data_2XK1 # _model_server_result.job_id lsBiY8VD7lBlQBlvi3jZ5g _model_server_result.datetime_utc '2024-11-18 03:41:37' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2xk1 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":610}' # _entry.id 2XK1 # _exptl.entry_id 2XK1 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 58.933 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'COBALT (II) ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 92.25 _cell.angle_gamma 90 _cell.entry_id 2XK1 _cell.length_a 154.898 _cell.length_b 92.348 _cell.length_c 143.829 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2XK1 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 PISA monomeric 1 author_and_software_defined_assembly 3 PISA monomeric 1 author_and_software_defined_assembly 4 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,E,F,G,H,I,J,K,CA 1 1 B,L,M,N,O,P,DA 2 1 C,Q,R,S,T,U,EA 3 1 D,V,W,X,Y,Z,AA,BA,FA 4 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 J N N ? 4 K N N ? 4 AA N N ? 4 BA N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A OG SER 49 A SER 49 1_555 E B EWB . A EWB 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.496 ? covale ? covale2 B OG SER 49 B SER 49 1_555 L B EWB . B EWB 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.489 ? covale ? covale3 C OG SER 49 C SER 49 1_555 Q B EWB . C EWB 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.486 ? covale ? covale4 D OG SER 49 D SER 49 1_555 V B EWB . D EWB 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.484 ? metalc ? metalc1 A OD1 ASP 181 A ASP 181 4_446 K CO CO . A CO 611 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.059 ? metalc ? metalc2 A OD1 ASP 183 A ASP 183 4_446 K CO CO . A CO 611 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.513 ? metalc ? metalc3 A O GLU 188 A GLU 188 1_555 J CO CO . A CO 610 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.186 ? metalc ? metalc4 A NE2 HIS 247 A HIS 247 1_555 J CO CO . A CO 610 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.276 ? metalc ? metalc5 A OE2 GLU 251 A GLU 251 1_555 J CO CO . A CO 610 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.779 ? metalc ? metalc6 A OE1 GLU 251 A GLU 251 1_555 J CO CO . A CO 610 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.193 ? metalc ? metalc7 A ND1 HIS 462 A HIS 462 1_555 K CO CO . A CO 611 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.08 ? metalc ? metalc8 A OE1 GLU 466 A GLU 466 4_456 J CO CO . A CO 610 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.337 ? metalc ? metalc9 D O GLU 188 D GLU 188 1_555 AA CO CO . D CO 610 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.087 ? metalc ? metalc10 D NE2 HIS 247 D HIS 247 1_555 AA CO CO . D CO 610 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.504 ? metalc ? metalc11 D OE1 GLU 251 D GLU 251 1_555 AA CO CO . D CO 610 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.634 ? metalc ? metalc12 D ND1 HIS 462 D HIS 462 1_555 BA CO CO . D CO 611 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.333 ? # _chem_comp.formula 'Co 2' _chem_comp.formula_weight 58.933 _chem_comp.id CO _chem_comp.mon_nstd_flag . _chem_comp.name 'COBALT (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 2XK1 _atom_sites.fract_transf_matrix[1][1] 0.006456 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000254 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010829 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006958 