data_2XUO
#
_model_server_result.job_id            xRhct_P1lL01gZ0rLSIjmw 
_model_server_result.datetime_utc      '2024-10-14 18:27:28' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2xuo 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":1543}' 
#
_entry.id    2XUO 
#
_exptl.entry_id    2XUO 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              661.86 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            3,8-DIAMINO-6-PHENYL-5-[6-[1-[2-[(1,2,3,4-TETRAHYDRO-9-ACRIDINYL)AMINO]ETHYL]-1H-1,2,3-TRIAZOL-4-YL]HEXYL]-PHENANTHRIDINIUM 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            2XUO 
_cell.length_a            78.907 
_cell.length_b            110.411 
_cell.length_c            227.565 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 2XUO 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 D N N 
? 3 E N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 69 A CYS 69 1_555 A SG CYS 96 A CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? 
disulf ? disulf2 A SG CYS 257 A CYS 257 1_555 A SG CYS 272 A CYS 272 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.1 ? 
disulf ? disulf3 A SG CYS 409 A CYS 409 1_555 A SG CYS 529 A CYS 529 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.085 ? 
disulf ? disulf4 B SG CYS 69 B CYS 69 1_555 B SG CYS 96 B CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.059 ? 
disulf ? disulf5 B SG CYS 257 B CYS 257 1_555 B SG CYS 272 B CYS 272 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.079 ? 
disulf ? disulf6 B SG CYS 409 B CYS 409 1_555 B SG CYS 529 B CYS 529 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.051 ? 
#
_chem_comp.formula           'C42 H45 N8 1' 
_chem_comp.formula_weight    661.86 
_chem_comp.id                TZ4 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              3,8-DIAMINO-6-PHENYL-5-[6-[1-[2-[(1,2,3,4-TETRAHYDRO-9-ACRIDINYL)AMINO]ETHYL]-1H-1,2,3-TRIAZOL-4-YL]HEXYL]-PHENANTHRIDINIUM 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N3 C19 TZ4 sing 402 n n 
N3 HN31 TZ4 sing 403 n n 
N3 HN32 TZ4 sing 404 n n 
C19 C18 TZ4 doub 405 n y 
C19 C15 TZ4 sing 406 n y 
C18 C17 TZ4 sing 407 n y 
C18 H18 TZ4 sing 408 n n 
C17 C16 TZ4 doub 409 n y 
C17 H17 TZ4 sing 410 n n 
C16 C14 TZ4 sing 411 n y 
C16 C4 TZ4 sing 412 n y 
C14 C15 TZ4 doub 413 n y 
C14 C7 TZ4 sing 414 n y 
C15 H15 TZ4 sing 415 n n 
C7 C8 TZ4 sing 416 n y 
C7 N2 TZ4 doub 417 n y 
C8 C9 TZ4 doub 418 n y 
C8 C13 TZ4 sing 419 n y 
C9 C10 TZ4 sing 420 n y 
C9 H9 TZ4 sing 421 n n 
C10 C11 TZ4 doub 422 n y 
C10 H10 TZ4 sing 423 n n 
C11 C12 TZ4 sing 424 n y 
C11 H11 TZ4 sing 425 n n 
C12 C13 TZ4 doub 426 n y 
C12 H12 TZ4 sing 427 n n 
C13 H13 TZ4 sing 428 n n 
C4 C3 TZ4 doub 429 n y 
C4 C6 TZ4 sing 430 n y 
C3 C2 TZ4 sing 431 n y 
C3 H3 TZ4 sing 432 n n 
C2 C1 TZ4 doub 433 n y 
