job_id            5TEDwBdZJ5ht9KGORJwgyA 
_model_server_result.datetime_utc      '2024-10-15 04:34:18' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2xb7 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":1501}' 
#
_entry.id    2XB7 
#
_exptl.entry_id    2XB7 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              614.202 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            "5-CHLORO-N-[2-METHOXY-4-[4-(4-METHYLPIPERAZIN-1-YL)PIPERIDIN-1-YL]PHENYL]-N'-(2-PROPAN-2-YLSULFONYLPHENYL)PYRIMIDINE-2,4-DIAMINE" 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            2XB7 
_cell.length_a            51.781 
_cell.length_b            57.307 
_cell.length_c            105.157 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 2XB7 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C30 H40 Cl N7 O3 S' 
_chem_comp.formula_weight    614.202 
_chem_comp.id                GUI 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              "5-CHLORO-N-[2-METHOXY-4-[4-(4-METHYLPIPERAZIN-1-YL)PIPERIDIN-1-YL]PHENYL]-N'-(2-PROPAN-2-YLSULFONYLPHENYL)PYRIMIDINE-2,4-DIAMINE" 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     4-[1-(4-{[5-CHLORO-4-({2-[(1-METHYLETHYL)SULFONYL]PHENYL}AMINO)PYRIMIDIN-2-YL]AMINO}-3-METHOXYPHENYL)PIPERIDIN-4-YL]-1-METHYLPIPERAZIN-1-IUM 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 GUI sing 129 n y 
C1 C6 GUI doub 130 n y 
C1 CL GUI sing 131 n n 
C2 N3 GUI doub 132 n y 
C2 N29 GUI sing 133 n n 
N3 C4 GUI sing 134 n y 
C4 N5 GUI doub 135 n y 
C4 N7 GUI sing 136 n n 
N5 C6 GUI sing 137 n y 
N7 C8 GUI sing 138 n n 
C8 C9 GUI sing 139 n y 
C8 C13 GUI doub 140 n y 
C9 C10 GUI doub 141 n y 
C10 C11 GUI sing 142 n y 
C11 C12 GUI doub 143 n y 
C11 N16 GUI sing 144 n n 
C12 C13 GUI sing 145 n y 
C13 O14 GUI sing 146 n n 
O14 C15 GUI sing 147 n n 
N16 C17 GUI sing 148 n n 
N16 C21 GUI sing 149 n n 
C17 C18 GUI sing 150 n n 
C18 C19 GUI sing 151 n n 
C19 C20 GUI sing 152 n n 
C19 N22 GUI sing 153 n n 
C20 C21 GUI sing 154 n n 
N22 C23 GUI sing 155 n n 
N22 C27 GUI sing 156 n n 
C23 C24 GUI sing 157 n n 
C24 N25 GUI sing 158 n n 
N25 C26 GUI sing 159 n n 
N25 C28 GUI sing 160 n n 
C26 C27 GUI sing 161 n n 
N29 C30 GUI sing 162 n n 
C30 C31 GUI sing 163 n y 
C30 C35 GUI doub 164 n y 
C31 C32 GUI doub 165 n y 
C31 S36 GUI sing 166 n n 
C32 C33 GUI sing 167 n y 
C33 C34 GUI doub 168 n y 
C34 C35 GUI sing 169 n y 
S36 C37 GUI sing 170 n n 
S36 O40 GUI doub 171 n n 
S36 O41 GUI doub 172 n n 
C37 C38 GUI sing 173 n n 
C37 C39 GUI sing 174 n n 
C6 H6 GUI sing 175 n n 
N29 H29 GUI sing 176 n n 