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 EWB A 1 500 500 EWB EWB . F 3 SO4 A 1 601 601 SO4 SO4 . G 3 SO4 A 1 602 602 SO4 SO4 . H 3 SO4 A 1 603 603 SO4 SO4 . I 3 SO4 A 1 604 604 SO4 SO4 . J 4 CO A 1 610 610 CO CO . K 4 CO A 1 611 611 CO CO . L 2 EWB B 1 500 500 EWB EWB . M 3 SO4 B 1 601 601 SO4 SO4 . N 3 SO4 B 1 602 602 SO4 SO4 . O 3 SO4 B 1 603 603 SO4 SO4 . P 3 SO4 B 1 604 604 SO4 SO4 . Q 2 EWB C 1 500 500 EWB EWB . R 3 SO4 C 1 601 601 SO4 SO4 . S 3 SO4 C 1 602 602 SO4 SO4 . T 3 SO4 C 1 603 603 SO4 SO4 . U 3 SO4 C 1 604 604 SO4 SO4 . V 2 EWB D 1 500 500 EWB EWB . W 3 SO4 D 1 601 601 SO4 SO4 . X 3 SO4 D 1 602 602 SO4 SO4 . Y 3 SO4 D 1 603 603 SO4 SO4 . Z 3 SO4 D 1 604 604 SO4 SO4 . AA 4 CO D 1 610 610 CO CO . BA 4 CO D 1 611 611 CO CO . CA 5 HOH A 1 2001 2001 HOH HOH . CA 5 HOH A 2 2002 2002 HOH HOH . CA 5 HOH A 3 2003 2003 HOH HOH . CA 5 HOH A 4 2004 2004 HOH HOH . CA 5 HOH A 5 2005 2005 HOH HOH . CA 5 HOH A 6 2006 2006 HOH HOH . CA 5 HOH A 7 2007 2007 HOH HOH . CA 5 HOH A 8 2008 2008 HOH HOH . CA 5 HOH A 9 2009 2009 HOH HOH . CA 5 HOH A 10 2010 2010 HOH HOH . CA 5 HOH A 11 2011 2011 HOH HOH . CA 5 HOH A 12 2012 2012 HOH HOH . CA 5 HOH A 13 2013 2013 HOH HOH . CA 5 HOH A 14 2014 2014 HOH HOH . CA 5 HOH A 15 2015 2015 HOH HOH . CA 5 HOH A 16 2016 2016 HOH HOH . CA 5 HOH A 17 2017 2017 HOH HOH . CA 5 HOH A 18 2018 2018 HOH HOH . CA 5 HOH A 19 2019 2019 HOH HOH . CA 5 HOH A 20 2020 2020 HOH HOH . CA 5 HOH A 21 2021 2021 HOH HOH . CA 5 HOH A 22 2022 2022 HOH HOH . CA 5 HOH A 23 2023 2023 HOH HOH . CA 5 HOH A 24 2024 2024 HOH HOH . CA 5 HOH A 25 2025 2025 HOH HOH . CA 5 HOH A 26 2026 2026 HOH HOH . CA 5 HOH A 27 2027 2027 HOH HOH . CA 5 HOH A 28 2028 2028 HOH HOH . CA 5 HOH A 29 2029 2029 HOH HOH . CA 5 HOH A 30 2030 2030 HOH HOH . CA 5 HOH A 31 2031 2031 HOH HOH . CA 5 HOH A 32 2032 2032 HOH HOH . CA 5 HOH A 33 2033 2033 HOH HOH . CA 5 HOH A 34 2034 2034 HOH HOH . CA 5 HOH A 35 2035 2035 HOH HOH . CA 5 HOH A 36 2036 2036 HOH HOH . CA 5 HOH A 37 2037 2037 HOH HOH . CA 5 HOH A 38 2038 2038 HOH HOH . CA 5 HOH A 39 2039 2039 HOH HOH . CA 5 HOH A 40 2040 2040 HOH HOH . CA 5 HOH A 41 2041 2041 HOH HOH . CA 5 HOH A 42 2042 2042 HOH HOH . CA 5 HOH A 43 2043 2043 HOH HOH . CA 5 HOH A 44 2044 2044 HOH HOH . CA 5 HOH A 45 2045 2045 HOH HOH . CA 5 HOH A 46 2046 2046 HOH HOH . CA 5 HOH A 47 2047 2047 HOH HOH . CA 5 HOH A 48 2048 2048 HOH HOH . CA 5 HOH A 49 2049 2049 HOH HOH . CA 5 HOH A 50 2050 2050 HOH HOH . CA 5 HOH A 51 2051 2051 HOH HOH . CA 5 HOH A 52 2052 2052 HOH HOH . CA 5 HOH A 53 2053 2053 HOH HOH . CA 5 HOH A 54 2054 2054 HOH HOH . CA 5 HOH A 55 2055 2055 HOH HOH . CA 5 HOH A 56 2056 2056 HOH HOH . CA 5 HOH A 57 2057 2057 HOH HOH . CA 5 HOH A 58 2058 2058 HOH HOH . DA 5 HOH B 1 2001 2001 HOH HOH . DA 5 HOH B 2 2002 2002 HOH HOH . DA 5 HOH B 3 2003 2003 HOH HOH . DA 5 HOH B 4 2004 2004 HOH HOH . DA 5 HOH B 5 2005 2005 HOH HOH . DA 5 HOH B 6 2006 2006 HOH HOH . DA 5 HOH B 7 2007 2007 HOH HOH . DA 5 HOH B 8 2008 2008 HOH HOH . DA 5 HOH B 9 2009 2009 HOH HOH . DA 5 HOH B 10 2010 2010 HOH HOH . DA 5 HOH B 11 2011 2011 HOH HOH . DA 5 HOH B 12 2012 2012 HOH HOH . DA 5 HOH B 13 2013 2013 HOH HOH . DA 5 HOH B 14 2014 2014 HOH HOH . DA 5 HOH B 15 2015 2015 HOH HOH . DA 5 HOH B 16 2016 2016 HOH HOH . DA 5 HOH B 17 2017 2017 HOH HOH . DA 5 HOH B 18 2018 2018 HOH HOH . DA 5 HOH B 19 2019 2019 HOH HOH . DA 5 HOH B 20 2020 2020 HOH HOH . DA 5 HOH B 21 2021 2021 HOH HOH . DA 5 HOH B 22 2022 2022 HOH HOH . DA 5 HOH B 23 2023 2023 HOH HOH . DA 5 HOH B 24 2024 2024 HOH HOH . DA 5 HOH B 25 2025 2025 HOH HOH . DA 5 HOH B 26 2026 2026 HOH HOH . DA 5 HOH B 27 2027 2027 HOH HOH . DA 5 HOH B 28 2028 2028 HOH HOH . DA 5 HOH B 29 2029 2029 HOH HOH . DA 5 HOH B 30 2030 2030 HOH HOH . DA 5 HOH B 31 2031 2031 HOH HOH . DA 5 HOH B 32 2032 2032 HOH HOH . DA 5 HOH B 33 2033 2033 HOH HOH . DA 5 HOH B 34 2034 2034 HOH HOH . DA 5 HOH B 35 2035 2035 HOH HOH . DA 5 HOH B 36 2036 2036 HOH HOH . DA 5 HOH B 37 2037 2037 HOH HOH . DA 5 HOH B 38 2038 2038 HOH HOH . DA 5 HOH B 39 2039 2039 HOH HOH . EA 5 HOH C 1 2001 2001 HOH HOH . EA 5 HOH C 2 2002 2002 HOH HOH . EA 5 HOH C 3 2003 2003 HOH HOH . EA 5 HOH C 4 2004 2004 HOH HOH . EA 5 HOH C 5 2005 2005 HOH HOH . EA 5 HOH C 6 2006 2006 HOH HOH . EA 5 HOH C 7 2007 2007 HOH HOH . EA 5 HOH C 8 2008 2008 HOH HOH . EA 5 HOH C 9 2009 2009 HOH HOH . EA 5 HOH C 10 2010 2010 HOH HOH . EA 5 HOH C 11 2011 2011 HOH HOH . EA 5 HOH C 12 2012 2012 HOH HOH . EA 5 HOH C 13 2013 2013 HOH HOH . EA 5 HOH C 14 2014 2014 HOH HOH . EA 5 HOH C 15 2015 2015 HOH HOH . EA 5 HOH C 16 2016 2016 HOH HOH . EA 5 HOH C 17 2017 2017 HOH HOH . EA 5 HOH C 18 2018 2018 HOH HOH . EA 5 HOH C 19 2019 2019 HOH HOH . EA 5 HOH C 20 2020 2020 HOH HOH . EA 5 HOH C 21 2021 2021 HOH HOH . EA 5 HOH C 22 2022 2022 HOH HOH . EA 5 HOH C 23 2023 2023 HOH HOH . EA 5 HOH C 24 2024 2024 HOH HOH . EA 5 HOH C 25 2025 2025 HOH HOH . EA 5 HOH C 26 2026 2026 HOH HOH . EA 5 HOH C 27 2027 2027 HOH HOH . EA 5 HOH C 28 2028 2028 HOH HOH . EA 5 HOH C 29 2029 2029 HOH HOH . EA 5 HOH C 30 2030 2030 HOH HOH . EA 5 HOH C 31 2031 2031 HOH HOH . EA 5 HOH C 32 2032 2032 HOH HOH . EA 5 HOH C 33 2033 2033 HOH HOH . EA 5 HOH C 34 2034 2034 HOH HOH . EA 5 HOH C 35 2035 2035 HOH HOH . EA 5 HOH C 36 2036 2036 HOH HOH . EA 5 HOH C 37 2037 2037 HOH HOH . EA 5 HOH C 38 2038 2038 HOH HOH . EA 5 HOH C 39 2039 2039 HOH HOH . EA 5 HOH C 40 2040 2040 HOH HOH . EA 5 HOH C 41 2041 2041 HOH HOH . FA 5 HOH D 1 2001 2001 HOH HOH . FA 5 HOH D 2 2002 2002 HOH HOH . FA 5 HOH D 3 2003 2003 HOH HOH . FA 5 HOH D 4 2004 2004 HOH HOH . FA 5 HOH D 5 2005 2005 HOH HOH . FA 5 HOH D 6 2006 2006 HOH HOH . FA 5 HOH D 7 2007 2007 HOH HOH . FA 5 HOH D 8 2008 2008 HOH HOH . FA 5 HOH D 9 2009 2009 HOH HOH . FA 5 HOH D 10 2010 2010 HOH HOH . FA 5 HOH D 11 2011 2011 HOH HOH . FA 5 HOH D 12 2012 2012 HOH HOH . FA 5 HOH D 13 2013 2013 HOH HOH . FA 5 HOH D 14 2014 2014 HOH HOH . FA 5 HOH D 15 2015 2015 HOH HOH . FA 5 HOH D 16 2016 2016 HOH HOH . FA 5 HOH D 17 2017 2017 HOH HOH . FA 5 HOH D 18 2018 2018 HOH HOH . FA 5 HOH D 19 2019 2019 HOH HOH . FA 5 HOH D 20 2020 2020 HOH HOH . FA 5 HOH D 21 2021 2021 HOH HOH . FA 5 HOH D 22 2022 2022 HOH HOH . FA 5 HOH D 23 2023 2023 HOH HOH . FA 5 HOH D 24 2024 2024 HOH HOH . FA 5 HOH D 25 2025 2025 HOH HOH . FA 5 HOH D 26 2026 2026 HOH HOH . FA 5 HOH D 27 2027 2027 HOH HOH . FA 5 HOH D 28 2028 2028 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CO _atom_site.label_atom_id CO _atom_site.label_comp_id CO _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id J _atom_site.label_entity_id 4 _atom_site.Cartn_x -26.339 _atom_site.Cartn_y 62.638 _atom_site.Cartn_z 81.767 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 58.85 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CO _atom_site.auth_comp_id CO _atom_site.auth_seq_id 610 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 34 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 21 _model_server_stats.query_time_ms 304 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #