data_2XPA # _model_server_result.job_id 6jYD_mIaLp_TWUynaDoTOQ _model_server_result.datetime_utc '2024-10-10 01:25:10' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2xpa # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":1165}' # _entry.id 2XPA # _exptl.entry_id 2XPA _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 302.285 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '4-[(2-amino-2-oxoethyl)(methyl)carbamoyl]-2-phenyl-1H-imidazole-5-carboxylic acid' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 2XPA _cell.length_a 68.367 _cell.length_b 68.367 _cell.length_c 79.351 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2XPA _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C14 H14 N4 O4' _chem_comp.formula_weight 302.285 _chem_comp.id 4G5 _chem_comp.mon_nstd_flag . _chem_comp.name '4-[(2-amino-2-oxoethyl)(methyl)carbamoyl]-2-phenyl-1H-imidazole-5-carboxylic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C10 C11 4G5 sing 87 n y C10 C9 4G5 doub 88 n y C11 C12 4G5 doub 89 n y C12 C13 4G5 sing 90 n y C13 C14 4G5 doub 91 n y C14 C9 4G5 sing 92 n y C9 C5 4G5 sing 93 n y C5 N1 4G5 doub 94 n y C5 N4 4G5 sing 95 n y N1 C2 4G5 sing 96 n y N4 C3 4G5 sing 97 n y C3 C15 4G5 sing 98 n n C3 C2 4G5 doub 99 n y C15 O17 4G5 sing 100 n n C15 O16 4G5 doub 101 n n C2 C6 4G5 sing 102 n n C6 O8 4G5 doub 103 n n C6 N7 4G5 sing 104 n n N7 C22 4G5 sing 105 n n N7 C18 4G5 sing 106 n n C18 C19 4G5 sing 107 n n C19 O21 4G5 doub 108 n n C19 N20 4G5 sing 109 n n C10 H10 4G5 sing 110 n n C11 H11 4G5 sing 111 n n C12 H12 4G5 sing 112 n n C13 H13 4G5 sing 113 n n C14 H14 4G5 sing 114 n n N4 H4 4G5 sing 115 n n O17 H17 4G5 sing 116 n n C22 H221 4G5 sing 117 n n C22 H222 4G5 sing 118 n n C22 H223 4G5 sing 119 n n C18 H181 4G5 sing 120 n n C18 H182 4G5 sing 121 n n N20 H201 4G5 sing 122 n n N20 H202 4G5 sing 123 n n # _atom_sites.entry_id 2XPA _atom_sites.fract_transf_matrix[1][1] 0.014627 _atom_sites.fract_transf_matrix[1][2] 0.008445 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01689 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012602 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 12P A 1 1164 1164 12P 12P . C 3 4G5 A 1 1165 1165 4G5 4G5 . D 4 HOH A 1 2001 2001 HOH HOH . D 4 HOH A 2 2002 2002 HOH HOH . D 4 HOH A 3 2003 2003 HOH HOH . D 4 HOH A 4 2004 2004 HOH HOH . D 4 HOH A 5 2005 2005 HOH HOH . D 4 HOH A 6 2006 2006 HOH HOH . D 4 HOH A 7 2007 2007 HOH HOH . D 4 HOH A 8 2008 2008 HOH HOH . D 4 HOH A 9 2009 2009 HOH HOH . D 4 HOH A 10 2010 2010 HOH HOH . D 4 HOH A 11 2011 2011 HOH HOH . D 4 HOH A 12 2012 2012 HOH HOH . D 4 HOH A 13 2013 2013 HOH HOH . D 4 HOH A 14 2014 2014 HOH HOH . D 4 HOH A 15 2015 2015 HOH HOH . D 4 HOH A 16 2016 2016 HOH HOH . D 4 HOH A 17 2017 2017 HOH HOH . D 4 HOH A 18 2018 2018 HOH HOH . D 4 HOH A 19 2019 2019 HOH HOH . D 4 HOH A 20 2020 2020 HOH HOH . D 4 HOH A 21 2021 2021 HOH HOH . D 4 HOH A 22 2022 2022 HOH HOH . D 4 HOH A 23 2023 2023 HOH HOH . D 4 HOH A 24 2024 2024 HOH HOH . D 4 HOH A 25 2025 2025 HOH HOH . D 4 HOH A 26 2026 2026 HOH HOH . D 4 HOH A 27 2027 2027 HOH HOH . D 4 HOH A 28 2028 2028 HOH HOH . D 4 HOH A 29 2029 2029 HOH HOH . D 4 HOH A 30 2030 2030 HOH HOH . D 4 HOH A 31 2031 2031 HOH HOH . D 4 HOH A 32 2032 2032 HOH HOH . D 4 HOH A 33 2033 2033 HOH HOH . D 4 HOH A 34 2034 2034 HOH HOH . D 4 HOH A 35 2035 2035 HOH HOH . D 4 HOH A 36 2036 2036 HOH HOH . D 4 HOH A 37 2037 2037 HOH HOH . D 4 HOH A 38 2038 2038 HOH HOH . D 4 HOH A 39 2039 2039 HOH HOH . D 4 HOH A 40 2040 2040 HOH HOH . D 4 HOH A 41 2041 2041 HOH HOH . D 4 HOH A 42 2042 2042 HOH HOH . D 4 HOH A 43 2043 2043 HOH HOH . D 4 HOH A 44 2044 2044 HOH HOH . D 4 HOH A 45 2045 2045 HOH HOH . D 4 HOH A 46 2046 2046 HOH HOH . D 4 HOH A 47 2047 2047 HOH HOH . D 4 HOH A 48 2048 2048 HOH HOH . D 4 HOH A 49 2049 2049 HOH HOH . D 4 HOH A 50 2050 2050 HOH HOH . D 4 HOH A 51 2051 2051 HOH HOH . D 4 HOH A 52 2052 2052 HOH HOH . D 4 HOH A 53 2053 2053 HOH HOH . D 4 HOH A 54 2054 2054 HOH HOH . D 4 HOH A 55 2055 2055 HOH HOH . D 4 HOH A 56 2056 2056 HOH HOH . D 4 HOH A 57 2057 2057 HOH HOH . D 4 HOH A 58 2058 2058 HOH HOH . D 4 HOH A 59 2059 2059 HOH HOH . D 4 HOH A 60 2060 2060 HOH HOH . D 4 HOH A 61 2061 2061 HOH HOH . D 4 HOH A 62 2062 2062 HOH HOH . D 4 HOH A 63 2063 2063 HOH HOH . D 4 HOH A 64 2064 2064 HOH HOH . D 4 HOH A 65 2065 2065 HOH HOH . D 4 HOH A 66 2066 2066 HOH HOH . D 4 HOH A 67 2067 2067 HOH HOH . D 4 HOH A 68 2068 2068 HOH HOH . D 4 HOH A 69 2069 2069 HOH HOH . D 4 HOH A 70 2070 2070 HOH HOH . D 4 HOH A 71 2071 2071 HOH HOH . D 4 HOH A 72 2072 2072 HOH HOH . D 4 HOH A 73 2073 2073 HOH HOH . D 4 HOH A 74 2074 2074 HOH HOH . D 4 HOH A 75 2075 2075 HOH HOH . D 4 HOH A 76 2076 2076 HOH HOH . D 4 HOH A 77 2077 2077 HOH HOH . D 4 HOH A 78 2078 2078 HOH HOH . D 4 HOH A 79 2079 2079 HOH HOH . D 4 HOH A 80 2080 2080 HOH HOH . D 4 HOH A 81 2081 2081 HOH HOH . D 4 HOH A 82 2082 2082 HOH HOH . D 4 HOH A 83 2083 2083 HOH HOH . D 4 HOH A 84 2084 2084 HOH HOH . D 4 HOH A 85 2085 2085 HOH HOH . D 4 HOH A 86 2086 2086 HOH HOH . D 4 HOH A 87 2087 2087 HOH HOH . D 4 