data_2XJX # _model_server_result.job_id usbht6INiy3A0MPWCBeqxg _model_server_result.datetime_utc '2024-12-26 22:51:03' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2xjx # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1232}' # _entry.id 2XJX # _exptl.entry_id 2XJX _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 409.521 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description Onalespib _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 101.86 _cell.angle_gamma 90 _cell.entry_id 2XJX _cell.length_a 44.95 _cell.length_b 41.05 _cell.length_c 49.23 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2XJX _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C24 H31 N3 O3' _chem_comp.formula_weight 409.521 _chem_comp.id XJX _chem_comp.mon_nstd_flag . _chem_comp.name Onalespib _chem_comp.type non-polymer _chem_comp.pdbx_synonyms AT13387 # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 XJX sing 363 n n C2 C3 XJX sing 364 n n C2 C4 XJX sing 365 n n C4 C5 XJX sing 366 n y C4 C31 XJX doub 367 n y C5 C6 XJX doub 368 n y C6 C7 XJX sing 369 n n C6 C28 XJX sing 370 n y C7 O8 XJX doub 371 n n C7 N9 XJX sing 372 n n N9 C10 XJX sing 373 n n N9 C27 XJX sing 374 n n C10 C11 XJX sing 375 n n C11 C12 XJX sing 376 n y C11 C26 XJX doub 377 n y C12 C13 XJX doub 378 n y C13 C14 XJX sing 379 n y C14 C15 XJX sing 380 n n C14 C25 XJX doub 381 n y C15 N16 XJX sing 382 n n N16 C18 XJX sing 383 n n N16 C24 XJX sing 384 n n C18 C19 XJX sing 385 n n C19 N20 XJX sing 386 n n N20 C22 XJX sing 387 n n N20 C23 XJX sing 388 n n C23 C24 XJX sing 389 n n C25 C26 XJX sing 390 n y C26 C27 XJX sing 391 n n C28 O29 XJX sing 392 n n C28 C30 XJX doub 393 n y C30 C31 XJX sing 394 n y C31 O32 XJX sing 395 n n C1 H11C XJX sing 396 n n C1 H12C XJX sing 397 n n C1 H13C XJX sing 398 n n C2 H2 XJX sing 399 n n C3 H31C XJX sing 400 n n C3 H32C XJX sing 401 n n C3 H33C XJX sing 402 n n C5 H5 XJX sing 403 n n C10 H10A XJX sing 404 n n C10 H10B XJX sing 405 n n C27 H27A XJX sing 406 n n C27 H27B XJX sing 407 n n C12 H12 XJX sing 408 n n C13 H13 XJX sing 409 n n C15 H151 XJX sing 410 n n C15 H152 XJX sing 411 n n C25 H25 XJX sing 412 n n C18 H181 XJX sing 413 n n C18 H182 XJX sing 414 n n C24 H241 XJX sing 415 n n C24 H242 XJX sing 416 n n C19 H191 XJX sing 417 n n C19 H192 XJX sing 418 n n C22 H221 XJX sing 419 n n C22 H222 XJX sing 420 n n C22 H223 XJX sing 421 n n C23 H231 XJX sing 422 n n C23 H232 XJX sing 423 n n O29 H29 XJX sing 424 n n C30 H30 XJX sing 425 n n O32 H32 XJX sing 426 n n # _atom_sites.entry_id 2XJX _atom_sites.fract_transf_matrix[1][1] 0.022247 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.004672 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.024361 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.020756 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 XJX A 1 1232 1232 XJX XJX . C 3 HOH A 1 2001 2001 HOH HOH . C 3 HOH A 2 2002 2002 HOH HOH . C 3 HOH A 3 2003 2003 HOH HOH . C 3 HOH A 4 2004 2004 HOH HOH . C 3 HOH A 5 2005 2005 HOH HOH . C 3 HOH A 6 2006 2006 HOH HOH . C 3 HOH A 7 2007 2007 HOH HOH . C 3 HOH A 8 2008 2008 HOH HOH . C 3 HOH A 9 2009 2009 HOH HOH . C 3 HOH A 10 2010 2010 HOH HOH . C 3 HOH A 11 2011 2011 HOH HOH . C 3 HOH A 12 2012 2012 HOH HOH . C 3 HOH A 13 2013 2013 HOH HOH . C 3 HOH A 14 2014 2014 HOH HOH . C 3 HOH A 15 2015 2015 HOH HOH . C 3 HOH A 16 2016 2016 HOH HOH . C 3 HOH A 17 2017 2017 HOH HOH . C 3 HOH A 18 2018 2018 HOH HOH . C 3 HOH A 19 2019 2019 HOH HOH . C 3 HOH A 20 2020 2020 HOH HOH . C 3 HOH A 21 2021 2021 HOH HOH . C 3 HOH A 22 2022 2022 HOH HOH . C 3 HOH A 23 2023 2023 HOH HOH . C 3 HOH A 24 2024 2024 HOH HOH . C 3 HOH A 25 2025 2025 HOH HOH . C 3 HOH A 26 2026 2026 HOH HOH . C 3 HOH A 27 2027 2027 HOH HOH . C 3 HOH A 28 2028 2028 HOH HOH . C 3 HOH A 29 2029 2029 HOH HOH . C 3 HOH A 30 2030 2030 HOH HOH . C 3 HOH A 31 2031 2031 HOH HOH . C 3 HOH A 32 2032 2032 HOH HOH . C 3 HOH A 33 2033 2033 HOH HOH . C 3 HOH A 34 2034 2034 HOH HOH . C 3 HOH A 35 2035 2035 HOH HOH . C 3 HOH A 36 2036 2036 HOH HOH . C 3 HOH A 37 2037 2037 HOH HOH . C 3 HOH A 38 2038 2038 HOH HOH . C 3 HOH A 39 2039 2039 HOH HOH . C 3 HOH A 40 2040 2040 HOH HOH . C 3 HOH A 41 2041 2041 HOH HOH . C 3 HOH A 42 2042 2042 HOH HOH . C 3 HOH A 43 2043 2043 HOH HOH . C 3 HOH A 44 2044 2044 HOH HOH . C 3 HOH A 45 2045 2045 HOH HOH . C 3 HOH A 46 2046 2046 HOH HOH . C 3 HOH A 47 2047 2047 HOH HOH . C 3 HOH A 48 2048 2048 HOH HOH . C 3 HOH A 49 2049 2049 HOH HOH . C 3 HOH A 50 2050 2050 HOH HOH . C 3 HOH A 51 2051 2051 HOH HOH . C 3 HOH A 52 2052 2052 HOH HOH . C 3 HOH A 53 2053 2053 HOH HOH . C 3 HOH A 54 2054 2054 HOH HOH . C 3 HOH A 55 2055 2055 HOH HOH . C 3 HOH A 56 2056 2056 HOH HOH . C 3 HOH A 57 2057 2057 HOH HOH . C 3 HOH A 58 2058 2058 HOH HOH . C 3 HOH A 59 2059 2059 HOH HOH . C 3 HOH A 60 2060 2060 HOH HOH . C 3 HOH A 61 2061 2061 HOH HOH . C 3 HOH A 62 2062 2062 HOH HOH . C 3 HOH A 63 2063 2063 HOH HOH . C 3 HOH A 64 2064 2064 HOH HOH . C 3 HOH A 65 2065 2065 HOH HOH . C 3 HOH A 66 2066 2066 HOH HOH . C 3 HOH A 67 2067 2067 HOH HOH . C 3 HOH A 68 2068 2068 HOH HOH . C 3 HOH A 69 2069 2069 HOH HOH . C 3 HOH A 70 2070 2070 HOH HOH . C 3 HOH A 71 2071 2071 HOH HOH . C 3 HOH A 72 2072 2072 HOH HOH . C 3 HOH A 73 2073 2073 HOH HOH . C 3 HOH A 74 2074 2074 HOH HOH . C 3 HOH A 75 2075 2075 HOH HOH . C 3 HOH A 76 2076 2076 HOH HOH . C 3 HOH A 77 2077 2077 HOH HOH . C 3 HOH A 78 2078 2078 HOH HOH . C 3 HOH A 79 2079 2079 HOH HOH . C 3 HOH A 80 2080 2080 HOH HOH . C 3 HOH A 81 2081 2081 HOH HOH . C 3 HOH A 82 2082 2082 HOH HOH . C 3 HOH A 83 2083 2083 HOH HOH . C 3 HOH A 84 2084 2084 HOH HOH . C 3 HOH A 85 2085 2085 HOH HOH . C 3 HOH A 86 2086 2086 HOH HOH . C 3 HOH A 87 2087 2087 HOH HOH . C 3 HOH A 88 2088 2088 HOH HOH . C 3 HOH A 89 2089 2089 HOH HOH . C 3 HOH A 90 2090 2090 HOH HOH . C 3 HOH A 91 2091 2091 HOH HOH . C 3 HOH A 92 2092 2092 HOH HOH . C 3 HOH A 93 2093 2093 HOH HOH . C 3 HOH A 94 2094 2094 HOH HOH . C 3 HOH A 95 2095 2095 HOH HOH . C 3 HOH A 96 2096 2096 HOH HOH . C 3 HOH A 97 2097 2097 HOH HOH . C 3 HOH A 98 2098 2098 HOH HOH . C 3 HOH A 99 2099 2099 HOH HOH . C 3 HOH A 100 2100 2100 HOH HOH . C 3 HOH A 101 2101 2101 HOH HOH . C 3 HOH A 102 2102 2102 HOH HOH . C 3 HOH A 103 2103 2103 HOH HOH . C 3 HOH A 104 2104 2104 HOH HOH . C 3 HOH A 105 2105 2105 HOH HOH . C 3 HOH A 106 2106 2106 HOH HOH . C 3 HOH A 107 2107 2107 HOH HOH . C 3 HOH A 108 2108 2108 HOH HOH . C 3 HOH A 109 2109 2109 HOH HOH . C 3 HOH A 110 2110 2110 HOH HOH . C 3 HOH A 111 2111 2111 HOH HOH . C 3 HOH A 112 2112 2112 HOH HOH . C 3 HOH A 113 2113 2113 HOH HOH . C 3 HOH A 114 2114 2114 HOH HOH . C 3 HOH A 115 2115 2115 HOH HOH . C 3 HOH A 116 2116 2116 HOH HOH . C 3 HOH A 117 2117 2117 HOH HOH . C 3 HOH A 118 2118 2118 HOH HOH . C 3 HOH A 119 2119 2119 HOH HOH . C 3 HOH A 120 2120 2120 HOH HOH . C 3 HOH A 121 2121 2121 HOH HOH . C 3 HOH A 122 2122 2122 HOH HOH . C 3 HOH A 123 2123 2123 HOH HOH . C 3 HOH A 124 2124 2124 HOH HOH . C 3 HOH A 125 2125 2125 HOH HOH . C 3 HOH A 126 2126 2126 HOH HOH . C 3 HOH A 127 2127 2127 HOH HOH . C 3 HOH A 128 2128 2128 HOH HOH . C 3 HOH A 129 2129 2129 HOH HOH . C 3 HOH A 130 2130 2130 HOH