data_2XK3 # _model_server_result.job_id ThABNUJljUUFWh_GvfDwDQ _model_server_result.datetime_utc '2024-12-26 22:29:41' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2xk3 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1280}' # _entry.id 2XK3 # _exptl.entry_id 2XK3 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 331.433 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '4-[3-AMINO-6-(3-ETHYLTHIOPHEN-2-YL)PYRAZIN-2-YL]CYCLOHEXANE-1-CARBOXYLIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 133.5 _cell.angle_gamma 90 _cell.entry_id 2XK3 _cell.length_a 101.03 _cell.length_b 57.09 _cell.length_c 81.41 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2XK3 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C17 H21 N3 O2 S' _chem_comp.formula_weight 331.433 _chem_comp.id XK3 _chem_comp.mon_nstd_flag . _chem_comp.name '4-[3-AMINO-6-(3-ETHYLTHIOPHEN-2-YL)PYRAZIN-2-YL]CYCLOHEXANE-1-CARBOXYLIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C01 C02 XK3 sing 376 n n C02 C03 XK3 sing 377 n n C03 C04 XK3 sing 378 n y C03 C07 XK3 doub 379 n y C04 C05 XK3 doub 380 n y C05 S06 XK3 sing 381 n y S06 C07 XK3 sing 382 n y C07 C08 XK3 sing 383 n y C08 C09 XK3 sing 384 n y C08 N23 XK3 doub 385 n y C09 N10 XK3 doub 386 n y N10 C11 XK3 sing 387 n y C11 N12 XK3 sing 388 n n C11 C13 XK3 doub 389 n y C13 C14 XK3 sing 390 n n C13 N23 XK3 sing 391 n y C14 C15 XK3 sing 392 n n C14 C22 XK3 sing 393 n n C15 C16 XK3 sing 394 n n C16 C17 XK3 sing 395 n n C17 C18 XK3 sing 396 n n C17 C21 XK3 sing 397 n n C18 O19 XK3 doub 398 n n C18 O20 XK3 sing 399 n n C21 C22 XK3 sing 400 n n C01 H011 XK3 sing 401 n n C01 H012 XK3 sing 402 n n C01 H013 XK3 sing 403 n n C02 H021 XK3 sing 404 n n C02 H022 XK3 sing 405 n n C04 H04 XK3 sing 406 n n C05 H05 XK3 sing 407 n n C09 H09 XK3 sing 408 n n N12 H121 XK3 sing 409 n n N12 H122 XK3 sing 410 n n C14 H14 XK3 sing 411 n n C15 H151 XK3 sing 412 n n C15 H152 XK3 sing 413 n n C22 H221 XK3 sing 414 n n C22 H222 XK3 sing 415 n n C16 H161 XK3 sing 416 n n C16 H162 XK3 sing 417 n n C17 H17 XK3 sing 418 n n C21 H211 XK3 sing 419 n n C21 H212 XK3 sing 420 n n O20 H20 XK3 sing 421 n n # _atom_sites.entry_id 2XK3 _atom_sites.fract_transf_matrix[1][1] 0.009898 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.009393 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017516 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016934 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 XK3 A 1 1280 1280 XK3 XK3 . C 3 CL A 1 1281 1281 CL CL . D 3 CL A 1 1282 1282 CL CL . E 4 HOH A 1 2001 2001 HOH HOH . E 4 HOH A 2 2002 2002 