data_2XOW
#
_model_server_result.job_id            jA3PU9Wptdl_KYMLtueV7w 
_model_server_result.datetime_utc      '2024-11-25 14:16:57' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2xow 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":501}' 
#
_entry.id    2XOW 
#
_exptl.entry_id    2XOW 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              306.395 
_entity.id                          3 
_entity.src_method                  man 
_entity.type                        non-polymer 
_entity.pdbx_description            'nonyl beta-D-glucopyranoside' 
_entity.pdbx_number_of_molecules    16 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            2XOW 
_cell.length_a            110.69 
_cell.length_b            110.69 
_cell.length_c            122.151 
_cell.Z_PDB               18 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 2XOW 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        155 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'H 3 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 C N N 
? 3 D N N 
? 3 E N N 
? 3 F N N 
? 3 G N N 
? 3 H N N 
? 3 I N N 
? 3 J N N 
? 3 K N N 
? 3 L N N 
? 3 M N N 
? 3 N N N 
? 3 O N N 
? 3 P N N 
? 3 Q N N 
? 3 R N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A OG SER 110 A SER 201 1_555 B C1 ISM . A ISM 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.408 ? 
covale ? covale2 A NE2 HIS 163 A HIS 254 1_555 B C8 ISM . A ISM 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.453 ? 
#
_chem_comp.formula           'C15 H30 O6' 
_chem_comp.formula_weight    306.395 
_chem_comp.id                BNG 
_chem_comp.mon_nstd_flag     n 
_chem_comp.name              'nonyl beta-D-glucopyranoside' 
_chem_comp.type              d-saccharide 
_chem_comp.pdbx_synonyms     'Beta-NONYLGLUCOSIDE;nonyl beta-D-glucoside;nonyl D-glucoside;nonyl glucoside' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 BNG sing 70 n n 
C1 O1 BNG sing 71 n n 
C1 O5 BNG sing 72 n n 
C1 H1 BNG sing 73 n n 
C2 C3 BNG sing 74 n n 
C2 O2 BNG sing 75 n n 
C2 H2 BNG sing 76 n n 
C3 C4 BNG sing 77 n n 
C3 O3 BNG sing 78 n n 
C3 H3 BNG sing 79 n n 
C4 C5 BNG sing 80 n n 
C4 O4 BNG sing 81 n n 
C4 H4 BNG sing 82 n n 
C5 C6 BNG sing 83 n n 
C5 O5 BNG sing 84 n n 
C5 H5 BNG sing 85 n n 
C6 O6 BNG sing 86 n n 
C6 H61 BNG sing 87 n n 
C6 H62 BNG sing 88 n n 
C1' C2' BNG sing 89 n n 
C1' O1 BNG sing 90 n n 
C1' "H1'1" BNG sing 91 n n 
C1' "H1'2" BNG sing 92 n n 
C2' C3' BNG sing 93 n n 
C2' "H2'1" BNG sing 94 n n 
C2' "H2'2" BNG sing 95 n n 
C3' C4' BNG sing 96 n n 
C3' "H3'1" BNG sing 97 n n 
C3' "H3'2" BNG sing 98 n n 
C4' C5' BNG sing 99 n n 
C4' "H4'1" BNG sing 100 n n 
C4' "H4'2" BNG sing 101 n n 
C5' C6' BNG sing 102 n n 
C5' "H5'1" BNG sing 103 n n 
C5' "H5'2" BNG sing 104 n n 
C6' C7' BNG sing 105 n n 
C6' "H6'1" BNG sing 106 n n 
C6' "H6'2" BNG sing 107 n n 
C7' C8' BNG sing 108 n n 
C7' "H7'1" BNG sing 109 n n 
C7' "H7'2" BNG sing 110 n n 
C8' C9' BNG sing 111 n n 
C8' "H8'1" BNG sing 112 n n 
C8' "H8'2" BNG sing 113 n n 
C9' "H9'1" BNG sing 114 n n 
C9' "H9'2" BNG sing 115 n n 
C9' "H9'3" BNG sing 116 n n 
O2 HO2 BNG sing 117 n n 
O3 HO3 BNG sing 118 n n 
O4 HO4 BNG sing 119 n n 
O6 HO6 BNG sing 120 n n 
#
_pdbx_chem_comp_identifier.comp_id            BNG 
_pdbx_chem_comp_identifier.identifier         b-nonylglucoside 
_pdbx_chem_comp_identifier.type               'IUPAC CARBOHYDRATE SYMBOL' 
_pdbx_chem_comp_identifier.program            PDB-CARE 
_pdbx_chem_comp_identifier.program_version    1 
#
_atom_sites.entry_id                     2XOW 
_atom_sites.fract_transf_matrix[1][1]    0.009034 
_atom_sites.fract_transf_matrix[1][2]    0.005216 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.010432 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.008187 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 ISM A 1 401 401 ISM ISM . 