HOH . C 3 HOH A 131 2131 2131 HOH HOH . C 3 HOH A 132 2132 2132 HOH HOH . C 3 HOH A 133 2133 2133 HOH HOH . C 3 HOH A 134 2134 2134 HOH HOH . C 3 HOH A 135 2135 2135 HOH HOH . C 3 HOH A 136 2136 2136 HOH HOH . C 3 HOH A 137 2137 2137 HOH HOH . C 3 HOH A 138 2138 2138 HOH HOH . C 3 HOH A 139 2139 2139 HOH HOH . C 3 HOH A 140 2140 2140 HOH HOH . C 3 HOH A 141 2141 2141 HOH HOH . C 3 HOH A 142 2142 2142 HOH HOH . C 3 HOH A 143 2143 2143 HOH HOH . C 3 HOH A 144 2144 2144 HOH HOH . C 3 HOH A 145 2145 2145 HOH HOH . C 3 HOH A 146 2146 2146 HOH HOH . C 3 HOH A 147 2147 2147 HOH HOH . C 3 HOH A 148 2148 2148 HOH HOH . C 3 HOH A 149 2149 2149 HOH HOH . C 3 HOH A 150 2150 2150 HOH HOH . C 3 HOH A 151 2151 2151 HOH HOH . C 3 HOH A 152 2152 2152 HOH HOH . C 3 HOH A 153 2153 2153 HOH HOH . C 3 HOH A 154 2154 2154 HOH HOH . C 3 HOH A 155 2155 2155 HOH HOH . C 3 HOH A 156 2156 2156 HOH HOH . C 3 HOH A 157 2157 2157 HOH HOH . C 3 HOH A 158 2158 2158 HOH HOH . C 3 HOH A 159 2159 2159 HOH HOH . C 3 HOH A 160 2160 2160 HOH HOH . C 3 HOH A 161 2161 2161 HOH HOH . C 3 HOH A 162 2162 2162 HOH HOH . C 3 HOH A 163 2163 2163 HOH HOH . C 3 HOH A 164 2164 2164 HOH HOH . C 3 HOH A 165 2165 2165 HOH HOH . C 3 HOH A 166 2166 2166 HOH HOH . C 3 HOH A 167 2167 2167 HOH HOH . C 3 HOH A 168 2168 2168 HOH HOH . C 3 HOH A 169 2169 2169 HOH HOH . C 3 HOH A 170 2170 2170 HOH HOH . C 3 HOH A 171 2171 2171 HOH HOH . C 3 HOH A 172 2172 2172 HOH HOH . C 3 HOH A 173 2173 2173 HOH HOH . C 3 HOH A 174 2174 2174 HOH HOH . C 3 HOH A 175 2175 2175 HOH HOH . C 3 HOH A 176 2176 2176 HOH HOH . C 3 HOH A 177 2177 2177 HOH HOH . C 3 HOH A 178 2178 2178 HOH HOH . C 3 HOH A 179 2179 2179 HOH HOH . C 3 HOH A 180 2180 2180 HOH HOH . C 3 HOH A 181 2181 2181 HOH HOH . C 3 HOH A 182 2182 2182 HOH HOH . C 3 HOH A 183 2183 2183 HOH HOH . C 3 HOH A 184 2184 2184 HOH HOH . C 3 HOH A 185 2185 2185 HOH HOH . C 3 HOH A 186 2186 2186 HOH HOH . C 3 HOH A 187 2187 2187 HOH HOH . C 3 HOH A 188 2188 2188 HOH HOH . C 3 HOH A 189 2189 2189 HOH HOH . C 3 HOH A 190 2190 2190 HOH HOH . C 3 HOH A 191 2191 2191 HOH HOH . C 3 HOH A 192 2192 2192 HOH HOH . C 3 HOH A 193 2193 2193 HOH HOH . C 3 HOH A 194 2194 2194 HOH HOH . C 3 HOH A 195 2195 2195 HOH HOH . C 3 HOH A 196 2196 2196 HOH HOH . C 3 HOH A 197 2197 2197 HOH HOH . C 3 HOH A 198 2198 2198 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 XJX . . . B 2 13.79 0.293 