data_2XQ7 # _model_server_result.job_id 0w_lClaVqYOZo0JGsWD90Q _model_server_result.datetime_utc '2024-10-22 21:46:06' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2xq7 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":1317}' # _entry.id 2XQ7 # _exptl.entry_id 2XQ7 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 112.411 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CADMIUM ION' _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 104.04 _cell.angle_gamma 90 _cell.entry_id 2XQ7 _cell.length_a 183.314 _cell.length_b 128.31 _cell.length_c 164.374 _cell.Z_PDB 20 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2XQ7 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details pentameric _pdbx_struct_assembly.oligomeric_count 5 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 F N N ? 2 G N N ? 2 H N N ? 2 I N N ? 2 J N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OE1 GLU 222 A GLU 221 1_555 F CD CD . A CD 1317 1_555 ? B ? ? ? ? ? ? ? ? ? ? 2.43 ? metalc ? metalc2 A OE2 GLU 222 A GLU 221 1_555 G CD CD . A CD 1318 1_555 ? A ? ? ? ? ? ? ? ? ? ? 2.725 ? metalc ? metalc3 F CD CD . A CD 1317 1_555 B OE1 GLU 222 B GLU 221 1_555 ? ? ? ? B ? ? ? ? ? ? ? 2.891 ? metalc ? metalc4 F CD CD . A CD 1317 1_555 C OE1 GLU 222 C GLU 221 1_555 ? ? ? ? B ? ? ? ? ? ? ? 2.33 ? metalc ? metalc5 F CD CD . A CD 1317 1_555 D OE1 GLU 222 D GLU 221 1_555 ? ? ? ? B ? ? ? ? ? ? ? 2.703 ? metalc ? metalc6 F CD CD . A CD 1317 1_555 E OE1 GLU 222 E GLU 221 1_555 ? ? ? ? B ? ? ? ? ? ? ? 2.414 ? metalc ? metalc7 G CD CD . A CD 1318 1_555 B OE2 GLU 222 B GLU 221 1_555 ? ? ? ? A ? ? ? ? ? ? ? 2.948 ? metalc ? metalc8 G CD CD . A CD 1318 1_555 C OE2 GLU 222 C GLU 221 1_555 ? ? ? ? A ? ? ? ? ? ? ? 2.503 ? metalc ? metalc9 G CD CD . A CD 1318 1_555 D OE2 GLU 222 D GLU 221 1_555 ? ? ? ? A ? ? ? ? ? ? ? 2.849 ? metalc ? metalc10 G CD CD . A CD 1318 1_555 E OE2 GLU 222 E GLU 221 1_555 ? ? ? ? A ? ? ? ? ? ? ? 2.46 ? # _chem_comp.formula 'Cd 2' _chem_comp.formula_weight 112.411 _chem_comp.id CD _chem_comp.mon_nstd_flag . _chem_comp.name 'CADMIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 2XQ7 _atom_sites.fract_transf_matrix[1][1] 0.005455 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001364 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007794 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006271 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code F 2 CD A 1 1317 1317 CD CD . G 2 CD A 1 1318 1318 CD CD . H 2 CD A 1 1319 1319 CD CD . I 2 CD C 1 1317 1317 CD CD . J 2 CD C 1 1318 1318 CD CD . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CD _atom_site.label_atom_id CD _atom_site.label_comp_id CD _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id F _atom_site.label_entity_id 2 _atom_site.Cartn_x 4.929 _atom_site.Cartn_y 3.353 _atom_site.Cartn_z 11.248 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 120.59 _atom_site.pdbx_formal_charge 2 _atom_site.auth_atom_id CD _atom_site.auth_comp_id CD _atom_site.auth_seq_id 1317 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 25 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 13 _model_server_stats.query_time_ms 325 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #