data_2XXY # _model_server_result.job_id 7FFfc7V-MXxWjAKsrQLPSg _model_server_result.datetime_utc '2024-11-24 09:54:01' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2xxy # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":900}' # _entry.id 2XXY # _exptl.entry_id 2XXY _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 213.23 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 3-(CARBOXYMETHYL)-4-ISOPROPENYLPROLINE _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2XXY _cell.length_a 85.665 _cell.length_b 99.442 _cell.length_c 124.627 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2XXY _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,E,F 1 1 C,D,G,H 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 F N N ? 2 G N N ? 2 H N N # _chem_comp.formula 'C10 H15 N O4' _chem_comp.formula_weight 213.23 _chem_comp.id KAI _chem_comp.mon_nstd_flag . _chem_comp.name 3-(CARBOXYMETHYL)-4-ISOPROPENYLPROLINE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms KAINATE # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N CD KAI sing 171 n n N CA KAI sing 172 n n N HN1 KAI sing 173 n n CD CG KAI sing 174 n n CD HD1 KAI sing 175 n n CD HD2 KAI sing 176 n n CD1 CG2 KAI doub 177 n n CD1 HD11 KAI sing 178 n n CD1 HD12 KAI sing 179 n n CD2 CG2 KAI sing 180 n n CD2 HD21 KAI sing 181 n n CD2 HD22 KAI sing 182 n n CD2 HD23 KAI sing 183 n n CA CB KAI sing 184 n n CA C KAI sing 185 n n CA HA KAI sing 186 n n CB CB1 KAI sing 187 n n CB CG KAI sing 188 n n CB HB KAI sing 189 n n CB1 CG1 KAI sing 190 n n CB1 HB11 KAI sing 191 n n CB1 HB12 KAI sing 192 n n CG CG2 KAI sing 193 n n CG HG KAI sing 194 n n CG1 OD1 KAI sing 195 n n CG1 OD2 KAI doub 196 n n C O KAI doub 197 n n C OXT KAI sing 198 n n OD1 HOD1 KAI sing 199 n n OXT HXT KAI sing 200 n n # _atom_sites.entry_id 2XXY _atom_sites.fract_transf_matrix[1][1] 0.011673 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010056 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008024 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 KAI A 1 900 900 KAI KAI . F 2 KAI B 1 900 900 KAI KAI . G 2 KAI C 1 900 900 KAI KAI . H 2 KAI D 1 900 900 KAI KAI . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N KAI . . . G 2 -50.788 8.146 6.243 1 35.86 ? N KAI 900 C 1 HETATM 2 C CD KAI . . . G 2 -51.467 8.748 7.412 1 36.75 ? CD KAI 900 C 1 HETATM 3 C CD1 KAI . . . G 2 -52.03 10.595 9.392 1 39.74 ? CD1 KAI 900 C 1 HETATM 4 C CD2 KAI . . . G 2 -50.075 9.865 10.776 1 40.87 ? CD2 KAI 900 C 1 HETATM 5 C CA KAI . . . G 2 -49.372 7.995 6.571 1 34.99 ? CA KAI 900 C 1 HETATM 6 C CB KAI . . . G 2 -49.1 8.885 7.774 1 37.55 ? CB KAI 900 C 1 HETATM 7 C CB1 KAI . . . G 2 -48.82 10.334 7.393 1 41.1 ? CB1 KAI 900 C 1 HETATM 8 C CG KAI . . . G 2 -50.416 8.87 8.508 1 37.3 ? CG KAI 900 C 1 HETATM 9 C CG1 KAI . . . G 2 -47.439 10.607 6.852 1 39.05 ? CG1 KAI 900 C 1 HETATM 10 C CG2 KAI . . . G 2 -50.588 10.111 9.368 1 40.13 ? CG2 KAI 900 C 1 HETATM 11 C C KAI . . . G 2 -49.15 6.545 6.901 1 36.6 ? C KAI 900 C 1 HETATM 12 O O KAI . . . G 2 -49.865 5.656 6.416 1 35 ? O KAI 900 C 1 HETATM 13 O OD1 KAI . . . G 2 -47.327 11.597 6.092 1 37.72 ? OD1 KAI 900 C 1 HETATM 14 O OD2 KAI . . . G 2 -46.475 9.88 7.204 1 41.18 ? OD2 KAI 900 C 1 HETATM 15 O OXT KAI . . . G 2 -48.248 6.209 7.677 1 39.19 ? OXT KAI 900 C 1 # _model_server_stats.io_time_ms 20 _model_server_stats.parse_time_ms 22 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 282 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 15 #