data_2XV4 # _model_server_result.job_id IBuMWns2uU6V65mn2EEnuw _model_server_result.datetime_utc '2025-02-05 17:02:19' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2xv4 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":1535}' # _entry.id 2XV4 # _exptl.entry_id 2XV4 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 94.971 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHATE ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 112.84 _cell.angle_gamma 90 _cell.entry_id 2XV4 _cell.length_a 162.54 _cell.length_b 69.92 _cell.length_c 75.97 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2XV4 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N # _chem_comp.formula 'O4 P -3' _chem_comp.formula_weight 94.971 _chem_comp.id PO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1 PO4 doub 260 n n P O2 PO4 sing 261 n n P O3 PO4 sing 262 n n P O4 PO4 sing 263 n n # _atom_sites.entry_id 2XV4 _atom_sites.fract_transf_matrix[1][1] 0.006152 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002591 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014302 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014283 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PO4 S 1 1533 1533 PO4 PO4 . C 2 PO4 S 1 1534 1534 PO4 PO4 . D 2 PO4 S 1 1535 1535 PO4 PO4 . E 3 HOH S 1 2001 2001 HOH HOH . E 3 HOH S 2 2002 2002 HOH HOH . E 3 HOH S 3 2003 2003 HOH HOH . E 3 HOH S 4 2004 2004 HOH HOH . E 3 HOH S 5 2005 2005 HOH HOH . E 3 HOH S 6 2006 2006 HOH HOH . E 3 HOH S 7 2007 2007 HOH HOH . E 3 HOH S 8 2008 2008 HOH HOH . E 3 HOH S 9 2009 2009 HOH HOH . E 3 HOH S 10 2010 2010 HOH HOH . E 3 HOH S 11 2011 2011 HOH HOH . E 3 HOH S 12 2012 2012 HOH HOH . E 3 HOH S 13 2013 2013 HOH HOH . E 3 HOH S 14 2014 2014 HOH HOH . E 3 HOH S 15 2015 2015 HOH HOH . E 3 HOH S 16 2016 2016 HOH HOH . E 3 HOH S 17 2017 2017 HOH HOH . E 3 HOH S 18 2018 2018 HOH HOH . E 3 HOH S 19 2019 2019 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P PO4 . . . D 2 43.11 -5.1 25.375 1 103.58 ? P PO4 1535 S 1 HETATM 2 O O1 PO4 . . . D 2 44.029 -4.429 24.242 1 109.41 ? O1 PO4 1535 S 1 HETATM 3 O O2 PO4 . . . D 2 41.65 -4.434 25.505 1 109.62 ? O2 PO4 1535 S 1 HETATM 4 O O3 PO4 . . . D 2 42.833 -6.544 24.824 1 112.41 ? O3 PO4 1535 S 1 HETATM 5 O O4 PO4 . . . D 2 43.877 -5.18 26.775 1 106.06 ? O4 PO4 1535 S 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 255 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 5 #