data_2XPB # _model_server_result.job_id OvbjF-qWgKybLVZZs6J4jA _model_server_result.datetime_utc '2024-11-24 09:21:53' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2xpb # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":1165}' # _entry.id 2XPB # _exptl.entry_id 2XPB _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 369.802 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '5-[BENZYL(METHYL)CARBAMOYL]-2-(3-CHLOROPHENYL)-1H-IMIDAZOLE-4-CARBOXYLIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 2XPB _cell.length_a 68.668 _cell.length_b 68.668 _cell.length_c 79.477 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2XPB _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C19 H16 Cl N3 O3' _chem_comp.formula_weight 369.802 _chem_comp.id 4GE _chem_comp.mon_nstd_flag . _chem_comp.name '5-[BENZYL(METHYL)CARBAMOYL]-2-(3-CHLOROPHENYL)-1H-IMIDAZOLE-4-CARBOXYLIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C5 C6 4GE sing 87 n y C5 C4 4GE doub 88 n y C6 CL1 4GE sing 89 n n C6 C1 4GE doub 90 n y C1 C2 4GE sing 91 n y C2 C3 4GE doub 92 n y C3 C4 4GE sing 93 n y C4 C7 4GE sing 94 n y C7 N8 4GE sing 95 n y C7 N11 4GE doub 96 n y N8 C9 4GE sing 97 n y N11 C10 4GE sing 98 n y C10 C13 4GE sing 99 n n C10 C9 4GE doub 100 n y C13 O15 4GE doub 101 n n C13 O14 4GE sing 102 n n C9 C16 4GE sing 103 n n C16 O18 4GE doub 104 n n C16 N17 4GE sing 105 n n N17 C21 4GE sing 106 n n N17 C19 4GE sing 107 n n C19 C20 4GE sing 108 n n C20 C22 4GE sing 109 n y C20 C26 4GE doub 110 n y C22 C23 4GE doub 111 n y C23 C24 4GE sing 112 n y C24 C25 4GE doub 113 n y C25 C26 4GE sing 114 n y C5 H5 4GE sing 115 n n C1 H1 4GE sing 116 n n C2 H2 4GE sing 117 n n C3 H3 4GE sing 118 n n N8 H8 4GE sing 119 n n O14 H14 4GE sing 120 n n C21 H211 4GE sing 121 n n C21 H212 4GE sing 122 n n C21 H213 4GE sing 123 n n C19 H191 4GE sing 124 n n C19 H192 4GE sing 125 n n C22 H22 4GE sing 126 n n C26 H26 4GE sing 127 n n C23 H23 4GE sing 128 n n C24 H24 4GE sing 129 n n C25 H25 4GE sing 130 n n # _atom_sites.entry_id 2XPB _atom_sites.fract_transf_matrix[1][1] 0.014563 _atom_sites.fract_transf_matrix[1][2] 0.008408 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016816 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012582 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 12P A 1 1164 1164 12P 12P . C 3 4GE A 1 1165 1165 4GE 4GE . D 4 HOH A 1 2001 2001 HOH HOH . D 4 HOH A 2 2002 2002 HOH HOH . D 4 HOH A 3 2003 2003 HOH HOH . D 4 HOH A 4 2004 2004 HOH HOH . D 4 HOH A 5 2005 2005 HOH HOH . D 4 HOH A 6 2006 2006 HOH HOH . D 4 HOH A 7 2007 2007 HOH HOH . D 4 HOH A 8 2008 2008 HOH HOH . D 4 HOH A 9 2009 2009 HOH HOH . D 4 HOH A 10 2010 