HOH HOH . E 4 HOH A 3 2003 2003 HOH HOH . E 4 HOH A 4 2004 2004 HOH HOH . E 4 HOH A 5 2005 2005 HOH HOH . E 4 HOH A 6 2006 2006 HOH HOH . E 4 HOH A 7 2007 2007 HOH HOH . E 4 HOH A 8 2008 2008 HOH HOH . E 4 HOH A 9 2009 2009 HOH HOH . E 4 HOH A 10 2010 2010 HOH HOH . E 4 HOH A 11 2011 2011 HOH HOH . E 4 HOH A 12 2012 2012 HOH HOH . E 4 HOH A 13 2013 2013 HOH HOH . E 4 HOH A 14 2014 2014 HOH HOH . E 4 HOH A 15 2015 2015 HOH HOH . E 4 HOH A 16 2016 2016 HOH HOH . E 4 HOH A 17 2017 2017 HOH HOH . E 4 HOH A 18 2018 2018 HOH HOH . E 4 HOH A 19 2019 2019 HOH HOH . E 4 HOH A 20 2020 2020 HOH HOH . E 4 HOH A 21 2021 2021 HOH HOH . E 4 HOH A 22 2022 2022 HOH HOH . E 4 HOH A 23 2023 2023 HOH HOH . E 4 HOH A 24 2024 2024 HOH HOH . E 4 HOH A 25 2025 2025 HOH HOH . E 4 HOH A 26 2026 2026 HOH HOH . E 4 HOH A 27 2027 2027 HOH HOH . E 4 HOH A 28 2028 2028 HOH HOH . E 4 HOH A 29 2029 2029 HOH HOH . E 4 HOH A 30 2030 2030 HOH HOH . E 4 HOH A 31 2031 2031 HOH HOH . E 4 HOH A 32 2032 2032 HOH HOH . E 4 HOH A 33 2033 2033 HOH HOH . E 4 HOH A 34 2034 2034 HOH HOH . E 4 HOH A 35 2035 2035 HOH HOH . E 4 HOH A 36 2036 2036 HOH HOH . E 4 HOH A 37 2037 2037 HOH HOH . E 4 HOH A 38 2038 2038 HOH HOH . E 4 HOH A 39 2039 2039 HOH HOH . E 4 HOH A 40 2040 2040 HOH HOH . E 4 HOH A 41 2041 2041 HOH HOH . E 4 HOH A 42 2042 2042 HOH HOH . E 4 HOH A 43 2043 2043 HOH HOH . E 4 HOH A 44 2044 2044 HOH HOH . E 4 HOH A 45 2045 2045 HOH HOH . E 4 HOH A 46 2046 2046 HOH HOH . E 4 HOH A 47 2047 2047 HOH HOH . E 4 HOH A 48 2048 2048 HOH HOH . E 4 HOH A 49 2049 2049 HOH HOH . E 4 HOH A 50 2050 2050 HOH HOH . E 4 HOH A 51 2051 2051 HOH HOH . E 4 HOH A 52 2052 2052 HOH HOH . E 4 HOH A 53 2053 2053 HOH HOH . E 4 HOH A 54 2054 2054 HOH HOH . E 4 HOH A 55 2055 2055 HOH HOH . E 4 HOH A 56 2056 2056 HOH HOH . E 4 HOH A 57 2057 2057 HOH HOH . E 4 HOH A 58 2058 2058 HOH HOH . E 4 HOH A 59 2059 2059 HOH HOH . E 4 HOH A 60 2060 2060 HOH HOH . E 4 HOH A 61 2061 2061 HOH HOH . E 4 HOH A 62 2062 2062 HOH HOH . E 4 HOH A 63 2063 2063 HOH HOH . E 4 HOH A 64 2064 2064 HOH HOH . E 4 HOH A 65 2065 2065 HOH HOH . E 4 HOH A 66 2066 2066 HOH HOH . E 4 HOH A 67 2067 2067 HOH HOH . E 4 HOH A 68 2068 2068 HOH HOH . E 4 HOH A 69 2069 2069 HOH HOH . E 4 HOH A 70 2070 2070 HOH HOH . E 4 HOH A 71 2071 2071 HOH HOH . E 4 HOH A 72 2072 2072 HOH HOH . E 4 HOH A 73 2073 2073 HOH HOH . E 4 HOH A 74 2074 2074 HOH HOH . E 4 HOH A 75 2075 2075 HOH HOH . E 4 HOH A 76 2076 2076 HOH HOH . E 4 HOH A 77 2077 2077 HOH HOH . E 4 HOH A 78 2078 2078 HOH HOH . E 4 HOH A 79 2079 2079 HOH HOH . E 4 HOH A 80 2080 2080 HOH HOH . E 4 HOH A 81 