C 3 BNG A 1 501 501 BNG BNG . 
D 3 BNG A 1 502 502 BNG BNG . 
E 3 BNG A 1 503 503 BNG BNG . 
F 3 BNG A 1 504 504 BNG BNG . 
G 3 BNG A 1 505 505 BNG BNG . 
H 3 BNG A 1 506 506 BNG BNG . 
I 3 BNG A 1 507 507 BNG BNG . 
J 3 BNG A 1 508 508 BNG BNG . 
K 3 BNG A 1 509 509 BNG BNG . 
L 3 BNG A 1 510 510 BNG BNG . 
M 3 BNG A 1 511 511 BNG BNG . 
N 3 BNG A 1 512 512 BNG BNG . 
O 3 BNG A 1 513 513 BNG BNG . 
P 3 BNG A 1 514 514 BNG BNG . 
Q 3 BNG A 1 515 515 BNG BNG . 
R 3 BNG A 1 516 516 BNG BNG . 
S 4 HOH A 1 2001 2001 HOH HOH . 
S 4 HOH A 2 2002 2002 HOH HOH . 
S 4 HOH A 3 2003 2003 HOH HOH . 
S 4 HOH A 4 2004 2004 HOH HOH . 
S 4 HOH A 5 2005 2005 HOH HOH . 
S 4 HOH A 6 2006 2006 HOH HOH . 
S 4 HOH A 7 2007 2007 HOH HOH . 
S 4 HOH A 8 2008 2008 HOH HOH . 
S 4 HOH A 9 2009 2009 HOH HOH . 
S 4 HOH A 10 2010 2010 HOH HOH . 
S 4 HOH A 11 2011 2011 HOH HOH . 
S 4 HOH A 12 2012 2012 HOH HOH . 
S 4 HOH A 13 2013 2013 HOH HOH . 
S 4 HOH A 14 2014 2014 HOH HOH . 
S 4 HOH A 15 2015 2015 HOH HOH . 
S 4 HOH A 16 2016 2016 HOH HOH . 
S 4 HOH A 17 2017 2017 HOH HOH . 
S 4 HOH A 18 2018 2018 HOH HOH . 
S 4 HOH A 19 2019 2019 HOH HOH . 
S 4 HOH A 20 2020 2020 HOH HOH . 
S 4 HOH A 21 2021 2021 HOH HOH . 
S 4 HOH A 22 2022 2022 HOH HOH . 
S 4 HOH A 23 2023 2023 HOH HOH . 
S 4 HOH A 24 2024 2024 HOH HOH . 
S 4 HOH A 25 2025 2025 HOH HOH . 
S 4 HOH A 26 2026 2026 HOH HOH . 
S 4 HOH A 27 2027 2027 HOH HOH . 
S 4 HOH A 28 2028 2028 HOH HOH . 
S 4 HOH A 29 2029 2029 HOH HOH . 
S 4 HOH A 30 2030 2030 HOH HOH . 
S 4 HOH A 31 2031 2031 HOH HOH . 
S 4 HOH A 32 2032 2032 HOH HOH . 
S 4 HOH A 33 2033 2033 HOH HOH . 
S 4 HOH A 34 2034 2034 HOH HOH . 
S 4 HOH A 35 2035 2035 HOH HOH . 
S 4 HOH A 36 2036 2036 HOH HOH . 
S 4 HOH A 37 2037 2037 HOH HOH . 
S 4 HOH A 38 2038 2038 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1' BNG . . . C 3 12.007 -24.861 39.955 1 59.4 ? C1' BNG 501 A 1 
HETATM 2 C C2' BNG . . . C 3 11.255 -23.888 39.047 1 56.54 ? C2' BNG 501 A 1 
HETATM 3 C C3' BNG . . . C 3 11.824 -22.477 39.146 1 48.31 ? C3' BNG 501 A 1 
HETATM 4 C C4' BNG . . . C 3 11.779 -21.799 37.783 1 51.09 ? C4' BNG 501 A 1 
HETATM 5 C C5' BNG . . . C 3 12.652 -20.549 37.727 1 46.79 ? C5' BNG 501 A 1 
HETATM 6 C C6' BNG . . . C 3 13.868 -20.779 36.832 1 46.28 ? C6' BNG 501 A 1 
HETATM 7 C C7' BNG . . . C 3 14.696 -19.51 36.632 1 43.91 ? C7' BNG 501 A 1 
HETATM 8 C C8' BNG . . . C 3 16.149 -19.848 36.373 1 40.23 ? C8' BNG 501 A 1 
#
_model_server_stats.io_time_ms              6 
_model_server_stats.parse_time_ms           6 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           274 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           8 
#