data_2XZ0 # _model_server_result.job_id Hjj-FYWAduGVcRo2BrgGbQ _model_server_result.datetime_utc '2024-10-19 09:35:04' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2xz0 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"M","auth_seq_id":1365}' # _entry.id 2XZ0 # _exptl.entry_id 2XZ0 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 55.845 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FE (III) ION' _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 2XZ0 _cell.length_a 188.274 _cell.length_b 188.274 _cell.length_c 81.315 _cell.Z_PDB 18 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2XZ0 _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 31 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA trimeric 3 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression C,L,M,N,Q 1 1,2 A,B,D,E,F,G,H,I,J,K,O,P 2 1 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 6_555 -x,-x+y,-z+1/3 -0.5 -0.866025 0 -0.866025 0.5 0 0 0 -1 0 0 27.105 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 F N N ? 3 H N N ? 3 I N N ? 3 L N N ? 3 M N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 D C ASP 37 D ASP 37 1_555 D N SEP 38 D SEP 38 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale2 D C SEP 38 D SEP 38 1_555 D N LEU 39 D LEU 39 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? metalc ? metalc1 A OE2 GLU 105 A GLU 105 1_555 E FE FE . A FE 1364 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.333 ? metalc ? metalc2 A OE1 GLU 105 A GLU 105 1_555 E FE FE . A FE 1364 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.414 ? metalc ? metalc3 A OE2 GLU 106 A GLU 106 1_555 G ZN ZN . A ZN 1366 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.59 ? metalc ? metalc4 A OE1 GLU 143 A GLU 143 1_555 E FE FE . A FE 1364 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.996 ? metalc ? metalc5 A OE2 GLU 143 A GLU 143 1_555 F FE FE . A FE 1365 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.004 ? metalc ? metalc6 A ND1 HIS 146 A HIS 146 1_555 E FE FE . A FE 1364 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.437 ? metalc ? metalc7 A OE1 GLU 196 A GLU 196 1_555 F FE FE . A FE 1365 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.318 ? metalc ? metalc8 A OE2 GLU 196 A GLU 196 1_555 F FE FE . A FE 1365 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.4 ? metalc ? metalc9 A OE2 GLU 229 A GLU 229 1_555 E FE FE . A FE 1364 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.215 ? metalc ? metalc10 A OE1 GLU 229 A GLU 229 1_555 F FE FE . A FE 1365 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.195 ? metalc ? metalc11 E FE FE . A FE 1364 1_555 F FE FE . A FE 1365 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.038 ? metalc ? metalc12 F FE FE . A FE 1365 1_555 O O HOH . A HOH 2009 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.511 ? metalc ? metalc13 B OE2 GLU 105 B GLU 105 1_555 H FE FE . B FE 1364 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.296 ? metalc ? metalc14 B OE1 GLU 105 B GLU 105 1_555 H FE FE . B FE 1364 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.293 ? metalc ? metalc15 B OE1 GLU 143 B GLU 143 1_555 H FE FE . B FE 1364 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.943 ? metalc ? metalc16 B OE2 GLU 143 B GLU 143 1_555 I FE FE . B FE 1365 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.587 ? metalc ? metalc17 B ND1 HIS 146 B HIS 146 1_555 H FE FE . B FE 1364 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.075 ? metalc ? metalc18 B OE2 GLU 196 B GLU 196 1_555 I FE FE . B FE 1365 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.317 ? metalc ? metalc19 B OE1 GLU 196 B GLU 196 1_555 I FE FE . B FE 1365 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.542 ? metalc ? metalc20 B OE2 GLU 229 B GLU 229 1_555 H FE FE . B FE 1364 