2081 2081 HOH HOH . E 4 HOH A 82 2082 2082 HOH HOH . E 4 HOH A 83 2083 2083 HOH HOH . E 4 HOH A 84 2084 2084 HOH HOH . E 4 HOH A 85 2085 2085 HOH HOH . E 4 HOH A 86 2086 2086 HOH HOH . E 4 HOH A 87 2087 2087 HOH HOH . E 4 HOH A 88 2088 2088 HOH HOH . E 4 HOH A 89 2089 2089 HOH HOH . E 4 HOH A 90 2090 2090 HOH HOH . E 4 HOH A 91 2091 2091 HOH HOH . E 4 HOH A 92 2092 2092 HOH HOH . E 4 HOH A 93 2093 2093 HOH HOH . E 4 HOH A 94 2094 2094 HOH HOH . E 4 HOH A 95 2095 2095 HOH HOH . E 4 HOH A 96 2096 2096 HOH HOH . E 4 HOH A 97 2097 2097 HOH HOH . E 4 HOH A 98 2098 2098 HOH HOH . E 4 HOH A 99 2099 2099 HOH HOH . E 4 HOH A 100 2100 2100 HOH HOH . E 4 HOH A 101 2101 2101 HOH HOH . E 4 HOH A 102 2102 2102 HOH HOH . E 4 HOH A 103 2103 2103 HOH HOH . E 4 HOH A 104 2104 2104 HOH HOH . E 4 HOH A 105 2105 2105 HOH HOH . E 4 HOH A 106 2106 2106 HOH HOH . E 4 HOH A 107 2107 2107 HOH HOH . E 4 HOH A 108 2108 2108 HOH HOH . E 4 HOH A 109 2109 2109 HOH HOH . E 4 HOH A 110 2110 2110 HOH HOH . E 4 HOH A 111 2111 2111 HOH HOH . E 4 HOH A 112 2112 2112 HOH HOH . E 4 HOH A 113 2113 2113 HOH HOH . E 4 HOH A 114 2114 2114 HOH HOH . E 4 HOH A 115 2115 2115 HOH HOH . E 4 HOH A 116 2116 2116 HOH HOH . E 4 HOH A 117 2117 2117 HOH HOH . E 4 HOH A 118 2118 2118 HOH HOH . E 4 HOH A 119 2119 2119 HOH HOH . E 4 HOH A 120 2120 2120 HOH HOH . E 4 HOH A 121 2121 2121 HOH HOH . E 4 HOH A 122 2122 2122 HOH HOH . E 4 HOH A 123 2123 2123 HOH HOH . E 4 HOH A 124 2124 2124 HOH HOH . E 4 HOH A 125 2125 2125 HOH HOH . E 4 HOH A 126 2126 2126 HOH HOH . E 4 HOH A 127 2127 2127 HOH HOH . E 4 HOH A 128 2128 2128 HOH HOH . E 4 HOH A 129 2129 2129 HOH HOH . E 4 HOH A 130 2130 2130 HOH HOH . E 4 HOH A 131 2131 2131 HOH HOH . E 4 HOH A 132 2132 2132 HOH HOH . E 4 HOH A 133 2133 2133 HOH HOH . E 4 HOH A 134 2134 2134 HOH HOH . E 4 HOH A 135 2135 2135 HOH HOH . E 4 HOH A 136 2136 2136 HOH HOH . E 4 HOH A 137 2137 2137 HOH HOH . E 4 HOH A 138 2138 2138 HOH HOH . E 4 HOH A 139 2139 2139 HOH HOH . E 4 HOH A 140 2140 2140 HOH HOH . E 4 HOH A 141 2141 2141 HOH HOH . E 4 HOH A 142 2142 2142 HOH HOH . E 4 HOH A 143 2143 2143 HOH HOH . E 4 HOH A 144 2144 2144 HOH HOH . E 4 HOH A 145 2145 2145 HOH HOH . E 4 HOH A 146 2146 2146 HOH HOH . E 4 HOH A 147 2147 2147 HOH HOH . E 4 HOH A 148 2148 2148 HOH HOH . E 4 HOH A 149 2149 2149 HOH HOH . E 4 HOH A 150 2150 2150 HOH HOH . E 4 HOH A 151 2151 2151 HOH HOH . E 4 HOH A 152 2152 2152 HOH HOH . E 4 HOH A 153 2153 2153 HOH HOH . E 4 HOH A 154 2154 2154 HOH HOH . E 4 HOH A 155 2155 2155 HOH HOH . E 4 HOH A 156 2156 2156 HOH HOH . E 4 HOH A 157 2157 2157 HOH HOH . E 4 