data_2XYJ
#
_model_server_result.job_id            51ZaJFKc5ULabgiQs53eAQ 
_model_server_result.datetime_utc      '2024-12-26 10:16:35' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2xyj 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":1443}' 
#
_entry.id    2XYJ 
#
_exptl.entry_id    2XYJ 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              238.278 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'PENTAETHYLENE GLYCOL' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          95.71 
_cell.angle_gamma         90 
_cell.entry_id            2XYJ 
_cell.length_a            37.749 
_cell.length_b            112.009 
_cell.length_c            152.573 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 2XYJ 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA monomeric 1 author_and_software_defined_assembly 1 
PISA monomeric 1 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,E,H 1 1 
B,F,G,I 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             E 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C10 H22 O6' 
_chem_comp.formula_weight    238.278 
_chem_comp.id                1PE 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'PENTAETHYLENE GLYCOL' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     PEG400 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
OH2 C12 1PE sing 1 n n 
OH2 HO2 1PE sing 2 n n 
C12 C22 1PE sing 3 n n 
C12 H121 1PE sing 4 n n 
C12 H122 1PE sing 5 n n 
C22 OH3 1PE sing 6 n n 
C22 H221 1PE sing 7 n n 
C22 H222 1PE sing 8 n n 
OH3 C23 1PE sing 9 n n 
C13 C23 1PE sing 10 n n 
C13 OH4 1PE sing 11 n n 
C13 H131 1PE sing 12 n n 
C13 H132 1PE sing 13 n n 
C23 H231 1PE sing 14 n n 
C23 H232 1PE sing 15 n n 
OH4 C24 1PE sing 16 n n 
C14 C24 1PE sing 17 n n 
C14 OH5 1PE sing 18 n n 
C14 H141 1PE sing 19 n n 
C14 H142 1PE sing 20 n n 
C24 H241 1PE sing 21 n n 
C24 H242 1PE sing 22 n n 
OH5 C25 1PE sing 23 n n 
C15 C25 1PE sing 24 n n 
C15 OH6 1PE sing 25 n n 
C15 H151 1PE sing 26 n n 
C15 H152 1PE sing 27 n n 
C25 H251 1PE sing 28 n n 
C25 H252 1PE sing 29 n n 
OH6 C26 1PE sing 30 n n 
C16 C26 1PE sing 31 n n 
C16 OH7 1PE sing 32 n n 
C16 H161 1PE sing 33 n n 
C16 H162 1PE sing 34 n n 
C26 H261 1PE sing 35 n n 
C26 H262 1PE sing 36 n n 
OH7 HO7 1PE sing 37 n n 
#
_atom_sites.entry_id                     2XYJ 
_atom_sites.fract_transf_matrix[1][1]    0.026491 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.002649 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.008928 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.006587 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 WLM A 1 1441 1441 WLM WLM . 
D 2 WLM A 1 1442 1442 WLM WLM . 
E 3 1PE A 1 1443 1443 1PE 1PE . 
F 2 WLM B 1 1441 1441 WLM WLM . 
G 2 WLM B 1 1442 1442 WLM WLM . 
H 4 HOH A 1 2001 2001 HOH HOH . 
H 4 HOH A 2 2002 2002 HOH HOH . 
H 4 HOH A 3 2003 2003 HOH HOH . 
H 4 HOH A 4 2004 2004 HOH HOH . 
H 4 HOH A 5 2005 2005 HOH HOH . 
H 4 HOH A 6 2006 2006 HOH HOH . 
H 4 HOH A 7 2007 2007 HOH HOH . 
H 4 HOH A 8 2008 2008 HOH HOH . 
H 4 HOH A 9 2009 2009 HOH HOH . 
H 4 HOH A 10 2010 2010 HOH HOH . 
H 4 HOH A 11 2011 2011 HOH HOH . 
H 4 HOH A 12 2012 2012 HOH HOH . 
H 4 HOH A 13 2013 2013 HOH HOH . 
H 4 HOH A 14 2014 2014 HOH HOH . 
H 4 HOH A 15 2015 2015 HOH HOH . 
H 4 HOH A 16 2016 2016 HOH HOH . 