C2 H2 TZ4 sing 434 n n 
C1 N1 TZ4 sing 435 n n 
C1 C5 TZ4 sing 436 n y 
N1 HN11 TZ4 sing 437 n n 
N1 HN12 TZ4 sing 438 n n 
C6 C5 TZ4 doub 439 n y 
C6 N2 TZ4 sing 440 n y 
C5 H5 TZ4 sing 441 n n 
N2 C20 TZ4 sing 442 n n 
C20 C21 TZ4 sing 443 n n 
C20 H201 TZ4 sing 444 n n 
C20 H202 TZ4 sing 445 n n 
C21 C22 TZ4 sing 446 n n 
C21 H211 TZ4 sing 447 n n 
C21 H212 TZ4 sing 448 n n 
C22 C23 TZ4 sing 449 n n 
C22 H221 TZ4 sing 450 n n 
C22 H222 TZ4 sing 451 n n 
C23 C24 TZ4 sing 452 n n 
C23 H231 TZ4 sing 453 n n 
C23 H232 TZ4 sing 454 n n 
C24 C25 TZ4 sing 455 n n 
C24 H241 TZ4 sing 456 n n 
C24 H242 TZ4 sing 457 n n 
C25 C26 TZ4 sing 458 n n 
C25 H251 TZ4 sing 459 n n 
C25 H252 TZ4 sing 460 n n 
C26 N4 TZ4 sing 461 n y 
C26 C27 TZ4 doub 462 n y 
N4 N5 TZ4 doub 463 n y 
N5 N6 TZ4 sing 464 n y 
N6 C27 TZ4 sing 465 n y 
N6 C28 TZ4 sing 466 n n 
C27 H27 TZ4 sing 467 n n 
C28 C29 TZ4 sing 468 n n 
C28 H281 TZ4 sing 469 n n 
C28 H282 TZ4 sing 470 n n 
C29 N7 TZ4 sing 471 n n 
C29 H291 TZ4 sing 472 n n 
C29 H292 TZ4 sing 473 n n 
N7 C30 TZ4 sing 474 n n 
N7 HN7 TZ4 sing 475 n n 
C30 C31 TZ4 doub 476 n y 
C30 C39 TZ4 sing 477 n y 
C31 C32 TZ4 sing 478 n y 
C31 C33 TZ4 sing 479 n y 
C32 C36 TZ4 doub 480 n y 
C32 H32 TZ4 sing 481 n n 
C33 C34 TZ4 sing 482 n y 
C33 N8 TZ4 doub 483 n y 
C34 C35 TZ4 doub 484 n y 
C34 H34 TZ4 sing 485 n n 
C35 C36 TZ4 sing 486 n y 
C35 H35 TZ4 sing 487 n n 
C36 H36 TZ4 sing 488 n n 
N8 C37 TZ4 sing 489 n y 
C37 C38 TZ4 sing 490 n n 
C37 C39 TZ4 doub 491 n y 
C38 C42 TZ4 sing 492 n n 
C38 H381 TZ4 sing 493 n n 
C38 H382 TZ4 sing 494 n n 
C39 C40 TZ4 sing 495 n n 
C40 C41 TZ4 sing 496 n n 
C40 H401 TZ4 sing 497 n n 
C40 H402 TZ4 sing 498 n n 
C41 C42 TZ4 sing 499 n n 
C41 H411 TZ4 sing 500 n n 
C41 H412 TZ4 sing 501 n n 
C42 H421 TZ4 sing 502 n n 
C42 H422 TZ4 sing 503 n n 
#
_atom_sites.entry_id                     2XUO 
_atom_sites.fract_transf_matrix[1][1]    0.012673 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.009057 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.004394 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 P6G A 1 1542 1542 P6G P6G . 
D 3 TZ4 A 1 1543 1543 TZ4 TZ4 . 
E 3 TZ4 B 1 1542 1542 TZ4 TZ4 . 
F 4 HOH A 1 2001 2001 HOH HOH . 
F 4 HOH A 2 2002 2002 HOH HOH . 
F 4 HOH A 3 2003 2003 HOH HOH . 
F 4 HOH A 4 2004 2004 HOH HOH . 
F 4 HOH A 5 2005 2005 HOH HOH . 
F 4 HOH A 6 2006 2006 HOH HOH . 
F 4 HOH A 7 2007 2007 HOH HOH . 
F 4 HOH A 8 2008 2008 HOH HOH . 
F 4 HOH A 9 2009 2009 HOH HOH . 
F 4 HOH A 10 2010 2010 HOH HOH . 
F 4 HOH A 11 2011 2011 HOH HOH . 
F 4 HOH A 12 2012 2012 HOH HOH . 
F 4 HOH A 13 2013 2013 HOH HOH . 
F 4 HOH A 14 2014 2014 HOH HOH . 
F 4 HOH A 15 2015 2015 HOH HOH . 
F 4 HOH A 16 2016 2016 HOH HOH . 
F 4 HOH A 17 2017 2017 HOH HOH . 
F 4 HOH A 18 2018 2018 HOH HOH . 
F 4 HOH A 19 2019 2019 HOH HOH . 
