data_2XJA
#
_model_server_result.job_id            QzOmtIS0CHE4FOpbrekfmw 
_model_server_result.datetime_utc      '2024-11-24 19:54:07' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2xja 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":1534}' 
#
_entry.id    2XJA 
#
_exptl.entry_id    2XJA 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              24.305 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'MAGNESIUM ION' 
_entity.pdbx_number_of_molecules    10 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         111.32 
_cell.angle_beta          91.42 
_cell.angle_gamma         92.9 
_cell.entry_id            2XJA 
_cell.length_a            75.04 
_cell.length_b            76.32 
_cell.length_c            81.99 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 2XJA 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA monomeric 1 author_and_software_defined_assembly 1 
PISA monomeric 1 author_and_software_defined_assembly 2 
PISA monomeric 1 author_and_software_defined_assembly 3 
PISA monomeric 1 author_and_software_defined_assembly 4 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,E,F,G,H,W 1 1 
B,I,J,K,L,M,X 2 1 
C,N,O,P,Q,Y 3 1 
D,R,S,T,U,V,Z 4 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 F N N 
? 3 G N N 
? 3 I N N 
? 3 K N N 
? 3 M N N 
? 3 O N N 
? 3 Q N N 
? 3 R N N 
? 3 T N N 
? 3 V N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A C ALA 261 A ALA 261 1_555 A N KCX 262 A KCX 262 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.337 ? 
covale ? covale2 A C KCX 262 A KCX 262 1_555 A N ALA 263 A ALA 263 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? 
covale ? covale3 B C ALA 261 B ALA 261 1_555 B N KCX 262 B KCX 262 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? 
covale ? covale4 B C KCX 262 B KCX 262 1_555 B N ALA 263 B ALA 263 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.319 ? 
covale ? covale5 C C ALA 261 C ALA 261 1_555 C N KCX 262 C KCX 262 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? 
covale ? covale6 C C KCX 262 C KCX 262 1_555 C N ALA 263 C ALA 263 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? 
covale ? covale7 D C ALA 261 D ALA 261 1_555 D N KCX 262 D KCX 262 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? 
covale ? covale8 D C KCX 262 D KCX 262 1_555 D N ALA 263 D ALA 263 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? 
metalc ? metalc1 A OG1 THR 158 A THR 158 1_555 F MG MG . A MG 1534 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.082 ? 
metalc ? metalc2 A OG1 THR 180 A THR 180 1_555 F MG MG . A MG 1534 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.073 ? 
metalc ? metalc3 A OE1 GLU 220 A GLU 220 1_555 F MG MG . A MG 1534 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.917 ? 
metalc ? metalc4 A NE2 HIS 248 A HIS 248 1_555 G MG MG . A MG 1535 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.085 ? 
metalc ? metalc5 E O3B ADP . A ADP 1533 1_555 F MG MG . A MG 1534 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.922 ? 
metalc ? metalc6 F MG MG . A MG 1534 1_555 W O HOH . A HOH 2001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.947 ? 
metalc ? metalc7 G MG MG . A MG 1535 1_555 H O21 UAG . A UAG 1536 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.232 ? 
metalc ? metalc8 B O GLY 140 B GLY 140 1_555 I MG MG . B MG 1533 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.165 ? 
metalc ? metalc9 B OG1 THR 158 B THR 158 1_555 K MG MG . B MG 1535 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.644 ? 
metalc ? metalc10 B OG1 THR 180 B THR 180 1_555 K MG MG . B MG 1535 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.108 ? 
metalc ? metalc11 B OE1 GLU 220 B GLU 220 1_555 K MG MG . B MG 1535 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.599 ? 
metalc ? metalc12 B NE2 HIS 248 B HIS 248 1_555 M MG MG . B MG 1537 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.064 ? 
metalc ? metalc13 I MG MG . B MG 1533 1_555 D OD1 ASP 215 D ASP 215 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.88 ? 
metalc ? metalc14 J O1B ADP . B ADP 1534 1_555 K MG MG . B MG 1535 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.467 ? 
metalc ? metalc15 J O3B ADP . B ADP 1534 1_555 K MG MG . B MG 1535 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.921 ? 
metalc ? metalc16 J PB ADP . B ADP 1534 1_555 K MG MG . B MG 1535 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.491 ? 
metalc ? metalc17 K MG MG . B MG 1535 1_555 X O HOH . B HOH 2001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.413 ? 
metalc ? metalc18 L O21 UAG . B UAG 1536 1_555 M MG MG . B MG 1537 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.233 ? 
