data_2Y04 # _model_server_result.job_id z9ZG5CYOnnhXc7gofyc83Q _model_server_result.datetime_utc '2024-11-22 21:26:48' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2y04 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"S","auth_seq_id":601}' # _entry.id 2Y04 # _exptl.entry_id 2Y04 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 239.311 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description SALBUTAMOL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 109.9 _cell.angle_gamma 90 _cell.entry_id 2Y04 _cell.length_a 89.9 _cell.length_b 62 _cell.length_c 101.5 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2Y04 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 PISA dimeric 2 software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,H,I,J,K,T 1 1 B,L,M,N,O,P,Q,R,S,U 2 1 A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U 3 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 J N N ? 4 S N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 84 A CYS 114 1_555 A SG CYS 169 A CYS 199 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.05 ? disulf ? disulf2 A SG CYS 162 A CYS 192 1_555 A SG CYS 168 A CYS 198 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.063 ? disulf ? disulf3 B SG CYS 84 B CYS 114 1_555 B SG CYS 169 B CYS 199 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? disulf ? disulf4 B SG CYS 162 B CYS 192 1_555 B SG CYS 168 B CYS 198 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.057 ? # _chem_comp.formula 'C13 H21 N O3' _chem_comp.formula_weight 239.311 _chem_comp.id 68H _chem_comp.mon_nstd_flag . _chem_comp.name SALBUTAMOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O2 C2 68H sing 63 n n C2 C12 68H sing 64 n n C12 C11 68H sing 65 n y C12 C13 68H doub 66 n y C11 O1 68H sing 67 n n C11 C10 68H doub 68 n y C10 C9 68H sing 69 n y C9 C8 68H doub 70 n y C13 C8 68H sing 71 n y C8 C1 68H sing 72 n n C1 O3 68H sing 73 n n C1 C3 68H sing 74 n n C3 N1 68H sing 75 n n N1 C4 68H sing 76 n n C4 C7 68H sing 77 n n C4 C6 68H sing 78 n n C4 C5 68H sing 79 n n O2 H2 68H sing 80 n n C2 H21C 68H sing 81 n n C2 H22C 68H sing 82 n n C13 H13 68H sing 83 n n O1 H1 68H sing 84 n n C10 H10 68H sing 85 n n C9 H9 68H sing 86 n n C1 HA 68H sing 87 n n O3 H3 68H sing 88 n n C3 H31C 68H sing 89 n n C3 H32C 68H sing 90 n n N1 HB 68H sing 91 n n C7 H71C 68H sing 92 n n C7 H72C 68H sing 93 n n C7 H73C 68H sing 94 n n C6 H61C 68H sing 95 n n C6 H62C 68H sing 96 n n C6 H63C 68H sing 97 n n C5 H51C 68H sing 98 n n C5 H52C 68H sing 99 n n C5 H53C 68H sing 100 n n # _atom_sites.entry_id 2Y04 _atom_sites.fract_transf_matrix[1][1] 0.011123 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.004027 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016129 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010478 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 Y01 A 1 401 401 Y01 Y01 . D 2 Y01 A 1 402 402 Y01 Y01 . E 3 2CV A 1 501 501 2CV 2CV . F 3 2CV A 1 502 502 2CV 2CV . G 3 2CV A 1 503 503 2CV 2CV . H 3 2CV A 1 504 504 2CV 2CV . I 3 2CV A 1 505 505 2CV 2CV . J 4 68H A 1 601 601 68H 68H . K 5 NA A 1 701 701 NA NA . L 2 Y01 B 1 401 401 Y01 Y01 . M 2 Y01 B 1 402 402 Y01 Y01 . N 3 2CV B 1 501 501 2CV 2CV . O 3 2CV B 1 502 502 2CV 2CV . P 3 2CV B 1 503 503 2CV 2CV . Q 3 2CV B 1 504 504 2CV 2CV . R 3 2CV B 1 505 505 2CV 2CV . S 4 68H B 1 601 601 68H 68H . T 6 HOH A 1 2001 2001 HOH HOH . T 6 HOH A 2 2002 2002 HOH HOH . T 6 HOH A 3 2003 2003 HOH HOH . T 6 HOH A 4 2004 2004 HOH HOH . T 6 HOH A 5 2005 2005 HOH HOH . T 6 HOH A 6 2006 2006 HOH HOH . T 6 HOH A 7 2007 2007 HOH HOH . T 6 HOH A 8 2008 2008 HOH HOH . T 6 HOH A 9 2009 2009 HOH HOH . T 6 HOH A 10 2010 2010 HOH HOH . U 6 HOH B 1 2001 2001 HOH HOH . U 6 HOH B 2 2002 2002 HOH HOH . U 6 HOH B 3 2003 2003 HOH HOH . U 6 HOH B 4 2004 2004 HOH HOH . U 6 HOH B 5 2005 2005 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O2 68H . . . S 4 4.956 -9.32 17.175 1 37.68 ? O2 68H 601 B 1 HETATM 2 C C2 68H . . . S 4 4.874 -8.78 18.494 1 32.15 ? C2 68H 601 B 1 HETATM 3 C C12 68H . . . S 4 5.779 -9.5 19.483 1 34.33 ? C12 68H 601 B 1 HETATM 4 C C11 68H . . . S 4 5.198 -9.941 20.775 1 38.1 ? C11 68H 601 B 1 HETATM 5 O O1 68H . . . S 4 3.88 -9.707 21.023 1 40.77 ? O1 68H 601 B 1 HETATM 6 C C10 68H . . . S 4 6.001 -10.58 21.721 1 38.92 ? C10 68H 601 B 1 HETATM 7 C C9 68H . . . S 4 7.351 -10.803 21.448 1 37.3 ? C9 68H 601 B 1 HETATM 8 C C13 68H . . . S 4 7.144 -9.739 19.264 1 33.86 ? C13 68H 601 B 1 HETATM 9 C C8 68H . . . S 4 7.927 -10.387 20.236 1 34.96 ? C8 68H 601 B 1 HETATM 10 C C1 68H . . . S 4 9.38 -10.64 19.995 1 32.76 ? C1 68H 601 B 1 HETATM 11 O O3 68H . . . S 4 10.05 -11.123 21.179 1 25.6 ? O3 68H 601 B 1 HETATM 12 C C3 68H . . . S 4 9.562 -11.629 18.846 1 34.75 ? C3 68H 601 B 1 HETATM 13 N N1 68H . . . S 4 10.91 -12.186 18.794 1 34.17 ? N1 68H 601 B 1 HETATM 14 C C4 68H . . . S 4 11.406 -12.852 17.599 1 32.47 ? C4 68H 601 B 1 HETATM 15 C C7 68H . . . S 4 10.53 -14.06 17.286 1 31.43 ? C7 68H 601 B 1 HETATM 16 C C6 68H . . . S 4 11.373 -11.854 16.437 1 30.3 ? C6 68H 601 B 1 HETATM 17 C C5 68H . . . S 4 12.819 -13.365 17.867 1 31.22 ? C5 68H 601 B 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 281 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 17 #