data_2XTB # _model_server_result.job_id jV90q9pLhAb3lEwFrGZDJw _model_server_result.datetime_utc '2025-03-04 16:18:32' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2xtb # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1344}' # _entry.id 2XTB # _exptl.entry_id 2XTB _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 321.373 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 4-[5-(4-PHENOXYPHENYL)-1H-PYRAZOL-3-YL]MORPHOLINE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2XTB _cell.length_a 61.24 _cell.length_b 61.24 _cell.length_c 193.85 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2XTB _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C19 H19 N3 O2' _chem_comp.formula_weight 321.373 _chem_comp.id KRM _chem_comp.mon_nstd_flag . _chem_comp.name 4-[5-(4-PHENOXYPHENYL)-1H-PYRAZOL-3-YL]MORPHOLINE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C24 C23 KRM sing 173 n n C24 N19 KRM sing 174 n n C23 O22 KRM sing 175 n n O22 C21 KRM sing 176 n n C21 C20 KRM sing 177 n n C20 N19 KRM sing 178 n n N19 C16 KRM sing 179 n n C16 C15 KRM sing 180 n y C16 N17 KRM doub 181 n y C15 C14 KRM doub 182 n y N17 N18 KRM sing 183 n y N18 C14 KRM sing 184 n y C14 C11 KRM sing 185 n y C11 C10 KRM sing 186 n y C11 C12 KRM doub 187 n y C10 C9 KRM doub 188 n y C9 C8 KRM sing 189 n y C12 C13 KRM sing 190 n y C13 C8 KRM doub 191 n y C8 O7 KRM sing 192 n n O7 C6 KRM sing 193 n n C6 C1 KRM sing 194 n y C6 C5 KRM doub 195 n y C1 C2 KRM doub 196 n y C5 C4 KRM sing 197 n y C4 C3 KRM doub 198 n y C3 C2 KRM sing 199 n y C24 H241 KRM sing 200 n n C24 H242 KRM sing 201 n n C23 H231 KRM sing 202 n n C23 H232 KRM sing 203 n n C21 H211 KRM sing 204 n n C21 H212 KRM sing 205 n n C20 H201 KRM sing 206 n n C20 H202 KRM sing 207 n n C15 H15 KRM sing 208 n n N18 H18 KRM sing 209 n n C10 H10 KRM sing 210 n n C12 H12 KRM sing 211 n n C9 H9 KRM sing 212 n n C13 H13 KRM sing 213 n n C1 H1 KRM sing 214 n n C5 H5 KRM sing 215 n n C2 H2 KRM sing 216 n n C4 H4 KRM sing 217 n n C3 H3 KRM sing 218 n n # _atom_sites.entry_id 2XTB _atom_sites.fract_transf_matrix[1][1] 0.016329 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016329 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005159 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 KRM A 1 1344 1344 KRM KRM . C 3 HOH A 1 2001 2001 HOH HOH . C 3 HOH A 2 2002 2002 HOH HOH . C 3 HOH A 3 2003 2003 HOH HOH . C 3 HOH A 4 2004 2004 HOH HOH . C 3 HOH A 5 2005 2005 HOH HOH . C 3 HOH A 6 2006 2006 HOH HOH . C 3 HOH A 7 2007 2007 HOH HOH . C 3 HOH A 8 2008 2008 HOH HOH . C 3 HOH A 9 2009 2009 HOH HOH . C 3 HOH A 10 2010 2010 HOH HOH . C 3 HOH A 11 2011 2011 HOH HOH . C 3 HOH A 12 2012 2012 HOH HOH . C 3 HOH A 13 2013 2013 HOH HOH . C 3 HOH A 14 2014 2014 HOH HOH . C 3 HOH A 15 2015 2015 HOH HOH . C 3 HOH A 16 2016 2016 HOH HOH . C 3 HOH A 17 2017 2017 HOH HOH . C 3 HOH A 18 2018 2018 HOH HOH . C 3 HOH A 19 2019 2019 HOH HOH . C 3 HOH A 20 2020 2020 HOH HOH . C 3 HOH A 21 2021 2021 HOH HOH . C 3 HOH A 22 2022 2022 HOH HOH . C 3 HOH A 23 2023 2023 HOH HOH . C 3 HOH A 24 2024 2024 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C24 KRM . . . B 2 13.25 -26.033 4.78 1 40.55 ? C24 KRM 1344 A 1 HETATM 2 C C23 KRM . . . B 2 11.867 -26.61 4.505 1 40.1 ? C23 KRM 1344 A 1 HETATM 3 O O22 KRM . . . B 2 11.919 -27.393 3.313 1 39.71 ? O22 KRM 1344 A 1 HETATM 4 C C21 KRM . . . B 2 12.704 -28.571 3.5 1 40.13 ? C21 KRM 1344 A 1 HETATM 5 C C20 KRM . . . B 2 14.166 -28.2 3.753 1 40.81 ? C20 KRM 1344 A 1 HETATM 6 N N19 KRM . . . B 2 14.232 -27.123 4.752 1 41.39 ? N19 KRM 1344 A 1 HETATM 7 C C16 KRM . . . B 2 15.262 -27.081 5.669 1 41.7 ? C16 KRM 1344 A 1 HETATM 8 C C15 KRM . . . B 2 16.452 -27.786 5.566 1 42.03 ? C15 KRM 1344 A 1 HETATM 9 N N17 KRM . . . B 2 15.197 -26.305 6.748 1 41.96 ? N17 KRM 1344 A 1 HETATM 10 N N18 KRM . . . B 2 16.415 -26.522 7.409 1 42.31 ? N18 KRM 1344 A 1 HETATM 11 C C14 KRM . . . B 2 17.169 -27.407 6.704 1 42.94 ? C14 KRM 1344 A 1 HETATM 12 C C11 KRM . . . B 2 18.532 -27.861 7.122 1 43 ? C11 KRM 1344 A 1 HETATM 13 C C10 KRM . . . B 2 19.306 -28.695 6.31 1 43.25 ? C10 KRM 1344 A 1 HETATM 14 C C9 KRM . . . B 2 20.577 -29.1 6.73 1 43.51 ? C9 KRM 1344 A 1 HETATM 15 C C12 KRM . . . B 2 19.042 -27.435 8.351 1 43.3 ? C12 KRM 1344 A 1 HETATM 16 C C13 KRM . . . B 2 20.31 -27.839 8.77 1 43.58 ? C13 KRM 1344 A 1 HETATM 17 C C8 KRM . . . B 2 21.084 -28.676 7.965 1 43.72 ? C8 KRM 1344 A 1 HETATM 18 O O7 KRM . . . B 2 22.334 -29.05 8.412 1 44.46 ? O7 KRM 1344 A 1 HETATM 19 C C6 KRM . . . B 2 22.995 -30.193 8.012 1 45.57 ? C6 KRM 1344 A 1 HETATM 20 C C1 KRM . . . B 2 24.047 -30.106 7.094 1 45.88 ? C1 KRM 1344 A 1 HETATM 21 C C5 KRM . . . B 2 22.635 -31.441 8.529 1 45.85 ? C5 KRM 1344 A 1 HETATM 22 C C4 KRM . . . B 2 23.316 -32.593 8.12 1 46.08 ? C4 KRM 1344 A 1 HETATM 23 C C3 KRM . . . B 2 24.361 -32.503 7.198 1 45.76 ? C3 KRM 1344 A 1 HETATM 24 C C2 KRM . . . B 2 24.728 -31.257 6.684 1 46.03 ? C2 KRM 1344 A 1 # _model_server_stats.io_time_ms 0 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 572 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 24 #