HOH A 158 2158 2158 HOH HOH . E 4 HOH A 159 2159 2159 HOH HOH . E 4 HOH A 160 2160 2160 HOH HOH . E 4 HOH A 161 2161 2161 HOH HOH . E 4 HOH A 162 2162 2162 HOH HOH . E 4 HOH A 163 2163 2163 HOH HOH . E 4 HOH A 164 2164 2164 HOH HOH . E 4 HOH A 165 2165 2165 HOH HOH . E 4 HOH A 166 2166 2166 HOH HOH . E 4 HOH A 167 2167 2167 HOH HOH . E 4 HOH A 168 2168 2168 HOH HOH . E 4 HOH A 169 2169 2169 HOH HOH . E 4 HOH A 170 2170 2170 HOH HOH . E 4 HOH A 171 2171 2171 HOH HOH . E 4 HOH A 172 2172 2172 HOH HOH . E 4 HOH A 173 2173 2173 HOH HOH . E 4 HOH A 174 2174 2174 HOH HOH . E 4 HOH A 175 2175 2175 HOH HOH . E 4 HOH A 176 2176 2176 HOH HOH . E 4 HOH A 177 2177 2177 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C01 XK3 . . . B 2 28.548 9.085 -24.505 1 30.71 ? C01 XK3 1280 A 1 HETATM 2 C C02 XK3 . . . B 2 28.435 8.73 -23.064 1 28.19 ? C02 XK3 1280 A 1 HETATM 3 C C03 XK3 . . . B 2 27.846 9.8 -22.215 1 26.31 ? C03 XK3 1280 A 1 HETATM 4 C C04 XK3 . . . B 2 28.087 11.428 -22.402 1 27.57 ? C04 XK3 1280 A 1 HETATM 5 C C05 XK3 . . . B 2 27.28 12.15 -21.404 1 30.81 ? C05 XK3 1280 A 1 HETATM 6 S S06 XK3 . . . B 2 26.466 10.992 -20.5 1 28.76 ? S06 XK3 1280 A 1 HETATM 7 C C07 XK3 . . . B 2 26.859 9.603 -21.039 1 26.69 ? C07 XK3 1280 A 1 HETATM 8 C C08 XK3 . . . B 2 26.391 8.408 -20.508 1 23.69 ? C08 XK3 1280 A 1 HETATM 9 C C09 XK3 . . . B 2 26.37 7.21 -21.244 1 22.72 ? C09 XK3 1280 A 1 HETATM 10 N N10 XK3 . . . B 2 25.853 6.073 -20.64 1 22.23 ? N10 XK3 1280 A 1 HETATM 11 C C11 XK3 . . . B 2 25.339 6.12 -19.357 1 20.41 ? C11 XK3 1280 A 1 HETATM 12 N N12 XK3 . . . B 2 24.753 4.967 -18.764 1 23.84 ? N12 XK3 1280 A 1 HETATM 13 C C13 XK3 . . . B 2 25.334 7.332 -18.655 1 19.94 ? C13 XK3 1280 A 1 HETATM 14 C C14 XK3 . . . B 2 24.746 7.487 -17.279 1 23.29 ? C14 XK3 1280 A 1 HETATM 15 C C15 XK3 . . . B 2 25.403 8.451 -16.279 1 26.12 ? C15 XK3 1280 A 1 HETATM 16 C C16 XK3 . . . B 2 25.088 8.177 -14.819 1 31.67 ? C16 XK3 1280 A 1 HETATM 17 C C17 XK3 . . . B 2 23.603 7.957 -14.569 1 34.6 ? C17 XK3 1280 A 1 HETATM 18 C C18 XK3 . . . B 2 23.1 8.116 -13.184 1 44.95 ? C18 XK3 1280 A 1 HETATM 19 O O19 XK3 . . . B 2 23.452 9.077 -12.535 1 53.77 ? O19 XK3 1280 A 1 HETATM 20 O O20 XK3 . . . B 2 22.433 7.091 -12.565 1 47.01 ? O20 XK3 1280 A 1 HETATM 21 C C21 XK3 . . . B 2 22.976 6.908 -15.502 1 31.18 ? C21 XK3 1280 A 1 HETATM 22 C C22 XK3 . . . B 2 23.266 7.17 -16.98 1 28.21 ? C22 XK3 1280 A 1 HETATM 23 N N23 XK3 . . . B 2 25.848 8.468 -19.25 1 21.54 ? N23 XK3 1280 A 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 365 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 23 #