data_2Y03 # _model_server_result.job_id dTqxEdF8nEQDVasr4kgr-A _model_server_result.datetime_utc '2024-11-22 11:33:02' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2y03 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":601}' # _entry.id 2Y03 # _exptl.entry_id 2Y03 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 211.258 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description ISOPRENALINE _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 109.7 _cell.angle_gamma 90 _cell.entry_id 2Y03 _cell.length_a 89.7 _cell.length_b 61.6 _cell.length_c 101.6 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2Y03 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 PISA dimeric 2 software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,H,N 1 1 B,I,J,K,L,M,O 2 1 A,B,C,D,E,F,G,H,I,J,K,L,M,N,O 3 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 G N N ? 4 M N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 84 A CYS 114 1_555 A SG CYS 169 A CYS 199 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.083 ? disulf ? disulf2 A SG CYS 162 A CYS 192 1_555 A SG CYS 168 A CYS 198 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.081 ? disulf ? disulf3 B SG CYS 84 B CYS 114 1_555 B SG CYS 169 B CYS 199 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? disulf ? disulf4 B SG CYS 162 B CYS 192 1_555 B SG CYS 168 B CYS 198 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.092 ? metalc ? metalc1 A O CYS 162 A CYS 192 1_555 H NA NA . A NA 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.661 ? metalc ? metalc2 A O ASP 165 A ASP 195 1_555 H NA NA . A NA 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.552 ? metalc ? metalc3 A O CYS 168 A CYS 198 1_555 H NA NA . A NA 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.458 ? # _chem_comp.formula 'C11 H17 N O3' _chem_comp.formula_weight 211.258 _chem_comp.id 5FW _chem_comp.mon_nstd_flag . _chem_comp.name ISOPRENALINE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CAI CAG 5FW sing 63 n n CAG CAJ 5FW sing 64 n n CAG NAD 5FW sing 65 n n NAD CAF 5FW sing 66 n n CAF CAE 5FW sing 67 n n CAE OAA 5FW sing 68 n n CAE CAH 5FW sing 69 n n CAH CAK 5FW sing 70 n y CAH CAL 5FW doub 71 n y CAK CAM 5FW doub 72 n y CAL CAN 5FW sing 73 n y CAN CAO 5FW doub 74 n y CAO OAC 5FW sing 75 n n CAO CAM 5FW sing 76 n y CAM OAB 5FW sing 77 n n CAI HAI1 5FW sing 78 n n CAI HAI2 5FW sing 79 n n CAI HAI3 5FW sing 80 n n CAG HAG 5FW sing 81 n n CAJ HAJ1 5FW sing 82 n n CAJ HAJ2 5FW sing 83 n n CAJ HAJ3 5FW sing 84 n n NAD HAD 5FW sing 85 n n CAF HAF1 5FW sing 86 n n CAF HAF2 5FW sing 87 n n CAE HAE 5FW sing 88 n n OAA HAA 5FW sing 89 n n CAK HAK 5FW sing 90 n n CAL HAL 5FW sing 91 n n CAN HAN 5FW sing 92 n n OAC HAC 5FW sing 93 n n OAB HAB 5FW sing 94 n n # _atom_sites.entry_id 2Y03 _atom_sites.fract_transf_matrix[1][1] 0.011148 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.003992 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016234 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010454 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 Y01 A 1 401 401 Y01 Y01 . D 3 2CV A 1 501 501 2CV 2CV . E 3 2CV A 1 502 502 2CV 2CV . F 3 2CV A 1 503 503 2CV 2CV . G 4 5FW A 1 601 601 5FW 5FW . H 5 NA A 1 701 701 NA NA . I 2 Y01 B 1 401 401 Y01 Y01 . J 3 2CV B 1 501 501 2CV 2CV . K 3 2CV B 1 502 502 2CV 2CV . L 3 2CV B 1 503 503 2CV 2CV . M 4 5FW B 1 601 601 5FW 5FW . N 6 HOH A 1 2002 2002 HOH HOH . N 6 HOH A 2 2003 2003 HOH HOH . N 6 HOH A 3 2004 2004 HOH HOH . N 6 HOH A 4 2005 2005 HOH HOH . N 6 HOH A 5 2006 2006 HOH HOH . N 6 HOH A 6 2007 2007 HOH HOH . O 6 HOH B 1 2001 2001 HOH HOH . O 6 HOH B 2 2002 2002 HOH HOH . O 6 HOH B 3 2003 2003 HOH HOH . O 6 HOH B 4 2004 2004 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CAI 5FW . . . G 4 -27.698 -15.447 25.092 1 35.44 ? CAI 5FW 601 A 1 HETATM 2 C CAG 5FW . . . G 4 -26.178 -15.4 25.217 1 36.8 ? CAG 5FW 601 A 1 HETATM 3 C CAJ 5FW . . . G 4 -25.54 -16.542 24.393 1 34.29 ? CAJ 5FW 601 A 1 HETATM 4 N NAD 5FW . . . G 4 -25.703 -14.074 24.758 1 38.3 ? NAD 5FW 601 A 1 HETATM 5 C CAF 5FW . . . G 4 -24.277 -13.801 25.048 1 37.66 ? CAF 5FW 601 A 1 HETATM 6 C CAE 5FW . . . G 4 -24.04 -12.291 25.085 1 34.64 ? CAE 5FW 601 A 1 HETATM 7 O OAA 5FW . . . G 4 -24.423 -11.773 23.821 1 39.74 ? OAA 5FW 601 A 1 HETATM 8 C CAH 5FW . . . G 4 -22.573 -11.997 25.334 1 34.89 ? CAH 5FW 601 A 1 HETATM 9 C CAK 5FW . . . G 4 -21.982 -12.477 26.481 1 36.17 ? CAK 5FW 601 A 1 HETATM 10 C CAL 5FW . . . G 4 -21.809 -11.255 24.431 1 42.16 ? CAL 5FW 601 A 1 HETATM 11 C CAN 5FW . . . G 4 -20.457 -10.984 24.678 1 44.17 ? CAN 5FW 601 A 1 HETATM 12 C CAO 5FW . . . G 4 -19.874 -11.48 25.838 1 42.56 ? CAO 5FW 601 A 1 HETATM 13 O OAC 5FW . . . G 4 -18.566 -11.233 26.086 1 45.38 ? OAC 5FW 601 A 1 HETATM 14 C CAM 5FW . . . G 4 -20.641 -12.228 26.733 1 39.01 ? CAM 5FW 601 A 1 HETATM 15 O OAB 5FW . . . G 4 -20.106 -12.729 27.877 1 39.16 ? OAB 5FW 601 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 12 _model_server_stats.query_time_ms 296 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 15 #