metalc ? metalc19 C OG1 THR 158 C THR 158 1_555 O MG MG . C MG 1534 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.842 ? 
metalc ? metalc20 C OG1 THR 180 C THR 180 1_555 O MG MG . C MG 1534 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.068 ? 
metalc ? metalc21 C OE1 GLU 220 C GLU 220 1_555 O MG MG . C MG 1534 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.485 ? 
metalc ? metalc22 C NE2 HIS 248 C HIS 248 1_555 Q MG MG . C MG 1536 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.076 ? 
metalc ? metalc23 N O3B ADP . C ADP 1533 1_555 O MG MG . C MG 1534 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.929 ? 
metalc ? metalc24 O MG MG . C MG 1534 1_555 Y O HOH . C HOH 2001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.505 ? 
metalc ? metalc25 P O21 UAG . C UAG 1535 1_555 Q MG MG . C MG 1536 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.26 ? 
metalc ? metalc26 D OG1 THR 158 D THR 158 1_555 T MG MG . D MG 1535 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.686 ? 
metalc ? metalc27 D OG1 THR 180 D THR 180 1_555 T MG MG . D MG 1535 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.141 ? 
metalc ? metalc28 D OE1 GLU 220 D GLU 220 1_555 T MG MG . D MG 1535 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.934 ? 
metalc ? metalc29 D NE2 HIS 248 D HIS 248 1_555 V MG MG . D MG 1537 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? 
metalc ? metalc30 D OD1 ASP 448 D ASP 448 1_555 R MG MG . D MG 1533 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.771 ? 
metalc ? metalc31 D O GLY 502 D GLY 502 1_555 R MG MG . D MG 1533 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.158 ? 
metalc ? metalc32 S O3B ADP . D ADP 1534 1_555 T MG MG . D MG 1535 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.881 ? 
metalc ? metalc33 S PB ADP . D ADP 1534 1_555 T MG MG . D MG 1535 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.512 ? 
metalc ? metalc34 T MG MG . D MG 1535 1_555 Z O HOH . D HOH 2001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.517 ? 
metalc ? metalc35 U O21 UAG . D UAG 1536 1_555 V MG MG . D MG 1537 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.236 ? 
#
_chem_comp.formula           'Mg 2' 
_chem_comp.formula_weight    24.305 
_chem_comp.id                MG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'MAGNESIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     2XJA 
_atom_sites.fract_transf_matrix[1][1]    0.013326 
_atom_sites.fract_transf_matrix[1][2]    0.000675 
_atom_sites.fract_transf_matrix[1][3]    0.00062 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.01312 
_atom_sites.fract_transf_matrix[2][3]    0.00515 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.013107 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 ADP A 1 1533 1533 ADP ADP . 
F 3 MG A 1 1534 1534 MG MG . 
G 3 MG A 1 1535 1535 MG MG . 
H 4 UAG A 1 1536 1536 UAG UAG . 
I 3 MG B 1 1533 1533 MG MG . 
J 2 ADP B 1 1534 1534 ADP ADP . 
K 3 MG B 1 1535 1535 MG MG . 
L 4 UAG B 1 1536 1536 UAG UAG . 
M 3 MG B 1 1537 1537 MG MG . 
N 2 ADP C 1 1533 1533 ADP ADP . 
O 3 MG C 1 1534 1534 MG MG . 
P 4 UAG C 1 1535 1535 UAG UAG . 
Q 3 MG C 1 1536 1536 MG MG . 
R 3 MG D 1 1533 1533 MG MG . 
S 2 ADP D 1 1534 1534 ADP ADP . 
T 3 MG D 1 1535 1535 MG MG . 
U 4 UAG D 1 1536 1536 UAG UAG . 
V 3 MG D 1 1537 1537 MG MG . 
W 5 HOH A 1 2001 2001 HOH HOH . 
X 5 HOH B 1 2001 2001 HOH HOH . 
Y 5 HOH C 1 2001 2001 HOH HOH . 
Z 5 HOH D 1 2001 2001 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           MG 
_atom_site.label_atom_id         MG 
_atom_site.label_comp_id         MG 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         F 
_atom_site.label_entity_id       3 
_atom_site.Cartn_x               -2.494 
_atom_site.Cartn_y               -0.749 
_atom_site.Cartn_z               1.208 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        48.56 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          MG 
_atom_site.auth_comp_id          MG 
_atom_site.auth_seq_id           1534 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              27 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    14 
_model_server_stats.query_time_ms           232 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           1 
#