data_2XVJ # _model_server_result.job_id rGq5bS4Q0rtFRCHy0aqWOA _model_server_result.datetime_utc '2024-10-18 02:25:42' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2xvj # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":1448}' # _entry.id 2XVJ # _exptl.entry_id 2XVJ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.005 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'NITRATE ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90.62 _cell.angle_gamma 90 _cell.entry_id 2XVJ _cell.length_a 159.117 _cell.length_b 67.85 _cell.length_c 138.899 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2XVJ _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,D,E,F,G,H,I,J,K,L,Q,R 1 1 C,M,N,O,P,S 2 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -x,y,-z -1 0 0 0 1 0 0 0 -1 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 I N N ? 3 N N N # _chem_comp.formula 'N O3 -1' _chem_comp.formula_weight 62.005 _chem_comp.id NO3 _chem_comp.mon_nstd_flag . _chem_comp.name 'NITRATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N O1 NO3 doub 370 n n N O2 NO3 sing 371 n n N O3 NO3 sing 372 n n # _atom_sites.entry_id 2XVJ _atom_sites.fract_transf_matrix[1][1] 0.006285 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000068 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014738 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.0072 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 FAD A 1 1448 1448 FAD FAD . E 3 NO3 A 1 1449 1449 NO3 NO3 . F 4 IND A 1 1450 1450 IND IND . G 5 OXY A 1 1451 1451 OXY OXY . H 2 FAD B 1 1447 1447 FAD FAD . I 3 NO3 B 1 1448 1448 NO3 NO3 . J 4 IND B 1 1449 1449 IND IND . K 6 MES B 1 1450 1450 MES MES . L 5 OXY B 1 1451 1451 OXY OXY . M 2 FAD C 1 1448 1448 FAD FAD . N 3 NO3 C 1 1449 1449 NO3 NO3 . O 4 IND C 1 1450 1450 IND IND . P 5 OXY C 1 1451 1451 OXY OXY . Q 7 HOH A 1 2001 2001 HOH HOH . Q 7 HOH A 2 2002 2002 HOH HOH . Q 7 HOH A 3 2003 2003 HOH HOH . Q 7 HOH A 4 2004 2004 HOH HOH . Q 7 HOH A 5 2005 2005 HOH HOH . Q 7 HOH A 6 2006 2006 HOH HOH . Q 7 HOH A 7 2007 2007 HOH HOH . Q 7 HOH A 8 2008 2008 HOH HOH . Q 7 HOH A 9 2009 2009 HOH HOH . Q 7 HOH A 10 2010 2010 HOH HOH . Q 7 HOH A 11 2011 2011 HOH HOH . Q 7 HOH A 12 2012 2012 HOH HOH . Q 7 HOH A 13 2013 2013 HOH HOH . Q 7 HOH A 14 2014 2014 HOH HOH . Q 7 HOH A 15 2015 2015 HOH HOH . Q 7 HOH A 16 2016 2016 HOH HOH . Q 7 HOH A 17 2017 2017 HOH HOH . Q 7 HOH A 18 2018 2018 HOH HOH . Q 7 HOH A 19 2019 2019 HOH HOH . Q 7 HOH A 20 2020 2020 HOH HOH . Q 7 HOH A 21 2021 2021 HOH HOH . Q 7 HOH A 22 2022 2022 HOH HOH . Q 7 HOH A 23 2023 2023 HOH HOH . Q 7 HOH A 24 2024 2024 HOH HOH . Q 7 HOH A 25 2025 2025 HOH HOH . Q 7 HOH A 26 2026 2026 HOH HOH . Q 7 HOH A 27 2027 2027 HOH HOH . Q 7 HOH A 28 2028 2028 HOH HOH . Q 7 HOH A 29 2029 2029 HOH HOH . Q 7 HOH A 30 2030 2030 HOH HOH . Q 7 HOH A 31 2031 2031 HOH HOH . Q 7 HOH A 32 2032 2032 HOH HOH . R 7 HOH B 1 2001 2001 HOH HOH . R 7 HOH B 2 2002 2002 HOH HOH . R 7 HOH B 3 2003 2003 HOH HOH . R 7 HOH B 4 2004 2004 HOH HOH . R 7 HOH B 5 2005 2005 HOH HOH . R 7 HOH B 6 2006 2006 HOH HOH . R 7 HOH B 7 2007 2007 HOH HOH . R 7 HOH B 8 2008 2008 HOH HOH . R 7 HOH B 9 2009 2009 HOH HOH . R 7 HOH B 10 2010 2010 HOH HOH . R 7 HOH B 11 2011 2011 HOH HOH . R 7 HOH B 12 2012 2012 HOH HOH . R 7 HOH B 13 2013 2013 HOH HOH . R 7 HOH B 14 2014 2014 HOH HOH . R 7 HOH B 15 2015 2015 HOH HOH . R 7 HOH B 16 2016 2016 HOH HOH . R 7 HOH B 17 2017 2017 HOH HOH . R 7 HOH B 18 2018 2018 HOH HOH . R 7 HOH B 19 2019 2019 