data_2XIK # _model_server_result.job_id 60TZZSzyQMbkKU4LmELvIg _model_server_result.datetime_utc '2024-11-28 14:59:48' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2xik # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":1294}' # _entry.id 2XIK # _exptl.entry_id 2XIK _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 414.928 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 5-[(E)-(5-CHLORO-2-OXO-1,2-DIHYDRO-3H-INDOL-3-YLIDENE)METHYL]-N-[2-(DIETHYLAMINO)ETHYL]-2,4-DIMETHYL-1H-PYRROLE-3-CARBOXAMIDE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 113.78 _cell.angle_gamma 90 _cell.entry_id 2XIK _cell.length_a 57.08 _cell.length_b 48.56 _cell.length_c 67.57 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2XIK _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C ASN 174 A ASN 173 1_555 A N TPO 175 A TPO 174 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.341 ? covale ? covale2 A C TPO 175 A TPO 174 1_555 A N PHE 176 A PHE 175 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.346 ? # _chem_comp.formula 'C22 H27 Cl N4 O2' _chem_comp.formula_weight 414.928 _chem_comp.id J60 _chem_comp.mon_nstd_flag . _chem_comp.name 5-[(E)-(5-CHLORO-2-OXO-1,2-DIHYDRO-3H-INDOL-3-YLIDENE)METHYL]-N-[2-(DIETHYLAMINO)ETHYL]-2,4-DIMETHYL-1H-PYRROLE-3-CARBOXAMIDE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CBA CAZ J60 sing 182 n n CAZ NAX J60 sing 183 n n NAX CAY J60 sing 184 n n CAY CBB J60 sing 185 n n NAX CAW J60 sing 186 n n CAW CAV J60 sing 187 n n CAV NAU J60 sing 188 n n NAU CAS J60 sing 189 n n CAS OAT J60 doub 190 n n CAS CAN J60 sing 191 n n CAN CAM J60 sing 192 n y CAM CAQ J60 sing 193 n n CAN CAO J60 doub 194 n y CAO CAR J60 sing 195 n n CAO NAP J60 sing 196 n y CAM CAL J60 doub 197 n y NAP CAL J60 sing 198 n y CAL CAK J60 sing 199 n n CAK CAG J60 doub 200 z n CAG CAE J60 sing 201 n n CAE CAD J60 sing 202 n y CAD CAA J60 doub 203 n y CAA CL J60 sing 204 n n CAA CAB J60 sing 205 n y CAB CAC J60 doub 206 n y CAE CAF J60 doub 207 n y CAC CAF J60 sing 208 n y CAF NAH J60 sing 209 n n CAG CAI J60 sing 210 n n NAH CAI J60 sing 211 n n CAI OAJ J60 doub 212 n n CBA HBA1 J60 sing 213 n n CBA HBA2 J60 sing 214 n n CBA HBA3 J60 sing 215 n n CAZ HAZ1 J60 sing 216 n n CAZ HAZ2 J60 sing 217 n n CAY HAY1 J60 sing 218 n n CAY HAY2 J60 sing 219 n n CAW HAW1 J60 sing 220 n n CAW HAW2 J60 sing 221 n n CBB HBB1 J60 sing 222 n n CBB HBB2 J60 sing 223 n n CBB HBB3 J60 sing 224 n n CAV HAV1 J60 sing 225 n n CAV HAV2 J60 sing 226 n n NAU HAU J60 sing 227 n n CAQ HAQ1 J60 sing 228 n n CAQ HAQ2 J60 sing 229 n n CAQ HAQ3 J60 sing 230 n n CAR HAR1 J60 sing 231 n n CAR HAR2 J60 sing 232 n n CAR HAR3 