H 4 HOH A 17 2017 2017 HOH HOH . 
H 4 HOH A 18 2018 2018 HOH HOH . 
H 4 HOH A 19 2019 2019 HOH HOH . 
H 4 HOH A 20 2020 2020 HOH HOH . 
H 4 HOH A 21 2021 2021 HOH HOH . 
H 4 HOH A 22 2022 2022 HOH HOH . 
H 4 HOH A 23 2023 2023 HOH HOH . 
H 4 HOH A 24 2024 2024 HOH HOH . 
H 4 HOH A 25 2025 2025 HOH HOH . 
H 4 HOH A 26 2026 2026 HOH HOH . 
H 4 HOH A 27 2027 2027 HOH HOH . 
H 4 HOH A 28 2028 2028 HOH HOH . 
H 4 HOH A 29 2029 2029 HOH HOH . 
H 4 HOH A 30 2030 2030 HOH HOH . 
H 4 HOH A 31 2031 2031 HOH HOH . 
H 4 HOH A 32 2032 2032 HOH HOH . 
H 4 HOH A 33 2033 2033 HOH HOH . 
H 4 HOH A 34 2034 2034 HOH HOH . 
H 4 HOH A 35 2035 2035 HOH HOH . 
H 4 HOH A 36 2036 2036 HOH HOH . 
H 4 HOH A 37 2037 2037 HOH HOH . 
H 4 HOH A 38 2038 2038 HOH HOH . 
H 4 HOH A 39 2039 2039 HOH HOH . 
H 4 HOH A 40 2040 2040 HOH HOH . 
H 4 HOH A 41 2041 2041 HOH HOH . 
H 4 HOH A 42 2042 2042 HOH HOH . 
H 4 HOH A 43 2043 2043 HOH HOH . 
H 4 HOH A 44 2044 2044 HOH HOH . 
H 4 HOH A 45 2045 2045 HOH HOH . 
H 4 HOH A 46 2046 2046 HOH HOH . 
H 4 HOH A 47 2047 2047 HOH HOH . 
H 4 HOH A 48 2048 2048 HOH HOH . 
H 4 HOH A 49 2049 2049 HOH HOH . 
H 4 HOH A 50 2050 2050 HOH HOH . 
H 4 HOH A 51 2051 2051 HOH HOH . 
H 4 HOH A 52 2052 2052 HOH HOH . 
H 4 HOH A 53 2053 2053 HOH HOH . 
H 4 HOH A 54 2054 2054 HOH HOH . 
H 4 HOH A 55 2055 2055 HOH HOH . 
H 4 HOH A 56 2056 2056 HOH HOH . 
H 4 HOH A 57 2057 2057 HOH HOH . 
H 4 HOH A 58 2058 2058 HOH HOH . 
H 4 HOH A 59 2059 2059 HOH HOH . 
H 4 HOH A 60 2060 2060 HOH HOH . 
H 4 HOH A 61 2061 2061 HOH HOH . 
H 4 HOH A 62 2062 2062 HOH HOH . 
H 4 HOH A 63 2063 2063 HOH HOH . 
H 4 HOH A 64 2064 2064 HOH HOH . 
H 4 HOH A 65 2065 2065 HOH HOH . 
H 4 HOH A 66 2066 2066 HOH HOH . 
I 4 HOH B 1 2001 2001 HOH HOH . 
I 4 HOH B 2 2002 2002 HOH HOH . 
I 4 HOH B 3 2003 2003 HOH HOH . 
I 4 HOH B 4 2004 2004 HOH HOH . 
I 4 HOH B 5 2005 2005 HOH HOH . 
I 4 HOH B 6 2006 2006 HOH HOH . 
I 4 HOH B 7 2007 2007 HOH HOH . 
I 4 HOH B 8 2008 2008 HOH HOH . 
I 4 HOH B 9 2009 2009 HOH HOH . 
I 4 HOH B 10 2010 2010 HOH HOH . 
I 4 HOH B 11 2011 2011 HOH HOH . 
I 4 HOH B 12 2012 2012 HOH HOH . 