2010 HOH HOH . D 4 HOH A 11 2011 2011 HOH HOH . D 4 HOH A 12 2012 2012 HOH HOH . D 4 HOH A 13 2013 2013 HOH HOH . D 4 HOH A 14 2014 2014 HOH HOH . D 4 HOH A 15 2015 2015 HOH HOH . D 4 HOH A 16 2016 2016 HOH HOH . D 4 HOH A 17 2017 2017 HOH HOH . D 4 HOH A 18 2018 2018 HOH HOH . D 4 HOH A 19 2019 2019 HOH HOH . D 4 HOH A 20 2020 2020 HOH HOH . D 4 HOH A 21 2021 2021 HOH HOH . D 4 HOH A 22 2022 2022 HOH HOH . D 4 HOH A 23 2023 2023 HOH HOH . D 4 HOH A 24 2024 2024 HOH HOH . D 4 HOH A 25 2025 2025 HOH HOH . D 4 HOH A 26 2026 2026 HOH HOH . D 4 HOH A 27 2027 2027 HOH HOH . D 4 HOH A 28 2028 2028 HOH HOH . D 4 HOH A 29 2029 2029 HOH HOH . D 4 HOH A 30 2030 2030 HOH HOH . D 4 HOH A 31 2031 2031 HOH HOH . D 4 HOH A 32 2032 2032 HOH HOH . D 4 HOH A 33 2033 2033 HOH HOH . D 4 HOH A 34 2034 2034 HOH HOH . D 4 HOH A 35 2035 2035 HOH HOH . D 4 HOH A 36 2036 2036 HOH HOH . D 4 HOH A 37 2037 2037 HOH HOH . D 4 HOH A 38 2038 2038 HOH HOH . D 4 HOH A 39 2039 2039 HOH HOH . D 4 HOH A 40 2040 2040 HOH HOH . D 4 HOH A 41 2041 2041 HOH HOH . D 4 HOH A 42 2042 2042 HOH HOH . D 4 HOH A 43 2043 2043 HOH HOH . D 4 HOH A 44 2044 2044 HOH HOH . D 4 HOH A 45 2045 2045 HOH HOH . D 4 HOH A 46 2046 2046 HOH HOH . D 4 HOH A 47 2047 2047 HOH HOH . D 4 HOH A 48 2048 2048 HOH HOH . D 4 HOH A 49 2049 2049 HOH HOH . D 4 HOH A 50 2050 2050 HOH HOH . D 4 HOH A 51 2051 2051 HOH HOH . D 4 HOH A 52 2052 2052 HOH HOH . D 4 HOH A 53 2053 2053 HOH HOH . D 4 HOH A 54 2054 2054 HOH HOH . D 4 HOH A 55 2055 2055 HOH HOH . D 4 HOH A 56 2056 2056 HOH HOH . D 4 HOH A 57 2057 2057 HOH HOH . D 4 HOH A 58 2058 2058 HOH HOH . D 4 HOH A 59 2059 2059 HOH HOH . D 4 HOH A 60 2060 2060 HOH HOH . D 4 HOH A 61 2061 2061 HOH HOH . D 4 HOH A 62 2062 2062 HOH HOH . D 4 HOH A 63 2063 2063 HOH HOH . D 4 HOH A 64 2064 2064 HOH HOH . D 4 HOH A 65 2065 2065 HOH HOH . D 4 HOH A 66 2066 2066 HOH HOH . D 4 HOH A 67 2067 2067 HOH HOH . D 4 HOH A 68 2068 2068 HOH HOH . D 4 HOH A 69 2069 2069 HOH HOH . D 4 HOH A 70 2070 2070 HOH HOH . D 4 HOH A 71 2071 2071 HOH HOH . D 4 HOH A 72 2072 2072 HOH HOH . D 4 HOH A 73 2073 2073 HOH HOH . D 4 HOH A 74 2074 2074 HOH HOH . D 4 HOH A 75 2075 2075 HOH HOH . D 4 HOH A 76 2076 2076 HOH HOH . D 4 HOH A 77 2077 2077 HOH HOH . D 4 HOH A 78 2078 2078 HOH HOH . D 4 HOH A 79 2079 2079 HOH HOH . D 4 HOH A 80 2080 2080 HOH HOH . D 4 HOH A 81 2081 2081 HOH HOH . D 4 HOH A 82 2082 2082 HOH HOH . D 4 HOH A 83 2083 2083 HOH HOH . D 4 HOH A 84 2084 2084 HOH HOH . D 4 HOH A 85 2085 2085 HOH HOH . D 4 HOH A 86 2086 2086 HOH HOH . D 4 HOH A 87 2087 2087 HOH HOH . D 4 HOH A 88 2088 2088 HOH HOH . D 4 HOH A 89 2089 2089 HOH HOH . D 4 HOH A 90 2090 2090 HOH HOH . D 4 HOH A 91 2091 2091 HOH HOH . D 4 HOH A 92 2092 2092 HOH HOH . D 4 HOH A 93 2093 2093 HOH HOH . D 4 HOH A 94 2094 2094 HOH HOH . D 4 HOH A 95 2095 2095 HOH HOH . D 4 HOH A 96 2096 2096 HOH HOH . D 4 HOH A 97 2097 2097 HOH HOH . D 4 HOH A 98 2098 2098 HOH HOH . D 4 HOH A 99 2099 2099 HOH HOH . D 4 HOH A 100 2100 2100 HOH HOH . D 4 HOH A 101 2101 2101 HOH HOH . D 4 HOH A 102 2102 2102 HOH HOH . D 4 HOH A 103 2103 2103 HOH HOH . D 4 HOH A 104 2104 2104 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C5 4GE . . . C 3 39.407 -17.847 12.785 1 38.86 ? C5 4GE 1165 A 1 HETATM 2 C C6 4GE . . . C 3 39.347 -19.238 12.91 1 39.69 ? C6 4GE 1165 A 1 HETATM 3 CL CL1 4GE . . . C 3 39.656 -20.007 14.454 1 41.02 ? CL1 4GE 1165 A 1 HETATM 4 C C1 4GE . . . C 3 39.091 -20.012 11.775 1 36.63 ? C1 4GE 1165 A 1 HETATM 5 C C2 4GE . . . C 3 38.892 -19.397 10.526 1 39.33 ? C2 4GE 1165 A 1 HETATM 6 C C3 4GE . . . C 3 38.951 -18.002 10.438 1 39.03 ? C3 4GE 1165 A 1 HETATM 7 C C4 4GE . . . C 3 39.176 -17.224 11.563 1 38.42 ? C4 4GE 1165 A 1 HETATM 8 C C7 4GE . . . C 3 39.248 -15.842 11.488 1 43.19 ? C7 4GE 1165 A 1 HETATM 9 N N8 4GE . . . C 3 39.783 -15.115 12.482 1 45.37 ? N8 4GE 1165 A 1 HETATM 10 N N11 4GE . . . C 3 38.834 -14.997 10.489 1 42.82 ? N11 4GE 1165 A 1 HETATM 11 C C10 4GE . . . C 3 39.144 -13.738 10.864 1 43.72 ? C10 4GE 1165 A 1 HETATM 12 C C13 4GE . . . C 3 38.866 -12.465 9.988 1 44.54 ? C13 4GE 1165 A 1 HETATM 13 O O15 4GE . . . C 3 38.426 -12.599 8.83 1 38.82 ? O15 4GE 1165 A 1 HETATM 14 O O14 4GE . . . C 3 39.07 -11.32 10.45 1 41.48 ? O14 4GE 1165 A 1 HETATM 15 C C9 4GE . . . C 3 39.739 -13.814 12.138 1 43.89 ? C9 4GE 1165 A 1 HETATM 16 C C16 4GE . . . C 3 40.311 -12.747 13.135 1 45.02 ? C16 4GE 1165 A 1 HETATM 17 O O18 4GE . . . C 3 39.55 -12.073 13.825 1 42.81 ? O18 4GE 1165 A 1 HETATM 18 N N17 4GE . . . C 3 41.654 -12.715 13.311 1 45.8 ? N17 4GE 1165 A 1 HETATM 19 C C21 4GE . . . C 3 42.521 -13.596 12.453 1 41.56 ? C21 4GE 1165 A 1 HETATM 20 C C19 4GE . . . C 3 42.228 -11.812 14.356 1 48.73 ? C19 4GE 1165 A 1 HETATM 21 C C20 4GE . . . C 3 42.965 -12.719 15.392 1 52.13 ? C20 4GE 1165 A 1 HETATM 22 C C22 4GE . . . C 3 42.27 -13.717 16.098 1 52.31 ? C22 4GE 1165 A 1 HETATM 23 C C23 4GE . . . C 3 42.929 -14.54 17.023 1 53.95 ? C23 4GE 1165 A 1 HETATM 24 C C24 4GE . . . C 3 44.301 -14.407 17.249 1 55.11 ? C24 4GE 1165 A 1 HETATM 25 C C25 4GE . . . C 3 45.013 -13.418 16.539 1 56.02 ? C25 4GE 1165 A 1 HETATM 26 C C26 4GE . . . C 3 44.346 -12.582 15.617 1 54.22 ? C26 4GE 1165 A 1 # _model_server_stats.io_time_ms 5 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 224 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 26 #