J60 sing 233 n n NAP HAP J60 sing 234 n n CAK HAK J60 sing 235 n n CAD HAD J60 sing 236 n n CAB HAB J60 sing 237 n n CAC HAC J60 sing 238 n n NAH HAH J60 sing 239 n n # _atom_sites.entry_id 2XIK _atom_sites.fract_transf_matrix[1][1] 0.017519 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.00772 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.020593 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016173 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 EDO A 1 1293 1293 EDO EDO . C 3 J60 A 1 1294 1294 J60 J60 . D 4 HOH A 1 2001 2001 HOH HOH . D 4 HOH A 2 2002 2002 HOH HOH . D 4 HOH A 3 2003 2003 HOH HOH . D 4 HOH A 4 2004 2004 HOH HOH . D 4 HOH A 5 2005 2005 HOH HOH . D 4 HOH A 6 2006 2006 HOH HOH . D 4 HOH A 7 2007 2007 HOH HOH . D 4 HOH A 8 2008 2008 HOH HOH . D 4 HOH A 9 2009 2009 HOH HOH . D 4 HOH A 10 2010 2010 HOH HOH . D 4 HOH A 11 2011 2011 HOH HOH . D 4 HOH A 12 2012 2012 HOH HOH . D 4 HOH A 13 2013 2013 HOH HOH . D 4 HOH A 14 2014 2014 HOH HOH . D 4 HOH A 15 2015 2015 HOH HOH . D 4 HOH A 16 2016 2016 HOH HOH . D 4 HOH A 17 2017 2017 HOH HOH . D 4 HOH A 18 2018 2018 HOH HOH . D 4 HOH A 19 2019 2019 HOH HOH . D 4 HOH A 20 2020 2020 HOH HOH . D 4 HOH A 21 2021 2021 HOH HOH . D 4 HOH A 22 2022 2022 HOH HOH . D 4 HOH A 23 2023 2023 HOH HOH . D 4 HOH A 24 2024 2024 HOH HOH . D 4 HOH A 25 2025 2025 HOH HOH . D 4 HOH A 26 2026 2026 HOH HOH . D 4 HOH A 27 2027 2027 HOH HOH . D 4 HOH A 28 2028 2028 HOH HOH . D 4 HOH A 29 2029 2029 HOH HOH . D 4 HOH A 30 2030 2030 HOH HOH . D 4 HOH A 31 2031 2031 HOH HOH . D 4 HOH A 32 2032 2032 HOH HOH . D 4 HOH A 33 2033 2033 HOH HOH . D 4 HOH A 34 2034 2034 HOH HOH . D 4 HOH A 35 2035 2035 HOH HOH . D 4 HOH A 36 2036 2036 HOH HOH . D 4 HOH A 37 2037 2037 HOH HOH . D 4 HOH A 38 2038 2038 HOH HOH . D 4 HOH A 39 2039 2039 HOH HOH . D 4 HOH A 40 2040 2040 HOH HOH . D 4 HOH A 41 2041 2041 HOH HOH . D 4 HOH A 42 2042 2042 HOH HOH . D 4 HOH A 43 2043 2043 HOH HOH . D 4 HOH A 44 2044 2044 HOH HOH . D 4 HOH A 45 2045 2045 HOH HOH . D 4 HOH A 46 2046 2046 HOH HOH . D 4 HOH A 47 2047 2047 HOH HOH . D 4 HOH A 48 2048 2048 HOH HOH . D 4 HOH A 49 2049 2049 HOH HOH . D 4 HOH A 50 2050 2050 HOH HOH . D 4 HOH A 51 2051 2051 HOH HOH . D 4 HOH A 52 2052 2052 HOH HOH . D 4 HOH A 53 2053 2053 HOH HOH . D 4 HOH A 54 2054 2054 HOH HOH . D 4 HOH A 55 2055 2055 HOH HOH . D 4 HOH A 56 2056 2056 HOH HOH . D 4 HOH A 57 2057 2057 HOH HOH . D 4 HOH A 58 2058 2058 HOH HOH . D 4 HOH A 59 2059 2059 HOH HOH . D 4 HOH A 60 2060 2060 HOH HOH . D 4 HOH A 61 2061 2061 HOH HOH . D 4 HOH A 62 2062 2062 HOH HOH . D 4 HOH A 63 2063 2063 HOH HOH . D 4 HOH A 64 2064 2064 HOH HOH . D 4 HOH A 65 2065 2065 HOH HOH . D 4 HOH A 66 2066 2066 HOH HOH . D 4 HOH A 67 2067 2067 HOH HOH . D 4 HOH A 68 2068 2068 HOH HOH . D 4 HOH A 69 2069 2069 HOH HOH . D 4 HOH A 70 2070 2070 HOH HOH . D 4 HOH A 71 2071 2071 HOH HOH . D 4 HOH A 72 2072 2072 HOH HOH . D 4 HOH A 73 2073 2073 HOH HOH . D 4 HOH A 74 2074 2074 HOH HOH . D 4 HOH A 75 2075 2075 HOH HOH . D 4 HOH A 76 2076 2076 HOH HOH . D 4 HOH A 77 2077 2077 HOH HOH . D 4 HOH A 78 2078 2078 HOH HOH . D 4 HOH A 79 2079 2079 HOH HOH . D 4 HOH A 80 2080 2080 HOH HOH . D 4 HOH A 81 2081 2081 HOH HOH . D 4 HOH A 82 2082 2082 HOH HOH . D 4 HOH A 83 2083 2083 HOH HOH . D 4 HOH A 84 2084 2084 HOH HOH . D 4 HOH A 85 2085 2085 HOH HOH . D 4 HOH A 86 2086 2086 HOH HOH . D 4 HOH A 87 2087 2087 HOH HOH . D 4 HOH A 88 2088 2088 HOH HOH . D 4 HOH A 89 2089 2089 HOH HOH . D 4 HOH A 90 2090 2090 HOH HOH . D 4 HOH A 91 2091 2091 HOH HOH . D 4 HOH A 92 2092 2092 HOH HOH . D 4 HOH A 93 2093 2093 HOH HOH . D 4 HOH A 94 2094 2094 HOH HOH . D 4 HOH A 95 2095 2095 HOH HOH . D 4 HOH A 96 2096 2096 HOH HOH . D 4 HOH A 97 2097 2097 HOH HOH . D 4 HOH A 98 2098 2098 HOH HOH . D 4 HOH A 99 2099 2099 HOH HOH . D 4 HOH A 100 2100 2100 HOH HOH . D 4 HOH A 101 2101 2101 HOH HOH . D 4 HOH A 102 2102 2102 HOH HOH . D 4 HOH A 103 2103 2103 HOH HOH . D 4 HOH A 104 2104 2104 HOH HOH . D 4 HOH A 105 2105 2105 HOH HOH . D 4 HOH A 106 2106 2106 HOH HOH . D 4 HOH A 107 2107 2107 HOH HOH . D 4 HOH A 108 2108 2108 HOH HOH . D 4 HOH A 109 2109 2109 HOH HOH . D 4 HOH A 110 2110 2110 HOH HOH . D 4 HOH A 111 2111 2111 HOH HOH . D 4 HOH A 112 2112 2112 HOH HOH . D 4 HOH A 113 2113 2113 HOH HOH . D 4 HOH A 114 2114 2114 HOH HOH . D 4 HOH A 115 2115 2115 HOH HOH . D 4 HOH A 116 2116 2116 HOH HOH . D 4 HOH A 117 2117 2117 HOH HOH . D 4 HOH A 118 2118 2118 HOH HOH . D 4 HOH A 119 2119 2119 HOH HOH . D 4 HOH A 120 2120 2120 HOH HOH . D 4 HOH A 121 2121 2121 HOH HOH . D 4 HOH A 122 2122 2122 HOH HOH . D 4 HOH A 123 2123 2123 HOH HOH . D 4 HOH A 124 2124 2124 HOH HOH . D 4 HOH A 125 2125 2125 HOH HOH . D 4 HOH A 126 2126 2126 HOH HOH . D 4 HOH A 127 2127 2127 HOH HOH . D 4 HOH A 128 2128 2128 HOH HOH . D 4 HOH A 129 2129 2129 HOH HOH . D 4 HOH A 130 2130 2130 HOH HOH . D 4 HOH A 131 2131 2131 HOH HOH . D 4 HOH A 132 2132 2132 HOH HOH . D 4 HOH A 133 2133 2133 HOH HOH . D 4 HOH A 134 2134 2134 HOH HOH . D 4 HOH A 135 2135 2135 HOH HOH . D 4 HOH A 136 2136 2136 HOH HOH . D 4 HOH A 137 2137 2137 HOH HOH . D 4 HOH A 138 2138 2138 HOH HOH . D 4 HOH A 139 2139 2139 HOH HOH . D 4 HOH A 140 2140 2140 HOH HOH . D 4 HOH A 141 2141 2141 HOH HOH . D 4 HOH A 142 2142 2142 HOH HOH . D 4 HOH A 143 2143 2143 HOH HOH . D 4 HOH A 144 2144 2144 HOH HOH . D 4 HOH A 145 2145 2145 HOH HOH . D 4 HOH A 146 2146 2146 HOH HOH . D 4 HOH A 147 2147 2147 HOH HOH . D 4 HOH A 148 2148 2148 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CBA J60 . . . C 3 -3.337 -1.12 -22.329 0.5 30.46 ? CBA J60 1294 A 1 HETATM 2 C CAZ J60 . . . C 3 -3.964 -2.515 -22.264 0.5 81.7 ? CAZ J60 1294 A 1 HETATM 3 N NAX J60 . . . C 3 -2.895 -3.525 -22.229 0.5 61.91 ? NAX J60 1294 A 1 HETATM 4 C CAY J60 . . . C 3 -2.548 -3.883 -20.847 0.5 38.48 ? CAY J60 1294 A 1 HETATM 5 C CBB J60 . . . C 3 -1.381 -3.007 -20.385 0.5 33.4 ? CBB J60 1294 A 1 HETATM 6 C CAW J60 . . . C 3 -3.159 -4.715 -23.061 1 63.04 ? CAW J60 1294 A 1 HETATM 7 C CAV J60 . . . C 3 -4.598 -5.243 -22.92 1 60.88 ? CAV J60 1294 A 1 HETATM 8 N NAU J60 . . . C 3 -4.584 -6.658 -22.485 1 44.38 ? NAU J60 1294 A 1 HETATM 9 C CAS J60 . . . C 3 -4.123 -7.657 -23.248 1 67.33 ? CAS J60 1294 A 1 HETATM 10 O OAT J60 . . . C 3 -3.653 -7.491 -24.374 1 52.18 ? OAT J60 1294 A 1 HETATM 11 C CAN J60 . . . C 3 -4.15 -9.074 -22.638 1 106.43 ? CAN J60 1294 A 1 HETATM 12 C CAM J60 . . . C 3 -4.3 -9.462 -21.312 1 36.21 ? CAM J60 1294 A 1 HETATM 13 C CAQ J60 . . . C 3 -4.591 -8.542 -20.111 1 58.16 ? CAQ J60 1294 A 1 HETATM 14 C CAO J60 . . . C 3 -3.887 -10.242 -23.338 1 73.06 ? CAO J60 1294 A 1 HETATM 15 C CAR J60 . . . C 3 -3.644 -10.354 -24.847 1 38.47 ? CAR J60 1294 A 1 HETATM 16 N NAP J60 . . . C 3 -3.921 -11.282 -22.503 1 87.93 ? NAP J60 1294 A 1 HETATM 17 C CAL J60 . . . C 3 -4.168 -10.857 -21.258 1 44.04 ? CAL J60 1294 A 1 HETATM 18 C CAK J60 . . . C 3 -4.259 -11.525 -20.031 1 63.3 ? CAK J60 1294 A 1 HETATM 19 C CAG J60 . . . C 3 -4.219 -12.912 -19.82 1 43.31 ? CAG J60 1294 A 1 HETATM 20 C CAE J60 . . . C 3 -4.367 -13.5 -18.565 1 32.58 ? CAE J60 1294 A 1 HETATM 21 C CAD J60 . . . C 3 -4.494 -12.993 -17.263 1 45.58 ? CAD J60 1294 A 1 HETATM 22 C CAA J60 . . . C 3 -4.613 -13.876 -16.177 1 36.44 ? CAA J60 1294 A 1 HETATM 23 CL CL J60 . . . C 3 -4.761 -13.288 -14.548 1 59.41 ? CL J60 1294 A 1 HETATM 24 C CAB J60 . . . C 3 -4.629 -15.251 -16.406 1 27.06 ? CAB J60 1294 A 1 HETATM 25 C CAC J60 . . . C 3 -4.535 -15.751 -17.705 1 28.93 ? CAC J60 1294 A 1 HETATM 26 C CAF J60 . . . C 3 -4.405 -14.883 -18.787 1 51.95 ? CAF J60 1294 A 1 HETATM 27 N NAH J60 . . . C 3 -4.314 -15.12 -20.099 1 37 ? NAH J60 1294 A 1 HETATM 28 C CAI J60 . . . C 3 -4.191 -13.958 -20.745 1 38.64 ? CAI J60 1294 A 1 HETATM 29 O OAJ J60 . . . C 3 -4.002 -13.883 -21.958 1 38.97 ? OAJ J60 1294 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 19 _model_server_stats.query_time_ms 311 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 29 #