10.8 1 15.54 ? C1 XJX 1232 A 1 HETATM 2 C C2 XJX . . . B 2 13.097 -0.409 9.627 1 12.98 ? C2 XJX 1232 A 1 HETATM 3 C C3 XJX . . . B 2 13.565 0.183 8.302 1 14.93 ? C3 XJX 1232 A 1 HETATM 4 C C4 XJX . . . B 2 13.28 -1.925 9.716 1 9.53 ? C4 XJX 1232 A 1 HETATM 5 C C5 XJX . . . B 2 14.378 -2.556 9.133 1 15.89 ? C5 XJX 1232 A 1 HETATM 6 C C6 XJX . . . B 2 14.593 -3.928 9.284 1 12.21 ? C6 XJX 1232 A 1 HETATM 7 C C7 XJX . . . B 2 15.763 -4.569 8.623 1 9.97 ? C7 XJX 1232 A 1 HETATM 8 O O8 XJX . . . B 2 16.684 -4.985 9.297 1 12.42 ? O8 XJX 1232 A 1 HETATM 9 N N9 XJX . . . B 2 15.793 -4.597 7.283 1 13.46 ? N9 XJX 1232 A 1 HETATM 10 C C10 XJX . . . B 2 16.882 -5.218 6.515 1 13.49 ? C10 XJX 1232 A 1 HETATM 11 C C11 XJX . . . B 2 16.266 -5.375 5.153 1 13.44 ? C11 XJX 1232 A 1 HETATM 12 C C12 XJX . . . B 2 16.789 -5.984 4.019 1 17.34 ? C12 XJX 1232 A 1 HETATM 13 C C13 XJX . . . B 2 16.053 -6.015 2.848 1 16.78 ? C13 XJX 1232 A 1 HETATM 14 C C14 XJX . . . B 2 14.788 -5.437 2.793 1 25.83 ? C14 XJX 1232 A 1 HETATM 15 C C15 XJX . . . B 2 13.987 -5.448 1.514 1 39.58 ? C15 XJX 1232 A 1 HETATM 16 N N16 XJX . . . B 2 14.297 -4.266 0.628 1 54.9 ? N16 XJX 1232 A 1 HETATM 17 C C18 XJX . . . B 2 14.308 -2.986 1.412 1 62.09 ? C18 XJX 1232 A 1 HETATM 18 C C19 XJX . . . B 2 14.638 -1.795 0.524 1 64.75 ? C19 XJX 1232 A 1 HETATM 19 N N20 XJX . . . B 2 15.958 -2.012 -0.141 1 66.96 ? N20 XJX 1232 A 1 HETATM 20 C C22 XJX . . . B 2 16.369 -0.825 -0.948 1 67.04 ? C22 XJX 1232 A 1 HETATM 21 C C23 XJX . . . B 2 15.912 -3.253 -0.973 1 63.79 ? C23 XJX 1232 A 1 HETATM 22 C C24 XJX . . . B 2 15.599 -4.453 -0.093 1 59.84 ? C24 XJX 1232 A 1 HETATM 23 C C25 XJX . . . B 2 14.282 -4.834 3.941 1 22.06 ? C25 XJX 1232 A 1 HETATM 24 C C26 XJX . . . B 2 15.019 -4.81 5.112 1 12.57 ? C26 XJX 1232 A 1 HETATM 25 C C27 XJX . . . B 2 14.667 -4.183 6.433 1 12 ? C27 XJX 1232 A 1 HETATM 26 C C28 XJX . . . B 2 13.715 -4.685 10.039 1 11.17 ? C28 XJX 1232 A 1 HETATM 27 O O29 XJX . . . B 2 13.937 -6.03 10.185 1 12.2 ? O29 XJX 1232 A 1 HETATM 28 C C30 XJX . . . B 2 12.626 -4.073 10.659 1 12.43 ? C30 XJX 1232 A 1 HETATM 29 C C31 XJX . . . B 2 12.417 -2.711 10.512 1 10.77 ? C31 XJX 1232 A 1 HETATM 30 O O32 XJX . . . B 2 11.32 -2.163 11.117 1 13.22 ? O32 XJX 1232 A 1 # _model_server_stats.io_time_ms 23 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 315 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 30 #