data_2XRU # _model_server_result.job_id iVUaLAnc_eJHTzt9LH1BQA _model_server_result.datetime_utc '2024-11-23 12:20:15' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2xru # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1389}' # _entry.id 2XRU # _exptl.entry_id 2XRU _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 502.631 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 3-({[4-(4-METHYLPIPERAZIN-1-YL)PHENYL]CARBONYL}AMINO)-N-[(1R)-1-PHENYLPROPYL]-1H-THIENO[3,2-C]PYRAZOLE-5-CARBOXAMIDE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 2XRU _cell.length_a 82.467 _cell.length_b 82.467 _cell.length_c 165.453 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2XRU _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 61 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C27 H30 N6 O2 S' _chem_comp.formula_weight 502.631 _chem_comp.id 400 _chem_comp.mon_nstd_flag . _chem_comp.name 3-({[4-(4-METHYLPIPERAZIN-1-YL)PHENYL]CARBONYL}AMINO)-N-[(1R)-1-PHENYLPROPYL]-1H-THIENO[3,2-C]PYRAZOLE-5-CARBOXAMIDE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms PHA-828300 # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 N2 400 doub 1 n y C1 C4 400 sing 2 n y C1 N9 400 sing 3 n n N2 N3 400 sing 4 n y N3 C5 400 sing 5 n y C4 C5 400 doub 6 n y C4 S8 400 sing 7 n y C5 C6 400 sing 8 n y C6 C7 400 doub 9 n y C7 S8 400 sing 10 n y C7 C25 400 sing 11 n n N9 C10 400 sing 12 n n C10 C11 400 sing 13 n n C10 O12 400 doub 14 n n C11 C13 400 sing 15 n y C11 C17 400 doub 16 n y C13 C14 400 doub 17 n y C14 C15 400 sing 18 n y C15 C16 400 doub 19 n y C15 N18 400 sing 20 n n C16 C17 400 sing 21 n y N18 C19 400 sing 22 n n N18 C23 400 sing 23 n n C19 C20 400 sing 24 n n C20 N21 400 sing 25 n n N21 C22 400 sing 26 n n N21 C24 400 sing 27 n n C22 C23 400 sing 28 n n C25 O26 400 doub 29 n n C25 N27 400 sing 30 n n N27 C28 400 sing 31 n n C28 C29 400 sing 32 n n C28 C30 400 sing 33 n n C29 C31 400 sing 34 n y C29 C35 400 doub 35 n y C30 C36 400 sing 36 n n C31 C32 400 doub 37 n y C32 C33 400 sing 38 n y C33 C34 400 doub 39 n y C34 C35 400 sing 40 n y N9 H9 400 sing 41 n n N3 H3 400 sing 42 n n C6 H6 400 sing 43 n n C13 H13 400 sing 44 n n C17 H17 400 sing 45 n n C14 H14 400 sing 46 n n C16 H16 400 sing 47 n n C19 H191 400 sing 48 n n C19 H192 400 sing 49 n n C23 H231 400 sing 50 n n C23 H232 400 sing 51 n n C20 H201 400 sing 52 n n C20 H202 400 sing 53 n n C22 H221 400 sing 54 n n C22 H222 400 sing 55 n n C24 H241 400 sing 56 n n C24 H242 400 sing 57 n n C24 H243 400 sing 58 n n N27 H27 400 sing 59 n n C28 H28 400 sing 60 n n C30 H301 400 sing 61 n n C30 H302 400 sing 62 n n C31 H31 400 sing 63 n n C35 H35 400 sing 64 n n C36 H361 400 sing 65 n n C36 H362 400 sing 66 n n C36 H363 400 sing 67 n n C32 H32 400 sing 68 n n C33 H33 400 sing 69 n n C34 H34 400 sing 70 n n # _atom_sites.entry_id 2XRU _atom_sites.fract_transf_matrix[1][1] 0.012126 _atom_sites.fract_transf_matrix[1][2] 0.007001 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014002 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006044 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # _pdbx_nonpoly_scheme.asym_id B _pdbx_nonpoly_scheme.entity_id 2 _pdbx_nonpoly_scheme.mon_id 400 _pdbx_nonpoly_scheme.pdb_strand_id A _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 1389 _pdbx_nonpoly_scheme.auth_seq_num 1389 _pdbx_nonpoly_scheme.pdb_mon_id 400 _pdbx_nonpoly_scheme.auth_mon_id 400 _pdbx_nonpoly_scheme.pdb_ins_code . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 400 . . . B 2 3.747 31.647 7.932 1 44.1 ? C1 400 1389 A 1 HETATM 2 N N2 400 . . . B 2 3.563 31.95 9.242 1 44.1 ? N2 400 1389 A 1 HETATM 3 N N3 400 . . . B 2 4.381 31.243 10 1 44.1 ? N3 400 1389 A 1 HETATM 4 C C4 400 . . . B 2 4.755 30.678 7.885 1 44.1 ? C4 400 1389 A 1 HETATM 5 C C5 400 . . . B 2 5.137 30.446 9.194 1 44.1 ? C5 400 1389 A 1 HETATM 6 C C6 400 . . . B 2 6.165 29.503 9.318 1 44.1 ? C6 400 1389 A 1 HETATM 7 C C7 400 . . . B 2 6.571 29.016 8.049 1 44.1 ? C7 400 1389 A 1 HETATM 8 S S8 400 . . . B 2 5.642 29.72 6.727 1 44.1 ? S8 400 1389 A 1 HETATM 9 N N9 400 . . . B 2 3.009 32.269 7 1 44.1 ? N9 400 1389 A 1 HETATM 10 C C10 400 . . . B 2 3.183 32.386 5.641 1 44.1 ? C10 400 1389 A 1 HETATM 11 C C11 400 . . . B 2 2.554 33.451 4.855 1 44.1 ? C11 400 1389 A 1 HETATM 12 O O12 400 . . . B 2 3.906 31.514 5.041 1 44.1 ? O12 400 1389 A 1 HETATM 13 C C13 400 . . . B 2 1.611 34.39 5.417 1 44.1 ? C13 400 1389 A 1 HETATM 14 C C14 400 . . . B 2 1.024 35.408 4.62 1 44.1 ? C14 400 1389 A 1 HETATM 15 C C15 400 . . . B 2 1.332 35.562 3.199 1 44.1 ? C15 400 1389 A 1 HETATM 16 C C16 400 . . . B 2 2.267 34.622 2.643 1 44.1 ? C16 400 1389 A 1 HETATM 17 C C17 400 . . . B 2 2.855 33.605 3.441 1 44.1 ? C17 400 1389 A 1 HETATM 18 N N18 400 . . . B 2 0.751 36.581 2.435 1 44.1 ? N18 400 1389 A 1 HETATM 19 C C19 400 . . . B 2 -0.159 36.302 1.254 1 44.1 ? C19 400 1389 A 1 HETATM 20 C C20 400 . . . B 2 -0.035 37.364 0.085 1 44.1 ? C20 400 1389 A 1 HETATM 21 N N21 400 . . . B 2 0.044 38.78 0.677 1 44.1 ? N21 400 1389 A 1 HETATM 22 C C22 400 . . . B 2 1.247 38.878 1.589 1 44.1 ? C22 400 1389 A 1 HETATM 23 C C23 400 . . . B 2 0.974 37.995 2.821 1 44.1 ? C23 400 1389 A 1 HETATM 24 C C24 400 . . . B 2 0.098 39.848 -0.394 1 44.1 ? C24 400 1389 A 1 HETATM 25 C C25 400 . . . B 2 7.638 28.072 7.822 1 44.1 ? C25 400 1389 A 1 HETATM 26 O O26 400 . . . B 2 8.164 27.453 8.784 1 44.1 ? O26 400 1389 A 1 HETATM 27 N N27 400 . . . B 2 8.138 27.858 6.582 1 44.1 ? N27 400 1389 A 1 HETATM 28 C C28 400 . . . B 2 9.277 27.038 6.243 1 44.1 ? C28 400 1389 A 1 HETATM 29 C C29 400 . . . B 2 8.75 25.708 5.753 1 44.1 ? C29 400 1389 A 1 HETATM 30 C C30 400 . . . B 2 10.146 27.823 5.222 1 44.1 ? C30 400 1389 A 1 HETATM 31 C C31 400 . . . B 2 7.512 25.607 4.957 1 44.1 ? C31 400 1389 A 1 HETATM 32 C C32 400 . . . B 2 7.002 24.329 4.499 1 44.1 ? C32 400 1389 A 1 HETATM 33 C C33 400 . . . B 2 7.721 23.128 4.831 1 44.1 ? C33 400 1389 A 1 HETATM 34 C C34 400 . . . B 2 8.946 23.205 5.615 1 44.1 ? C34 400 1389 A 1 HETATM 35 C C35 400 . . . B 2 9.455 24.483 6.07 1 44.1 ? C35 400 1389 A 1 HETATM 36 C C36 400 . . . B 2 11.032 28.919 5.888 1 44.1 ? C36 400 1389 A 1 # _model_server_stats.io_time_ms 60 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 226 _model_server_stats.encode_time_ms 9 _model_server_stats.element_count 36 #