data_2XLS # _model_server_result.job_id x9_82ZS6TzKZRu8QL5mCOw _model_server_result.datetime_utc '2024-10-18 12:33:57' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2xls # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":1453}' # _entry.id 2XLS # _exptl.entry_id 2XLS _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 238.305 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 2XLS _cell.length_a 219.785 _cell.length_b 219.785 _cell.length_c 131.226 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2XLS _symmetry.cell_setting ? _symmetry.Int_Tables_number 169 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 61' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,D,E,F,G,N,O,P,Q,T 1 1 B,C,H,I,J,K,L,M,R,S 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 G N N ? 4 J N N ? 4 P N N # _chem_comp.formula 'C8 H18 N2 O4 S' _chem_comp.formula_weight 238.305 _chem_comp.id EPE _chem_comp.mon_nstd_flag . _chem_comp.name '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms HEPES # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 EPE sing 83 n n N1 C6 EPE sing 84 n n N1 C9 EPE sing 85 n n C2 C3 EPE sing 86 n n C2 H21 EPE sing 87 n n C2 H22 EPE sing 88 n n C3 N4 EPE sing 89 n n C3 H31 EPE sing 90 n n C3 H32 EPE sing 91 n n N4 C5 EPE sing 92 n n N4 C7 EPE sing 93 n n C5 C6 EPE sing 94 n n C5 H51 EPE sing 95 n n C5 H52 EPE sing 96 n n C6 H61 EPE sing 97 n n C6 H62 EPE sing 98 n n C7 C8 EPE sing 99 n n C7 H71 EPE sing 100 n n C7 H72 EPE sing 101 n n C8 O8 EPE sing 102 n n C8 H81 EPE sing 103 n n C8 H82 EPE sing 104 n n O8 HO8 EPE sing 105 n n C9 C10 EPE sing 106 n n C9 H91 EPE sing 107 n n C9 H92 EPE sing 108 n n C10 S EPE sing 109 n n C10 H101 EPE sing 110 n n C10 H102 EPE sing 111 n n S O1S EPE doub 112 n n S O2S EPE doub 113 n n S O3S EPE sing 114 n n O3S HOS3 EPE sing 115 n n # _atom_sites.entry_id 2XLS _atom_sites.fract_transf_matrix[1][1] 0.00455 _atom_sites.fract_transf_matrix[1][2] 0.002627 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005254 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00762 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 FAD A 1 500 500 FAD FAD . F 3 NAP A 1 501 501 NAP NAP . G 4 EPE A 1 1451 1451 EPE EPE . H 2 FAD B 1 500 500 FAD FAD . I 3 NAP B 1 501 501 NAP NAP . J 4 EPE B 1 1453 1453 EPE EPE . K 2 FAD C 1 500 500 FAD FAD . L 3 NAP C 1 501 501 NAP NAP . M 5 PEG C 1 1453 1453 PEG PEG . N 2 FAD D 1 500 500 FAD FAD . O 3 NAP D 1 501 501 NAP NAP . P 4 EPE D 1 1453 1453 EPE EPE . Q 6 HOH A 1 2001 2001 HOH HOH . Q 6 HOH A 2 2002 2002 HOH HOH . Q 6 HOH A 3 2003 2003 HOH HOH . Q 6 HOH A 4 2004 2004 HOH HOH . Q 6 HOH A 5 2005 2005 HOH HOH . R 6 HOH B 1 2001 2001 HOH HOH . R 6 HOH B 2 2002 2002 HOH HOH . R 6 HOH B 3 2003 2003 HOH HOH . R 6 HOH B 4 2004 2004 HOH HOH . R 6 HOH B 5 2005 2005 HOH HOH . R 6 HOH B 6 2006 2006 HOH HOH . R 6 HOH B 7 2007 2007 HOH HOH . S 6 HOH C 1 2001 2001 HOH HOH . S 6 HOH C 2 2002 2002 HOH HOH . S 6 HOH C 3 2003 2003 HOH HOH . S 6 HOH C 4 2004 2004 HOH HOH . S 6 HOH C 5 2005 2005 HOH HOH . T 6 HOH D 1 2001 2001 HOH HOH . T 6 HOH D 2 2002 2002 HOH HOH . T 6 HOH D 3 2003 2003 HOH HOH . T 6 HOH D 4 2004 2004 HOH HOH . T 6 HOH D 5 2005 2005 HOH HOH . T 6 HOH D 6 2006 2006 HOH HOH . T 6 HOH D 7 2007 2007 HOH HOH . T 6 HOH D 8 2008 2008 HOH HOH . T 6 HOH D 9 2009 2009 HOH HOH . T 6 HOH D 10 2010 2010 HOH HOH . T 6 HOH D 11 2011 2011 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 EPE . . . J 4 73.402 43.346 19.403 1 66.71 ? N1 EPE 1453 B 1 HETATM 2 C C2 EPE . . . J 4 72.85 44.329 18.416 1 66.37 ? C2 EPE 1453 B 1 HETATM 3 C C3 EPE . . . J 4 72.757 43.749 16.999 1 64.89 ? C3 EPE 1453 B 1 HETATM 4 N N4 EPE . . . J 4 72.216 42.389 17.096 1 67.79 ? N4 EPE 1453 B 1 HETATM 5 C C5 EPE . . . J 4 71.7 41.839 18.371 1 67.81 ? C5 EPE 1453 B 1 HETATM 6 C C6 EPE . . . J 4 72.494 42.184 19.647 1 66.74 ? C6 EPE 1453 B 1 HETATM 7 C C7 EPE . . . J 4 71.663 41.787 15.889 1 67.9 ? C7 EPE 1453 B 1 HETATM 8 C C8 EPE . . . J 4 72.713 41.315 14.876 1 65.89 ? C8 EPE 1453 B 1 HETATM 9 O O8 EPE . . . J 4 71.945 40.578 13.954 1 60.89 ? O8 EPE 1453 B 1 HETATM 10 C C9 EPE . . . J 4 73.884 43.984 20.65 1 63.96 ? C9 EPE 1453 B 1 HETATM 11 C C10 EPE . . . J 4 72.704 43.942 21.618 1 62.13 ? C10 EPE 1453 B 1 HETATM 12 S S EPE . . . J 4 72.841 45.01 23.084 1 61.12 ? S EPE 1453 B 1 HETATM 13 O O1S EPE . . . J 4 73.072 46.407 22.652 1 61.91 ? O1S EPE 1453 B 1 HETATM 14 O O2S EPE . . . J 4 73.914 44.501 23.963 1 59.76 ? O2S EPE 1453 B 1 HETATM 15 O O3S EPE . . . J 4 71.566 44.943 23.836 1 60.72 ? O3S EPE 1453 B 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 32 _model_server_stats.query_time_ms 313 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 15 #