data_2XMN # _model_server_result.job_id pX-C9VVGmBD9WhJ2yjqQlA _model_server_result.datetime_utc '2024-12-21 16:39:13' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2xmn # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":1429}' # _entry.id 2XMN # _exptl.entry_id 2XMN _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 510.615 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description DODECYL-BETA-D-MALTOSIDE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2XMN _cell.length_a 134.124 _cell.length_b 135.524 _cell.length_c 136.343 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2XMN _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C24 H46 O11' _chem_comp.formula_weight 510.615 _chem_comp.id LMT _chem_comp.mon_nstd_flag . _chem_comp.name DODECYL-BETA-D-MALTOSIDE _chem_comp.type d-saccharide _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1B C2B LMT sing 181 n n C1B O1B LMT sing 182 n n C1B O5B LMT sing 183 n n C1B H1B LMT sing 184 n n C2B C3B LMT sing 185 n n C2B O2B LMT sing 186 n n C2B H2B LMT sing 187 n n C3B C4B LMT sing 188 n n C3B O3B LMT sing 189 n n C3B H3B LMT sing 190 n n C4B C5B LMT sing 191 n n C4B O4' LMT sing 192 n n C4B H4B LMT sing 193 n n C5B C6B LMT sing 194 n n C5B O5B LMT sing 195 n n C5B H5B LMT sing 196 n n C6B O6B LMT sing 197 n n C6B "H6'2" LMT sing 198 n n C6B "H6'1" LMT sing 199 n n O1B C4' LMT sing 200 n n O2B H2O1 LMT sing 201 n n O3B H3O1 LMT sing 202 n n O4' H4O1 LMT sing 203 n n O6B H6B LMT sing 204 n n C1' C2' LMT sing 205 n n C1' O1' LMT sing 206 n n C1' O5' LMT sing 207 n n C1' H1' LMT sing 208 n n C2' C3' LMT sing 209 n n C2' O2' LMT sing 210 n n C2' H2' LMT sing 211 n n C3' C4' LMT sing 212 n n C3' O3' LMT sing 213 n n C3' H3' LMT sing 214 n n C4' C5' LMT sing 215 n n C4' H4' LMT sing 216 n n C5' C6' LMT sing 217 n n C5' O5' LMT sing 218 n n C5' H5' LMT sing 219 n n C6' O6' LMT sing 220 n n C6' H6D LMT sing 221 n n C6' H6E LMT sing 222 n n O1' C1 LMT sing 223 n n O2' H2O2 LMT sing 224 n n O3' H3O2 LMT sing 225 n n O6' H6' LMT sing 226 n n C1 C2 LMT sing 227 n n C1 H12 LMT sing 228 n n C1 H11 LMT sing 229 n n C2 C3 LMT sing 230 n n C2 H22 LMT sing 231 n n C2 H21 LMT sing 232 n n C3 C4 LMT sing 233 n n C3 H32 LMT sing 234 n n C3 H31 LMT sing 235 n n C4 C5 LMT sing 236 n n C4 H42 LMT sing 237 n n C4 H41 LMT sing 238 n n C5 C6 LMT sing 239 n n C5 H52 LMT sing 240 n n C5 H51 LMT sing 241 n n C6 C7 LMT sing 242 n n C6 H62 LMT sing 243 n n C6 H61 LMT sing 244 n n C7 C8 LMT sing 245 n n C7 H72 LMT sing 246 n n C7 H71 LMT sing 247 n n C8 C9 LMT sing 248 n n C8 H82 LMT sing 249 n n C8 H81 LMT sing 250 n n C9 C10 LMT sing 251 n n C9 H92 LMT sing 252 n n C9 H91 LMT sing 253 n n C10 C11 LMT sing 254 n n C10 H102 LMT sing 255 n n C10 H101 LMT sing 256 n n C11 C12 LMT sing 257 n n C11 H112 LMT sing 258 n n C11 H111 LMT sing 259 n n C12 H123 LMT sing 260 n n C12 H122 LMT sing 261 n n C12 H121 LMT sing 262 n n # _atom_sites.entry_id 2XMN _atom_sites.fract_transf_matrix[1][1] 0.007456 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007379 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007334 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 CL A 1 1429 1429 CL CL . E 3 LMT B 1 1429 1429 LMT LMT . F 2 CL B 1 1430 1430 CL CL . G 2 CL C 1 1429 1429 CL CL . H 4 HOH A 1 2001 2001 HOH HOH . H 4 HOH A 2 2002 2002 HOH HOH . H 4 HOH A 3 2003 2003 HOH HOH . H 4 HOH A 4 2004 2004 HOH HOH . H 4 HOH A 5 2005 2005 HOH HOH . H 4 HOH A 6 2006 2006 HOH HOH . H 4 HOH A 7 2007 2007 HOH HOH . H 4 HOH A 8 2008 2008 HOH HOH . H 4 HOH A 9 2009 2009 HOH HOH . I 4 HOH B 1 2001 2001 HOH HOH . I 4 HOH B 2 2002 2002 HOH HOH . I 4 HOH B 3 2003 2003 HOH HOH . I 4 HOH B 4 2004 2004 HOH HOH . I 4 HOH B 5 2005 2005 HOH HOH . I 4 HOH B 6 2006 2006 HOH HOH . I 4 HOH B 7 2007 2007 HOH HOH . I 4 HOH B 8 2008 2008 HOH HOH . J 4 HOH C 1 2001 2001 HOH HOH . J 4 HOH C 2 2002 2002 HOH HOH . J 4 HOH C 3 2003 2003 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1B LMT . . . E 3 -10.336 19.101 92.817 1 129.96 ? C1B LMT 1429 B 1 HETATM 2 C C2B LMT . . . E 3 -10.117 20.182 93.897 1 119.46 ? C2B LMT 1429 B 1 HETATM 3 C C3B LMT . . . E 3 -9.113 20.942 93.632 1 134.89 ? C3B LMT 1429 B 1 HETATM 4 C C4B LMT . . . E 3 -7.8 20.069 93.195 1 139.53 ? C4B LMT 1429 B 1 HETATM 5 C C5B LMT . . . E 3 -8.08 19.218 91.833 1 136.89 ? C5B LMT 1429 B 1 HETATM 6 C C6B LMT . . . E 3 -7.541 17.721 92.024 1 142.81 ? C6B LMT 1429 B 1 HETATM 7 O O1B LMT . . . E 3 -11.532 19.037 92.408 1 138.6 ? O1B LMT 1429 B 1 HETATM 8 O O2B LMT . . . E 3 -11.377 20.992 94.14 1 130.49 ? O2B LMT 1429 B 1 HETATM 9 O O3B LMT . . . E 3 -8.84 21.915 94.727 1 144.67 ? O3B LMT 1429 B 1 HETATM 10 O O4' LMT . . . E 3 -6.738 20.789 93.062 1 140.2 ? O4' LMT 1429 B 1 HETATM 11 O O5B LMT . . . E 3 -9.469 19.064 91.703 1 129.21 ? O5B LMT 1429 B 1 HETATM 12 O O6B LMT . . . E 3 -7.869 16.818 91.044 1 142.6 ? O6B LMT 1429 B 1 HETATM 13 C C1' LMT . . . E 3 -13.516 15.423 91.013 1 123.15 ? C1' LMT 1429 B 1 HETATM 14 C C2' LMT . . . E 3 -12.971 15.538 92.519 1 123.48 ? C2' LMT 1429 B 1 HETATM 15 C C3' LMT . . . E 3 -12.499 16.876 93.014 1 117.53 ? C3' LMT 1429 B 1 HETATM 16 C C4' LMT . . . E 3 -11.79 17.635 92.02 1 118.3 ? C4' LMT 1429 B 1 HETATM 17 C C5' LMT . . . E 3 -12.324 17.589 90.576 1 117.6 ? C5' LMT 1429 B 1 HETATM 18 C C6' LMT . . . E 3 -11.085 17.788 89.856 1 99.88 ? C6' LMT 1429 B 1 HETATM 19 O O1' LMT . . . E 3 -13.525 14.061 90.533 1 111.83 ? O1' LMT 1429 B 1 HETATM 20 O O2' LMT . . . E 3 -13.836 14.946 93.503 1 130.67 ? O2' LMT 1429 B 1 HETATM 21 O O3' LMT . . . E 3 -11.649 16.669 94.211 1 101.88 ? O3' LMT 1429 B 1 HETATM 22 O O5' LMT . . . E 3 -12.932 16.293 90.046 1 108.8 ? O5' LMT 1429 B 1 HETATM 23 O O6' LMT . . . E 3 -9.974 17.303 90.563 1 95.93 ? O6' LMT 1429 B 1 HETATM 24 C C1 LMT . . . E 3 -14.588 13.602 89.687 1 117 ? C1 LMT 1429 B 1 HETATM 25 C C2 LMT . . . E 3 -15.03 12.122 89.773 1 122.71 ? C2 LMT 1429 B 1 HETATM 26 C C3 LMT . . . E 3 -14.577 11.125 88.687 1 117.08 ? C3 LMT 1429 B 1 HETATM 27 C C4 LMT . . . E 3 -15.639 10.361 87.867 1 114.03 ? C4 LMT 1429 B 1 HETATM 28 C C5 LMT . . . E 3 -15.195 9.652 86.581 1 129.38 ? C5 LMT 1429 B 1 HETATM 29 C C6 LMT . . . E 3 -15.275 10.403 85.245 1 114.5 ? C6 LMT 1429 B 1 HETATM 30 C C7 LMT . . . E 3 -16.58 10.407 84.474 1 144.18 ? C7 LMT 1429 B 1 HETATM 31 C C8 LMT . . . E 3 -16.878 11.625 83.6 1 158.16 ? C8 LMT 1429 B 1 HETATM 32 C C9 LMT . . . E 3 -18.311 11.949 83.169 1 165.2 ? C9 LMT 1429 B 1 HETATM 33 C C10 LMT . . . E 3 -19.418 11.967 84.214 1 190.97 ? C10 LMT 1429 B 1 HETATM 34 C C11 LMT . . . E 3 -20.841 12.221 83.752 1 195.98 ? C11 LMT 1429 B 1 HETATM 35 C C12 LMT . . . E 3 -21.985 11.744 84.653 1 164.76 ? C12 LMT 1429 B 1 # _model_server_stats.io_time_ms 21 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 14 _model_server_stats.query_time_ms 263 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 35 #