HOH A 88 2088 2088 HOH HOH . D 4 HOH A 89 2089 2089 HOH HOH . D 4 HOH A 90 2090 2090 HOH HOH . D 4 HOH A 91 2091 2091 HOH HOH . D 4 HOH A 92 2092 2092 HOH HOH . D 4 HOH A 93 2093 2093 HOH HOH . D 4 HOH A 94 2094 2094 HOH HOH . D 4 HOH A 95 2095 2095 HOH HOH . D 4 HOH A 96 2096 2096 HOH HOH . D 4 HOH A 97 2097 2097 HOH HOH . D 4 HOH A 98 2098 2098 HOH HOH . D 4 HOH A 99 2099 2099 HOH HOH . D 4 HOH A 100 2100 2100 HOH HOH . D 4 HOH A 101 2101 2101 HOH HOH . D 4 HOH A 102 2102 2102 HOH HOH . D 4 HOH A 103 2103 2103 HOH HOH . D 4 HOH A 104 2104 2104 HOH HOH . D 4 HOH A 105 2105 2105 HOH HOH . D 4 HOH A 106 2106 2106 HOH HOH . D 4 HOH A 107 2107 2107 HOH HOH . D 4 HOH A 108 2108 2108 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C10 4G5 . . . C 3 39.011 -17.867 10.252 1 50.88 ? C10 4G5 1165 A 1 HETATM 2 C C11 4G5 . . . C 3 38.963 -19.259 10.34 1 51.67 ? C11 4G5 1165 A 1 HETATM 3 C C12 4G5 . . . C 3 38.908 -19.896 11.587 1 50.2 ? C12 4G5 1165 A 1 HETATM 4 C C13 4G5 . . . C 3 38.901 -19.12 12.748 1 51.41 ? C13 4G5 1165 A 1 HETATM 5 C C14 4G5 . . . C 3 38.931 -17.718 12.666 1 50.58 ? C14 4G5 1165 A 1 HETATM 6 C C9 4G5 . . . C 3 38.955 -17.092 11.42 1 51.75 ? C9 4G5 1165 A 1 HETATM 7 C C5 4G5 . . . C 3 39.04 -15.7 11.342 1 53.29 ? C5 4G5 1165 A 1 HETATM 8 N N1 4G5 . . . C 3 39.608 -14.995 12.324 1 53.94 ? N1 4G5 1165 A 1 HETATM 9 N N4 4G5 . . . C 3 38.675 -14.852 10.34 1 54.73 ? N4 4G5 1165 A 1 HETATM 10 C C3 4G5 . . . C 3 39.011 -13.604 10.733 1 54.26 ? C3 4G5 1165 A 1 HETATM 11 C C15 4G5 . . . C 3 38.802 -12.297 9.931 1 53.33 ? C15 4G5 1165 A 1 HETATM 12 O O17 4G5 . . . C 3 38.533 -12.328 8.711 1 48.46 ? O17 4G5 1165 A 1 HETATM 13 O O16 4G5 . . . C 3 38.985 -11.215 10.515 1 51.6 ? O16 4G5 1165 A 1 HETATM 14 C C2 4G5 . . . C 3 39.614 -13.711 11.993 1 55.52 ? C2 4G5 1165 A 1 HETATM 15 C C6 4G5 . . . C 3 40.225 -12.68 12.98 1 60.08 ? C6 4G5 1165 A 1 HETATM 16 O O8 4G5 . . . C 3 39.483 -11.921 13.597 1 58.88 ? O8 4G5 1165 A 1 HETATM 17 N N7 4G5 . . . C 3 41.565 -12.772 13.215 1 65.27 ? N7 4G5 1165 A 1 HETATM 18 C C22 4G5 . . . C 3 42.373 -13.743 12.411 1 64.33 ? C22 4G5 1165 A 1 HETATM 19 C C18 4G5 . . . C 3 42.2 -11.907 14.24 1 69.69 ? C18 4G5 1165 A 1 HETATM 20 C C19 4G5 . . . C 3 42.66 -12.783 15.47 1 73.63 ? C19 4G5 1165 A 1 HETATM 21 O O21 4G5 . . . C 3 42.021 -13.766 15.886 1 72.53 ? O21 4G5 1165 A 1 HETATM 22 N N20 4G5 . . . C 3 43.808 -12.378 16.035 1 75.33 ? N20 4G5 1165 A 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 297 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 22 #