HOH HOH . R 7 HOH B 20 2020 2020 HOH HOH . R 7 HOH B 21 2021 2021 HOH HOH . R 7 HOH B 22 2022 2022 HOH HOH . R 7 HOH B 23 2023 2023 HOH HOH . R 7 HOH B 24 2024 2024 HOH HOH . R 7 HOH B 25 2025 2025 HOH HOH . R 7 HOH B 26 2026 2026 HOH HOH . R 7 HOH B 27 2027 2027 HOH HOH . R 7 HOH B 28 2028 2028 HOH HOH . R 7 HOH B 29 2029 2029 HOH HOH . R 7 HOH B 30 2030 2030 HOH HOH . R 7 HOH B 31 2031 2031 HOH HOH . R 7 HOH B 32 2032 2032 HOH HOH . R 7 HOH B 33 2033 2033 HOH HOH . R 7 HOH B 34 2034 2034 HOH HOH . R 7 HOH B 35 2035 2035 HOH HOH . R 7 HOH B 36 2036 2036 HOH HOH . R 7 HOH B 37 2037 2037 HOH HOH . R 7 HOH B 38 2038 2038 HOH HOH . R 7 HOH B 39 2039 2039 HOH HOH . R 7 HOH B 40 2040 2040 HOH HOH . R 7 HOH B 41 2041 2041 HOH HOH . R 7 HOH B 42 2042 2042 HOH HOH . R 7 HOH B 43 2043 2043 HOH HOH . R 7 HOH B 44 2044 2044 HOH HOH . R 7 HOH B 45 2045 2045 HOH HOH . R 7 HOH B 46 2046 2046 HOH HOH . R 7 HOH B 47 2047 2047 HOH HOH . R 7 HOH B 48 2048 2048 HOH HOH . R 7 HOH B 49 2049 2049 HOH HOH . R 7 HOH B 50 2050 2050 HOH HOH . R 7 HOH B 51 2051 2051 HOH HOH . R 7 HOH B 52 2052 2052 HOH HOH . R 7 HOH B 53 2053 2053 HOH HOH . R 7 HOH B 54 2054 2054 HOH HOH . S 7 HOH C 1 2001 2001 HOH HOH . S 7 HOH C 2 2002 2002 HOH HOH . S 7 HOH C 3 2003 2003 HOH HOH . S 7 HOH C 4 2004 2004 HOH HOH . S 7 HOH C 5 2005 2005 HOH HOH . S 7 HOH C 6 2006 2006 HOH HOH . S 7 HOH C 7 2007 2007 HOH HOH . S 7 HOH C 8 2008 2008 HOH HOH . S 7 HOH C 9 2009 2009 HOH HOH . S 7 HOH C 10 2010 2010 HOH HOH . S 7 HOH C 11 2011 2011 HOH HOH . S 7 HOH C 12 2012 2012 HOH HOH . S 7 HOH C 13 2013 2013 HOH HOH . S 7 HOH C 14 2014 2014 HOH HOH . S 7 HOH C 15 2015 2015 HOH HOH . S 7 HOH C 16 2016 2016 HOH HOH . S 7 HOH C 17 2017 2017 HOH HOH . S 7 HOH C 18 2018 2018 HOH HOH . S 7 HOH C 19 2019 2019 HOH HOH . S 7 HOH C 20 2020 2020 HOH HOH . S 7 HOH C 21 2021 2021 HOH HOH . S 7 HOH C 22 2022 2022 HOH HOH . S 7 HOH C 23 2023 2023 HOH HOH . S 7 HOH C 24 2024 2024 HOH HOH . S 7 HOH C 25 2025 2025 HOH HOH . S 7 HOH C 26 2026 2026 HOH HOH . S 7 HOH C 27 2027 2027 HOH HOH . S 7 HOH C 28 2028 2028 HOH HOH . S 7 HOH C 29 2029 2029 HOH HOH . S 7 HOH C 30 2030 2030 HOH HOH . S 7 HOH C 31 2031 2031 HOH HOH . S 7 HOH C 32 2032 2032 HOH HOH . S 7 HOH C 33 2033 2033 HOH HOH . S 7 HOH C 34 2034 2034 HOH HOH . S 7 HOH C 35 2035 2035 HOH HOH . S 7 HOH C 36 2036 2036 HOH HOH . S 7 HOH C 37 2037 2037 HOH HOH . S 7 HOH C 38 2038 2038 HOH HOH . S 7 HOH C 39 2039 2039 HOH HOH . S 7 HOH C 40 2040 2040 HOH HOH . S 7 HOH C 41 2041 2041 HOH HOH . S 7 HOH C 42 2042 2042 HOH HOH . S 7 HOH C 43 2043 2043 HOH HOH . S 7 HOH C 44 2044 2044 HOH HOH . S 7 HOH C 45 2045 2045 HOH HOH . S 7 HOH C 46 2046 2046 HOH HOH . S 7 HOH C 47 2047 2047 HOH HOH . S 7 HOH C 48 2048 2048 HOH HOH . S 7 HOH C 49 2049 2049 HOH HOH . S 7 HOH C 50 2050 2050 HOH HOH . S 7 HOH C 51 2051 2051 HOH HOH . S 7 HOH C 52 2052 2052 HOH HOH . S 7 HOH C 53 2053 2053 HOH HOH . S 7 HOH C 54 2054 2054 HOH HOH . S 7 HOH C 55 2055 2055 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N NO3 . . . I 3 -5.181 -30.055 53.087 1 72.01 ? N NO3 1448 B 1 HETATM 2 O O1 NO3 . . . I 3 -5.638 -29.565 51.925 1 72.49 ? O1 NO3 1448 B 1 HETATM 3 O O2 NO3 . . . I 3 -4.081 -29.516 53.64 1 72.05 ? O2 NO3 1448 B 1 HETATM 4 O O3 NO3 . . . I 3 -5.871 -31.055 53.697 1 71.82 ? O3 NO3 1448 B 1 # _model_server_stats.io_time_ms 24 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 13 _model_server_stats.query_time_ms 318 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 4 #