data_2XZ1 # _model_server_result.job_id epeP6rlbMEvtO-6kQ0QJgQ _model_server_result.datetime_utc '2024-10-16 10:25:33' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2xz1 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":501}' # _entry.id 2XZ1 # _exptl.entry_id 2XZ1 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 136.989 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CACODYLATE ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2XZ1 _cell.length_a 76.404 _cell.length_b 76.404 _cell.length_c 403.372 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2XZ1 _symmetry.cell_setting ? _symmetry.Int_Tables_number 95 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 43 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 H N N ? 5 L N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 C C ASP 37 C ASP 37 1_555 C N SEP 38 C SEP 38 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale2 C C SEP 38 C SEP 38 1_555 C N LEU 39 C LEU 39 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale3 C O3P SEP 38 C SEP 38 1_555 M CAA PNY . C PNY 1138 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.456 ? covale ? covale4 D C ASP 37 D ASP 37 1_555 D N SEP 38 D SEP 38 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale5 D C SEP 38 D SEP 38 1_555 D N LEU 39 D LEU 39 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? metalc ? metalc1 A OE2 GLU 105 A GLU 105 1_555 E FE FE . A FE 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.376 ? metalc ? metalc2 A OE1 GLU 105 A GLU 105 1_555 E FE FE . A FE 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.449 ? metalc ? metalc3 A OE1 GLU 106 A GLU 106 1_555 G CA CA . A CA 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.042 ? metalc ? metalc4 A OE2 GLU 106 A GLU 106 1_555 G CA CA . A CA 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.947 ? metalc ? metalc5 A OE1 GLU 143 A GLU 143 1_555 E FE FE . A FE 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.931 ? metalc ? metalc6 A OE2 GLU 143 A GLU 143 1_555 F FE FE . A FE 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.321 ? metalc ? metalc7 A ND1 HIS 146 A HIS 146 1_555 E FE FE . A FE 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.607 ? metalc ? metalc8 A OE2 GLU 196 A GLU 196 1_555 F FE FE . A FE 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.532 ? metalc ? metalc9 A OE1 GLU 196 A GLU 196 1_555 F FE FE . A FE 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.291 ? metalc ? metalc10 A OE2 GLU 229 A GLU 229 1_555 E FE FE . A FE 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.412 ? metalc ? metalc11 A OE1 GLU 229 A GLU 229 1_555 F FE FE . A FE 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.455 ? metalc ? metalc12 A OE2 GLU 229 A GLU 229 1_555 F FE FE . A FE 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.462 ? metalc ? metalc13 E FE FE . A FE 401 1_555 F FE FE . A FE 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.973 ? metalc ? metalc14 E FE FE . A FE 401 1_555 H O1 CAC . A CAC 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.413 ? metalc ? metalc15 F FE FE . A FE 402 1_555 H O2 CAC . A CAC 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.096 ? metalc ? metalc16 B OE1 GLU 105 B GLU 105 1_555 I FE FE . B FE 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.426 ? metalc ? metalc17 B OE2 GLU 105 B GLU 105 1_555 I FE FE . B FE 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.271 ? metalc ? metalc18 B OE2 GLU 106 B GLU 106 1_555 K CA CA . B CA 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.023 ? metalc ? metalc19 B OE1 GLU 143 B GLU 143 1_555 I FE FE . B FE 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.796 ? metalc ? metalc20 B OE2 GLU 143 B GLU 143 1_555 J FE FE . B FE 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.467 ? metalc ? metalc21 B ND1 HIS 146 B HIS 146 1_555 I FE FE . B FE 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.535 ? metalc ? metalc22 B OD1 ASP 148 B ASP 148 1_555 K CA CA . B CA 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.937 ? metalc ? metalc23 B OE2 GLU 196 B GLU 196 1_555 J FE FE . B FE 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.593 ? metalc ? metalc24 B OE1 GLU 196 B GLU 196 1_555 J FE FE . B FE 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.166 ? metalc ? metalc25 B OE2 GLU 229 B GLU 229 1_555 I FE FE . B FE 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.605 ? metalc ? metalc26 B OE2 GLU 229 B GLU 229 1_555 J FE FE . B FE 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.492 ? metalc ? metalc27 B OE1 GLU 229 B GLU 229 1_555 J FE FE . B FE 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.586 ? metalc ? metalc28 I FE FE . B FE 401 1_555 J FE FE . B FE 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.119 ? metalc ? metalc29 I FE FE . B FE 401 1_555 L O2 CAC . B CAC 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.978 ? metalc ? metalc30 J FE FE . B FE 402 1_555 L O1 CAC . B CAC 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.503 ? # _chem_comp.formula 'C2 H6 As O2 -1' _chem_comp.formula_weight 136.989 _chem_comp.id CAC _chem_comp.mon_nstd_flag . _chem_comp.name 'CACODYLATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms dimethylarsinate # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag AS O1 CAC doub 70 n n AS O2 CAC sing 71 n n AS C1 CAC sing 72 n n AS C2 CAC sing 73 n n C1 H11 CAC sing 74 n n C1 H12 CAC sing 75 n n C1 H13 CAC sing 76 n n C2 H21 CAC sing 77 n n C2 H22 CAC sing 78 n n C2 H23 CAC sing 79 n n # _atom_sites.entry_id 2XZ1 _atom_sites.fract_transf_matrix[1][1] 0.013088 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013088 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.002479 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 FE A 1 401 401 FE FE . F 3 FE A 1 402 402 FE FE . G 4 CA A 1 403 403 CA CA . H 5 CAC A 1 501 501 CAC CAC . I 3 FE B 1 401 401 FE FE . J 3 FE B 1 402 402 FE FE . K 4 CA B 1 403 403 CA CA . L 5 CAC B 1 501 501 CAC CAC . M 6 PNY C 1 1138 1138 PNY PNY . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 AS AS CAC . . . H 5 13.876 18.583 -17.947 0.8 77.95 ? AS CAC 501 A 1 HETATM 2 O O1 CAC . . . H 5 12.848 19.885 -17.376 0.8 78.14 ? O1 CAC 501 A 1 HETATM 3 O O2 CAC . . . H 5 12.926 17.13 -18.204 0.8 78.4 ? O2 CAC 501 A 1 HETATM 4 C C1 CAC . . . H 5 14.824 19.127 -19.582 0.8 77.56 ? C1 CAC 501 A 1 HETATM 5 C C2 CAC . . . H 5 15.22 18.09 -16.595 0.8 78.2 ? C2 CAC 501 A 1 # _model_server_stats.io_time_ms 29 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 16 _model_server_stats.query_time_ms 276 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 5 #