N7 H7 GUI sing 177 n n 
C9 H9 GUI sing 178 n n 
C10 H10 GUI sing 179 n n 
C12 H12 GUI sing 180 n n 
C15 H151 GUI sing 181 n n 
C15 H152 GUI sing 182 n n 
C15 H153 GUI sing 183 n n 
C17 H171 GUI sing 184 n n 
C17 H172 GUI sing 185 n n 
C21 H211 GUI sing 186 n n 
C21 H212 GUI sing 187 n n 
C18 H181 GUI sing 188 n n 
C18 H182 GUI sing 189 n n 
C19 H19 GUI sing 190 n n 
C20 H201 GUI sing 191 n n 
C20 H202 GUI sing 192 n n 
C23 H231 GUI sing 193 n n 
C23 H232 GUI sing 194 n n 
C27 H271 GUI sing 195 n n 
C27 H272 GUI sing 196 n n 
C24 H241 GUI sing 197 n n 
C24 H242 GUI sing 198 n n 
C26 H261 GUI sing 199 n n 
C26 H262 GUI sing 200 n n 
C28 H281 GUI sing 201 n n 
C28 H282 GUI sing 202 n n 
C28 H283 GUI sing 203 n n 
C35 H35 GUI sing 204 n n 
C32 H32 GUI sing 205 n n 
C33 H33 GUI sing 206 n n 
C34 H34 GUI sing 207 n n 
C37 H37 GUI sing 208 n n 
C38 H381 GUI sing 209 n n 
C38 H382 GUI sing 210 n n 
C38 H383 GUI sing 211 n n 
C39 H391 GUI sing 212 n n 
C39 H392 GUI sing 213 n n 
C39 H393 GUI sing 214 n n 
#
_atom_sites.entry_id                     2XB7 
_atom_sites.fract_transf_matrix[1][1]    0.019312 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.01745 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.00951 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 GUI A 1 1501 1501 GUI GUI . 
C 3 HOH A 1 2001 2001 HOH HOH . 
C 3 HOH A 2 2002 2002 HOH HOH . 
C 3 HOH A 3 2003 2003 HOH HOH . 
C 3 HOH A 4 2004 2004 HOH HOH . 
C 3 HOH A 5 2005 2005 HOH HOH . 
C 3 HOH A 6 2006 2006 HOH HOH . 
C 3 HOH A 7 2007 2007 HOH HOH . 
C 3 HOH A 8 2008 2008 HOH HOH . 
C 3 HOH A 9 2009 2009 HOH HOH . 
C 3 HOH A 10 2010 2010 HOH HOH . 
C 3 HOH A 11 2011 2011 HOH HOH . 
C 3 HOH A 12 2012 2012 HOH HOH . 
C 3 HOH A 13 2013 2013 HOH HOH . 
C 3 HOH A 14 2014 2014 HOH HOH . 
C 3 HOH A 15 2015 2015 HOH HOH . 
C 3 HOH A 16 2016 2016 HOH HOH . 
C 3 HOH A 17 2017 2017 HOH HOH . 
C 3 HOH A 18 2018 2018 HOH HOH . 
C 3 HOH A 19 2019 2019 HOH HOH . 
C 3 HOH A 20 2020 2020 HOH HOH . 
C 3 HOH A 21 2021 2021 HOH HOH . 
C 3 HOH A 22 2022 2022 HOH HOH . 
C 3 HOH A 23 2023 2023 HOH HOH . 
C 3 HOH A 24 2024 2024 HOH HOH . 
C 3 HOH A 25 2025 2025 HOH HOH . 
C 3 HOH A 26 2026 2026 HOH HOH . 
C 3 HOH A 27 2027 2027 HOH HOH . 
C 3 HOH A 28 2028 2028 HOH HOH . 
C 3 HOH A 29 2029 2029 HOH HOH . 
C 3 HOH A 30 2030 2030 HOH HOH . 
C 3 HOH A 31 2031 2031 HOH HOH . 
C 3 HOH A 32 2032 2032 HOH HOH . 
C 3 HOH A 33 2033 2033 HOH HOH . 
C 3 HOH A 34 2034 2034 HOH HOH . 
C 3 HOH A 35 2035 2035 HOH HOH . 
C 3 HOH A 36 2036 2036 HOH HOH . 
C 3 HOH A 37 2037 2037 HOH HOH . 
C 3 HOH A 38 2038 2038 HOH HOH . 
C 3 HOH A 39 2039 2039 HOH HOH . 
C 3 HOH A 40 2040 2040 HOH HOH . 
C 3 HOH A 41 2041 2041 HOH HOH . 
C 3 HOH A 42 2042 2042 HOH HOH . 
C 3 HOH A 43 2043 2043 HOH HOH . 
C 3 HOH A 44 2044 2044 HOH HOH . 
C 3 HOH A 45 2045 2045 HOH HOH . 
C 3 HOH A 46 2046 2046 HOH HOH . 
C 3 HOH A 47 2047 2047 HOH HOH . 
C 3 HOH A 48 2048 2048 HOH HOH . 
C 3 HOH A 49 2049 2049 HOH HOH . 
C 3 HOH A 50 2050 2050 HOH HOH . 
C 3 HOH A 51 2051 2051 HOH HOH . 
C 3 HOH A 52 2052 2052 HOH HOH . 
C 3 HOH A 53 2053 2053 HOH HOH . 
C 3 HOH A 54 2054 2054 HOH HOH . 
C 3 HOH A 55 2055 2055 HOH HOH . 
C 3 HOH A 56 2056 2056 HOH HOH . 
C 3 HOH A 57 2057 2057 HOH HOH . 
C 3 HOH A 58 2058 2058 HOH HOH . 
C 3 HOH A 59 2059 2059 HOH HOH . 
C 3 HOH A 60 2060 2060 HOH HOH . 
C 3 HOH A 61 2061 2061 HOH HOH . 
C 3 HOH A 62 2062 2062 HOH HOH . 
C 3 HOH A 63 2063 2063 HOH HOH . 
C 3 HOH A 64 2064 2064 HOH HOH . 
C 3 HOH A 65 2065 2065 HOH HOH . 
C 3 HOH A 66 2066 2066 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GUI . . . B 2 4.287 15.446 10.029 1 31.85 ? C1 GUI 1501 A 1 
HETATM 2 C C2 GUI . . . B 2 4.72 16.337 9.093 1 32.95 ? C2 GUI 1501 A 1 
HETATM 3 N N3 GUI . . . B 2 3.899 17.443 8.781 1 32.43 ? N3 GUI 1501 A 1 
HETATM 4 C C4 GUI . . . B 2 2.773 17.635 9.343 1 34.56 ? C4 GUI 1501 A 1 
HETATM 5 N N5 GUI . . . B 2 2.32 16.718 10.313 1 35.32 ? N5 GUI 1501 A 1 
HETATM 6 C C6 GUI . . . B 2 3.011 15.687 10.65 1 32.59 ? C6 GUI 1501 A 1 
HETATM 7 N N7 GUI . . . B 2 2.002 18.766 8.982 1 35.82 ? N7 GUI 1501 A 1 
HETATM 8 C C8 GUI . . . B 2 2.296 19.907 8.164 1 36.21 ? C8 GUI 1501 A 1 
HETATM 9 C C9 GUI . . . B 2 3.585 20.286 8.012 1 38.33 ? C9 GUI 1501 A 1 
HETATM 10 C C10 GUI . . . B 2 3.949 21.455 7.189 1 42.53 ? C10 GUI 1501 A 1 
HETATM 11 C C11 GUI . . . B 2 2.989 22.184 6.563 1 45.19 ? C11 GUI 1501 A 1 
HETATM 12 C C12 GUI . . . B 2 1.56 21.771 6.727 1 41.42 ? C12 GUI 1501 A 1 
HETATM 13 C C13 GUI . . . B 2 1.216 20.69 7.482 1 36.78 ? C13 GUI 1501 A 1 
HETATM 14 O O14 GUI . . . B 2 -0.132 20.27 7.658 1 36.04 ? O14 GUI 1501 A 1 
HETATM 15 C C15 GUI . . . B 2 -1.155 21.059 7.033 1 33.94 ? C15 GUI 1501 A 1 
HETATM 16 N N16 GUI . . . B 2 3.34 23.329 5.768 1 51 ? N16 GUI 1501 A 1 
HETATM 17 C C17 GUI . . . B 2 4.773 23.56 5.42 1 54.43 ? C17 GUI 1501 A 1 