F 4 HOH A 20 2020 2020 HOH HOH . 
F 4 HOH A 21 2021 2021 HOH HOH . 
F 4 HOH A 22 2022 2022 HOH HOH . 
F 4 HOH A 23 2023 2023 HOH HOH . 
F 4 HOH A 24 2024 2024 HOH HOH . 
G 4 HOH B 1 2001 2001 HOH HOH . 
G 4 HOH B 2 2002 2002 HOH HOH . 
G 4 HOH B 3 2003 2003 HOH HOH . 
G 4 HOH B 4 2004 2004 HOH HOH . 
G 4 HOH B 5 2005 2005 HOH HOH . 
G 4 HOH B 6 2006 2006 HOH HOH . 
G 4 HOH B 7 2007 2007 HOH HOH . 
G 4 HOH B 8 2008 2008 HOH HOH . 
G 4 HOH B 9 2009 2009 HOH HOH . 
G 4 HOH B 10 2010 2010 HOH HOH . 
G 4 HOH B 11 2011 2011 HOH HOH . 
G 4 HOH B 12 2012 2012 HOH HOH . 
G 4 HOH B 13 2013 2013 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N3 TZ4 . . . D 3 40.352 29.534 7.888 1 77.47 ? N3 TZ4 1543 A 1 
HETATM 2 C C19 TZ4 . . . D 3 40.226 28.289 8.492 1 79.97 ? C19 TZ4 1543 A 1 
HETATM 3 C C18 TZ4 . . . D 3 41.186 27.738 9.409 1 79.42 ? C18 TZ4 1543 A 1 
HETATM 4 C C17 TZ4 . . . D 3 40.973 26.488 9.969 1 78.13 ? C17 TZ4 1543 A 1 
HETATM 5 C C16 TZ4 . . . D 3 39.82 25.662 9.686 1 78.56 ? C16 TZ4 1543 A 1 
HETATM 6 C C14 TZ4 . . . D 3 38.855 26.229 8.782 1 79.29 ? C14 TZ4 1543 A 1 
HETATM 7 C C15 TZ4 . . . D 3 39.112 27.525 8.2 1 80.26 ? C15 TZ4 1543 A 1 
HETATM 8 C C7 TZ4 . . . D 3 37.545 25.666 8.648 1 78.55 ? C7 TZ4 1543 A 1 
HETATM 9 C C8 TZ4 . . . D 3 36.615 26.37 7.68 1 81.18 ? C8 TZ4 1543 A 1 
HETATM 10 C C9 TZ4 . . . D 3 35.799 27.423 8.164 1 82.06 ? C9 TZ4 1543 A 1 
HETATM 11 C C10 TZ4 . . . D 3 34.95 28.11 7.284 1 82.46 ? C10 TZ4 1543 A 1 
HETATM 12 C C11 TZ4 . . . D 3 34.921 27.747 5.925 1 82.9 ? C11 TZ4 1543 A 1 
HETATM 13 C C12 TZ4 . . . D 3 35.739 26.713 5.431 1 82.21 ? C12 TZ4 1543 A 1 
HETATM 14 C C13 TZ4 . . . D 3 36.589 26.026 6.305 1 82.09 ? C13 TZ4 1543 A 1 
HETATM 15 C C4 TZ4 . . . D 3 39.449 24.47 10.459 1 77.59 ? C4 TZ4 1543 A 1 
HETATM 16 C C3 TZ4 . . . D 3 40.454 23.638 11.074 1 75.66 ? C3 TZ4 1543 A 1 
HETATM 17 C C2 TZ4 . . . D 3 40.256 22.323 11.408 1 74.78 ? C2 TZ4 1543 A 1 
HETATM 18 C C1 TZ4 . . . D 3 38.994 21.728 11.18 1 75.21 ? C1 TZ4 1543 A 1 
HETATM 19 N N1 TZ4 . . . D 3 38.789 20.401 11.505 1 75.6 ? N1 TZ4 1543 A 1 
HETATM 20 C C6 TZ4 . . . D 3 38.133 23.886 10.259 1 76.93 ? C6 TZ4 1543 A 1 
HETATM 21 C C5 TZ4 . . . D 3 37.974 22.5 10.614 1 76.03 ? C5 TZ4 1543 A 1 
HETATM 22 N N2 TZ4 . . . D 3 37.231 24.547 9.367 1 75.36 ? N2 TZ4 1543 A 1 
HETATM 23 C C20 TZ4 . . . D 3 35.858 23.967 9.242 1 70.99 ? C20 TZ4 1543 A 1 
HETATM 24 C C21 TZ4 . . . D 3 35.491 22.99 8.113 1 66.14 ? C21 TZ4 1543 A 1 
HETATM 25 C C22 TZ4 . . . D 3 34.477 21.928 8.575 1 59.79 ? C22 TZ4 1543 A 1 
HETATM 26 C C23 TZ4 . . . D 3 33.317 22.552 9.342 1 55.09 ? C23 TZ4 1543 A 1 
HETATM 27 C C24 TZ4 . . . D 3 32.032 21.728 9.387 1 51.91 ? C24 TZ4 1543 A 1 
HETATM 28 C C25 TZ4 . . . D 3 30.977 22.508 10.174 1 48.44 ? C25 TZ4 1543 A 1 
HETATM 29 C C26 TZ4 . . . D 3 29.714 21.743 10.404 1 47.11 ? C26 TZ4 1543 A 1 
HETATM 30 N N4 TZ4 . . . D 3 29.687 20.624 11.113 1 45.59 ? N4 TZ4 1543 A 1 
HETATM 31 N N5 TZ4 . . . D 3 28.438 20.243 11.122 1 44.92 ? N5 TZ4 1543 A 1 
HETATM 32 N N6 TZ4 . . . D 3 27.678 21.086 10.447 1 46.09 ? N6 TZ4 1543 A 1 
HETATM 33 C C27 TZ4 . . . D 3 28.447 22.075 9.954 1 47.97 ? C27 TZ4 1543 A 1 
HETATM 34 C C28 TZ4 . . . D 3 26.222 21.067 10.211 1 46.27 ? C28 TZ4 1543 A 1 
HETATM 35 C C29 TZ4 . . . D 3 25.416 22.024 11.132 1 45.1 ? C29 TZ4 1543 A 1 
HETATM 36 N N7 TZ4 . . . D 3 25.381 21.606 12.554 1 45.45 ? N7 TZ4 1543 A 1 
HETATM 37 C C30 TZ4 . . . D 3 26.554 21.571 13.302 1 44.41 ? C30 TZ4 1543 A 1 
HETATM 38 C C31 TZ4 . . . D 3 26.771 20.441 14.149 1 43.45 ? C31 TZ4 1543 A 1 
HETATM 39 C C32 TZ4 . . . D 3 25.875 19.305 14.23 1 43.89 ? C32 TZ4 1543 A 1 
HETATM 40 C C33 TZ4 . . . D 3 27.994 20.376 14.918 1 44.8 ? C33 TZ4 1543 A 1 
HETATM 41 C C34 TZ4 . . . D 3 28.289 19.207 15.744 1 44.33 ? C34 TZ4 1543 A 1 
HETATM 42 C C35 TZ4 . . . D 3 27.406 18.152 15.783 1 43.7 ? C35 TZ4 1543 A 1 
HETATM 43 C C36 TZ4 . . . D 3 26.186 18.204 15.018 1 44.2 ? C36 TZ4 1543 A 1 
HETATM 44 N N8 TZ4 . . . D 3 28.955 21.34 14.847 1 43.99 ? N8 TZ4 1543 A 1 
HETATM 45 C C37 TZ4 . . . D 3 28.764 22.391 14.021 1 44.31 ? C37 TZ4 1543 A 1 
HETATM 46 C C38 TZ4 . . . D 3 29.759 23.43 14.045 1 44.97 ? C38 TZ4 1543 A 1 
HETATM 47 C C39 TZ4 . . . D 3 27.554 22.578 13.271 1 44.49 ? C39 TZ4 1543 A 1 
HETATM 48 C C40 TZ4 . . . D 3 27.349 23.872 12.655 1 42.95 ? C40 TZ4 1543 A 1 
HETATM 49 C C41 TZ4 . . . D 3 28.318 24.834 12.72 1 44.23 ? C41 TZ4 1543 A 1 
HETATM 50 C C42 TZ4 . . . D 3 29.63 24.519 13.211 1 44.24 ? C42 TZ4 1543 A 1 
#
_model_server_stats.io_time_ms              22 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    7 
_model_server_stats.query_time_ms           298 
_model_server_stats.encode_time_ms          9 
_model_server_stats.element_count           50 
#