I 4 HOH B 13 2013 2013 HOH HOH . 
I 4 HOH B 14 2014 2014 HOH HOH . 
I 4 HOH B 15 2015 2015 HOH HOH . 
I 4 HOH B 16 2016 2016 HOH HOH . 
I 4 HOH B 17 2017 2017 HOH HOH . 
I 4 HOH B 18 2018 2018 HOH HOH . 
I 4 HOH B 19 2019 2019 HOH HOH . 
I 4 HOH B 20 2020 2020 HOH HOH . 
I 4 HOH B 21 2021 2021 HOH HOH . 
I 4 HOH B 22 2022 2022 HOH HOH . 
I 4 HOH B 23 2023 2023 HOH HOH . 
I 4 HOH B 24 2024 2024 HOH HOH . 
I 4 HOH B 25 2025 2025 HOH HOH . 
I 4 HOH B 26 2026 2026 HOH HOH . 
I 4 HOH B 27 2027 2027 HOH HOH . 
I 4 HOH B 28 2028 2028 HOH HOH . 
I 4 HOH B 29 2029 2029 HOH HOH . 
I 4 HOH B 30 2030 2030 HOH HOH . 
I 4 HOH B 31 2031 2031 HOH HOH . 
I 4 HOH B 32 2032 2032 HOH HOH . 
I 4 HOH B 33 2033 2033 HOH HOH . 
I 4 HOH B 34 2034 2034 HOH HOH . 
I 4 HOH B 35 2035 2035 HOH HOH . 
I 4 HOH B 36 2036 2036 HOH HOH . 
I 4 HOH B 37 2037 2037 HOH HOH . 
I 4 HOH B 38 2038 2038 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 O OH2 1PE . . . E 3 12.809 26.739 43.988 1 71.35 ? OH2 1PE 1443 A 1 
HETATM 2 C C12 1PE . . . E 3 14.169 26.903 44.395 1 72.14 ? C12 1PE 1443 A 1 
HETATM 3 C C22 1PE . . . E 3 15.142 26.305 43.403 1 71.88 ? C22 1PE 1443 A 1 
HETATM 4 O OH3 1PE . . . E 3 16.276 25.719 44.018 1 72.37 ? OH3 1PE 1443 A 1 
HETATM 5 C C13 1PE . . . E 3 16.059 23.401 43.304 1 72.74 ? C13 1PE 1443 A 1 
HETATM 6 C C23 1PE . . . E 3 16.823 24.708 43.17 1 72 ? C23 1PE 1443 A 1 
HETATM 7 O OH4 1PE . . . E 3 14.958 23.521 44.185 1 73.23 ? OH4 1PE 1443 A 1 
HETATM 8 C C14 1PE . . . E 3 13.728 21.695 43.049 1 69.48 ? C14 1PE 1443 A 1 
HETATM 9 C C24 1PE . . . E 3 14.312 22.259 44.338 1 71.28 ? C24 1PE 1443 A 1 
HETATM 10 O OH5 1PE . . . E 3 12.578 20.903 43.344 1 66.95 ? OH5 1PE 1443 A 1 
HETATM 11 C C15 1PE . . . E 3 11.772 21.037 41.023 1 65.56 ? C15 1PE 1443 A 1 
HETATM 12 C C25 1PE . . . E 3 12.098 20.187 42.211 1 64.08 ? C25 1PE 1443 A 1 
HETATM 13 O OH6 1PE . . . E 3 10.538 21.678 41.202 1 67.78 ? OH6 1PE 1443 A 1 
HETATM 14 C C16 1PE . . . E 3 11.421 22.306 39.061 1 69.19 ? C16 1PE 1443 A 1 
HETATM 15 C C26 1PE . . . E 3 10.281 22.454 40.052 1 68.43 ? C26 1PE 1443 A 1 
HETATM 16 O OH7 1PE . . . E 3 11.186 23.073 37.901 1 70.75 ? OH7 1PE 1443 A 1 
#
_model_server_stats.io_time_ms              7 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    25 
_model_server_stats.query_time_ms           368 
_model_server_stats.encode_time_ms          6 
_model_server_stats.element_count           16 
#