HETATM 18 C C18 GUI . . . B 2 5.122 25.051 5.192 1 57.24 ? C18 GUI 1501 A 1 
HETATM 19 C C19 GUI . . . B 2 4.077 25.684 4.229 1 59.84 ? C19 GUI 1501 A 1 
HETATM 20 C C20 GUI . . . B 2 2.74 25.71 5.019 1 57.01 ? C20 GUI 1501 A 1 
HETATM 21 C C21 GUI . . . B 2 2.261 24.262 5.323 1 54.46 ? C21 GUI 1501 A 1 
HETATM 22 N N22 GUI . . . B 2 4.48 27.09 3.837 1 63.75 ? N22 GUI 1501 A 1 
HETATM 23 C C23 GUI . . . B 2 3.602 27.601 2.724 1 64.68 ? C23 GUI 1501 A 1 
HETATM 24 C C24 GUI . . . B 2 3.968 29.081 2.406 1 65.73 ? C24 GUI 1501 A 1 
HETATM 25 N N25 GUI . . . B 2 5.425 29.202 2.074 1 67.2 ? N25 GUI 1501 A 1 
HETATM 26 C C26 GUI . . . B 2 6.311 28.617 3.128 1 66.55 ? C26 GUI 1501 A 1 
HETATM 27 C C27 GUI . . . B 2 5.917 27.139 3.388 1 65.03 ? C27 GUI 1501 A 1 
HETATM 28 C C28 GUI . . . B 2 5.768 30.627 1.908 1 67.99 ? C28 GUI 1501 A 1 
HETATM 29 N N29 GUI . . . B 2 5.989 16.134 8.452 1 33.01 ? N29 GUI 1501 A 1 
HETATM 30 C C30 GUI . . . B 2 6.563 16.886 7.378 1 32.94 ? C30 GUI 1501 A 1 
HETATM 31 C C31 GUI . . . B 2 7.917 16.833 7.204 1 35.57 ? C31 GUI 1501 A 1 
HETATM 32 C C32 GUI . . . B 2 8.552 17.605 6.093 1 35.5 ? C32 GUI 1501 A 1 
HETATM 33 C C33 GUI . . . B 2 7.79 18.361 5.257 1 34.1 ? C33 GUI 1501 A 1 
HETATM 34 C C34 GUI . . . B 2 6.323 18.421 5.445 1 33.37 ? C34 GUI 1501 A 1 
HETATM 35 C C35 GUI . . . B 2 5.746 17.721 6.448 1 32.33 ? C35 GUI 1501 A 1 
HETATM 36 S S36 GUI . . . B 2 8.933 15.854 8.306 1 37.81 ? S36 GUI 1501 A 1 
HETATM 37 C C37 GUI . . . B 2 9.731 16.932 9.525 1 37.64 ? C37 GUI 1501 A 1 
HETATM 38 C C38 GUI . . . B 2 8.709 17.903 10.148 1 38.01 ? C38 GUI 1501 A 1 
HETATM 39 C C39 GUI . . . B 2 10.846 17.738 8.833 1 38.59 ? C39 GUI 1501 A 1 
HETATM 40 O O40 GUI . . . B 2 10.046 15.168 7.531 1 38.75 ? O40 GUI 1501 A 1 
HETATM 41 O O41 GUI . . . B 2 8.112 14.822 9.049 1 39.34 ? O41 GUI 1501 A 1 
HETATM 42 CL CL GUI . . . B 2 5.204 14.061 10.486 1 31.91 ? CL GUI 1501 A 1 
#
_model_server_stats.io_time_ms              66 
_model_server_stats.parse_time_ms           13 
_model_server_stats.create_model_time_ms    6 
_model_server_stats.query_time_ms           494 
_model_server_stats.encode_time_ms          7 
_model_server_stats.element_count           42 
#