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.417 ? metalc ? metalc21 B OE1 GLU 229 B GLU 229 1_555 I FE FE . B FE 1365 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.268 ? metalc ? metalc22 I FE FE . B FE 1365 1_555 P O HOH . B HOH 2001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.642 ? metalc ? metalc23 C OE2 GLU 105 C GLU 105 1_555 L FE FE . C FE 1364 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.18 ? metalc ? metalc24 C OE1 GLU 105 C GLU 105 1_555 L FE FE . C FE 1364 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.215 ? metalc ? metalc25 C OE1 GLU 143 C GLU 143 1_555 L FE FE . C FE 1364 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.074 ? metalc ? metalc26 C OE2 GLU 143 C GLU 143 1_555 M FE FE . C FE 1365 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.132 ? metalc ? metalc27 C ND1 HIS 146 C HIS 146 1_555 L FE FE . C FE 1364 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.288 ? metalc ? metalc28 C OE1 GLU 196 C GLU 196 1_555 M FE FE . C FE 1365 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.388 ? metalc ? metalc29 C OE2 GLU 196 C GLU 196 1_555 M FE FE . C FE 1365 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.746 ? metalc ? metalc30 C OE2 GLU 229 C GLU 229 1_555 L FE FE . C FE 1364 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.288 ? metalc ? metalc31 C OE1 GLU 229 C GLU 229 1_555 M FE FE . C FE 1365 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.414 ? metalc ? metalc32 L FE FE . C FE 1364 1_555 M FE FE . C FE 1365 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.038 ? metalc ? metalc33 M FE FE . C FE 1365 1_555 Q O HOH . C HOH 2003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.745 ? # _chem_comp.formula 'Fe 3' _chem_comp.formula_weight 55.845 _chem_comp.id FE _chem_comp.mon_nstd_flag . _chem_comp.name 'FE (III) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 2XZ0 _atom_sites.fract_transf_matrix[1][1] 0.005311 _atom_sites.fract_transf_matrix[1][2] 0.003067 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006133 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012298 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 FE A 1 1364 1364 FE FE . F 3 FE A 1 1365 1365 FE FE . G 4 ZN A 1 1366 1366 ZN ZN . H 3 FE B 1 1364 1364 FE FE . I 3 FE B 1 1365 1365 FE FE . J 4 ZN B 1 1366 1366 ZN ZN . K 5 EDO B 1 1367 1367 EDO EDO . L 3 FE C 1 1364 1364 FE FE . M 3 FE C 1 1365 1365 FE FE . N 4 ZN C 1 1366 1366 ZN ZN . O 6 HOH A 1 2001 2001 HOH HOH . O 6 HOH A 2 2002 2002 HOH HOH . O 6 HOH A 3 2003 2003 HOH HOH . O 6 HOH A 4 2004 2004 HOH HOH . O 6 HOH A 5 2005 2005 HOH HOH . O 6 HOH A 6 2006 2006 HOH HOH . O 6 HOH A 7 2007 2007 HOH HOH . O 6 HOH A 8 2008 2008 HOH HOH . O 6 HOH A 9 2009 2009 HOH HOH . P 6 HOH B 1 2001 2001 HOH HOH . P 6 HOH B 2 2002 2002 HOH HOH . P 6 HOH B 3 2003 2003 HOH HOH . P 6 HOH B 4 2004 2004 HOH HOH . P 6 HOH B 5 2005 2005 HOH HOH . P 6 HOH B 6 2006 2006 HOH HOH . Q 6 HOH C 1 2001 2001 HOH HOH . Q 6 HOH C 2 2002 2002 HOH HOH . Q 6 HOH C 3 2003 2003 HOH HOH . Q 6 HOH C 4 2004 2004 HOH HOH . Q 6 HOH C 5 2005 2005 HOH HOH . Q 6 HOH C 6 2006 2006 HOH HOH . Q 6 HOH C 7 2007 2007 HOH HOH . Q 6 HOH C 8 2008 2008 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol FE _atom_site.label_atom_id FE _atom_site.label_comp_id FE _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id M _atom_site.label_entity_id 3 _atom_site.Cartn_x 2.144 _atom_site.Cartn_y -27.661 _atom_site.Cartn_z 9.194 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 83.63 _atom_site.pdbx_formal_charge 3 _atom_site.auth_atom_id FE _atom_site.auth_comp_id FE _atom_site.auth_seq_id 1365 _atom_site.auth_asym_id C _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 18 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 279 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #