data_2Y6C
#
_model_server_result.job_id            lNhmmP66NAri1svkZW-xlQ 
_model_server_result.datetime_utc      '2025-02-05 12:54:20' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2y6c 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"G","auth_seq_id":1269}' 
#
_entry.id    2Y6C 
#
_exptl.entry_id    2Y6C 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              446.828 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            N-{[4-CHLORO-3-(TRIFLUOROMETHYL)PHENYL]SULFONYL}-L-TRYPTOPHAN 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            2Y6C 
_cell.length_a            76.669 
_cell.length_b            76.669 
_cell.length_c            61.238 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 2Y6C 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        79 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'I 4' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2,3,4 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 3_555 -y,x,z 0 -1 0 1 0 0 0 0 1 0 0 0 
3 'crystal symmetry operation' 4_555 y,-x,z 0 1 0 -1 0 0 0 0 1 0 0 0 
4 'crystal symmetry operation' 2_555 -x,-y,z -1 0 0 0 -1 0 0 0 1 0 0 0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      5 
_struct_asym.id                             G 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A O ASP 60 A ASP 158 1_555 B CA CA . A CA 1264 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.369 ? 
metalc ? metalc2 A NE2 HIS 70 A HIS 168 1_555 D ZN ZN . A ZN 1266 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.02 ? 
metalc ? metalc3 A OD2 ASP 72 A ASP 170 1_555 D ZN ZN . A ZN 1266 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.997 ? 
metalc ? metalc4 A OD1 ASP 77 A ASP 175 1_555 C CA CA . A CA 1265 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.446 ? 
metalc ? metalc5 A O GLY 78 A GLY 176 1_555 C CA CA . A CA 1265 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.282 ? 
metalc ? metalc6 A O GLY 80 A GLY 178 1_555 C CA CA . A CA 1265 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.411 ? 
metalc ? metalc7 A O THR 82 A THR 180 1_555 C CA CA . A CA 1265 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.307 ? 
metalc ? metalc8 A NE2 HIS 85 A HIS 183 1_555 D ZN ZN . A ZN 1266 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.131 ? 
metalc ? metalc9 A O GLY 92 A GLY 190 1_555 B CA CA . A CA 1264 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.524 ? 
metalc ? metalc10 A O GLY 94 A GLY 192 1_555 B CA CA . A CA 1264 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.322 ? 
metalc ? metalc11 A OD1 ASP 96 A ASP 194 1_555 B CA CA . A CA 1264 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.547 ? 
metalc ? metalc12 A ND1 HIS 98 A HIS 196 1_555 D ZN ZN . A ZN 1266 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.941 ? 
metalc ? metalc13 A OD2 ASP 100 A ASP 198 1_555 C CA CA . A CA 1265 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.35 ? 
metalc ? metalc14 A OE2 GLU 103 A GLU 201 1_555 C CA CA . A CA 1265 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.204 ? 
metalc ? metalc15 A NE2 HIS 121 A HIS 219 1_555 E ZN ZN . A ZN 1267 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.97 ? 
metalc ? metalc16 A NE2 HIS 125 A HIS 223 1_555 E ZN ZN . A ZN 1267 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.107 ? 
metalc ? metalc17 A NE2 HIS 131 A HIS 229 1_555 E ZN ZN . A ZN 1267 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.066 ? 
metalc ? metalc18 B CA CA . A CA 1264 1_555 H O HOH . A HOH 2036 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.31 ? 
metalc ? metalc19 B CA CA . A CA 1264 1_555 H O HOH . A HOH 2052 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.438 ? 
metalc ? metalc20 E ZN ZN . A ZN 1267 1_555 G OXT TQI . A TQI 1269 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.946 ? 
#
_chem_comp.formula           'C18 H14 Cl F3 N2 O4 S' 
_chem_comp.formula_weight    446.828 
_chem_comp.id                TQI 
_chem_comp.mon_nstd_flag     n 
_chem_comp.name              N-{[4-CHLORO-3-(TRIFLUOROMETHYL)PHENYL]SULFONYL}-L-TRYPTOPHAN 
_chem_comp.type              'l-peptide linking' 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N CA TQI sing 297 n n 
N S1 TQI sing 298 n n 
CA C TQI sing 299 n n 
CA CB TQI sing 300 n n 
C O TQI doub 301 n n 
C OXT TQI sing 302 n n 
CB CG TQI sing 303 n n 
CG CD1 TQI doub 304 n y 
CG CD2 TQI sing 305 n y 
CD1 NE1 TQI sing 306 n y 
CD2 CE2 TQI sing 307 n y 
CD2 CE3 TQI doub 308 n y 
NE1 CE2 TQI sing 309 n y 
CE2 CZ2 TQI doub 310 n y 
CE3 CZ3 TQI sing 311 n y 
CZ2 CH2 TQI sing 312 n y 
CZ3 CH2 TQI doub 313 n y 
S1 C7 TQI sing 314 n n 
S1 O14 TQI doub 315 n n 
S1 O15 TQI doub 316 n n 
C2 C3 TQI sing 317 n n 
C2 C8 TQI doub 318 n y 
C2 C16 TQI sing 319 n y 
C3 F20 TQI sing 320 n n 
C3 F21 TQI sing 321 n n 
C3 F22 TQI sing 322 n n 
C7 C8 TQI sing 323 n y 
C7 C19 TQI doub 324 n y 
C16 C23 TQI doub 325 n y 
C16 CL TQI sing 326 n n 
C19 C23 TQI sing 327 n y 
OXT HXT TQI sing 328 n n 
N H TQI sing 329 n n 
CA HA TQI sing 330 n n 
CB HB1C TQI sing 331 n n 
CB HB2C TQI sing 332 n n 
CD1 HD1 TQI sing 333 n n 
NE1 HE1 TQI sing 334 n n 
CE3 HE3 TQI sing 335 n n 
CZ2 HZ2 TQI sing 336 n n 
CZ3 HZ3 TQI sing 337 n n 
CH2 HH2 TQI sing 338 n n 
C8 H8 TQI sing 339 n n 
C19 H19 TQI sing 340 n n 
C23 H23 TQI sing 341 n n 
#
_atom_sites.entry_id                     2Y6C 
_atom_sites.fract_transf_matrix[1][1]    0.013043 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.013043 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.01633 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 CA A 1 1264 1264 CA CA . 
C 2 CA A 1 1265 1265 CA CA . 
D 3 ZN A 1 1266 1266 ZN ZN . 
E 3 ZN A 1 1267 1267 ZN ZN . 
F 4 SO4 A 1 1268 1268 SO4 SO4 . 
G 5 TQI A 1 1269 1269 TQI TQI . 
H 6 HOH A 1 2001 2001 HOH HOH . 
H 6 HOH A 2 2002 2002 HOH HOH . 
H 6 HOH A 3 2003 2003 HOH HOH . 
H 6 HOH A 4 2004 2004 HOH HOH . 
H 6 HOH A 5 2005 2005 HOH HOH . 
H 6 HOH A 6 2006 2006 HOH HOH . 
H 6 HOH A 7 2007 2007 HOH HOH . 
H 6 HOH A 8 2008 2008 HOH HOH . 
H 6 HOH A 9 2009 2009 HOH HOH . 
H 6 HOH A 10 2010 2010 HOH HOH . 
H 6 HOH A 11 2011 2011 HOH HOH . 
H 6 HOH A 12 2012 2012 HOH HOH . 
H 6 HOH A 13 2013 2013 HOH HOH . 
H 6 HOH A 14 2014 2014 HOH HOH . 
H 6 HOH A 15 2015 2015 HOH HOH . 
H 6 HOH A 16 2016 2016 HOH HOH . 
H 6 HOH A 17 2017 2017 HOH HOH . 
H 6 HOH A 18 2018 2018 HOH HOH . 
H 6 HOH A 19 2019 2019 HOH HOH . 
H 6 HOH A 20 2020 2020 HOH HOH . 
H 6 HOH A 21 2021 2021 HOH HOH . 
H 6 HOH A 22 2022 2022 HOH HOH . 
H 6 HOH A 23 2023 2023 HOH HOH . 
H 6 HOH A 24 2024 2024 HOH HOH . 
H 6 HOH A 25 2025 2025 HOH HOH . 
H 6 HOH A 26 2026 2026 HOH HOH . 
H 6 HOH A 27 2027 2027 HOH HOH . 
H 6 HOH A 28 2028 2028 HOH HOH . 
H 6 HOH A 29 2029 2029 HOH HOH . 
H 6 HOH A 30 2030 2030 HOH HOH . 
H 6 HOH A 31 2031 2031 HOH HOH . 
H 6 HOH A 32 2032 2032 HOH HOH . 
H 6 HOH A 33 2033 2033 HOH HOH . 
H 6 HOH A 34 2034 2034 HOH HOH . 
H 6 HOH A 35 2035 2035 HOH HOH . 
H 6 HOH A 36 2036 2036 HOH HOH . 
H 6 HOH A 37 2037 2037 HOH HOH . 
H 6 HOH A 38 2038 2038 HOH HOH . 
H 6 HOH A 39 2039 2039 HOH HOH . 
H 6 HOH A 40 2040 2040 HOH HOH . 
H 6 HOH A 41 2041 2041 HOH HOH . 
H 6 HOH A 42 2042 2042 HOH HOH . 
H 6 HOH A 43 2043 2043 HOH HOH . 
H 6 HOH A 44 2044 2044 HOH HOH . 
H 6 HOH A 45 2045 2045 HOH HOH . 
H 6 HOH A 46 2046 2046 HOH HOH . 
H 6 HOH A 47 2047 2047 HOH HOH . 
H 6 HOH A 48 2048 2048 HOH HOH . 
H 6 HOH A 49 2049 2049 HOH HOH . 
H 6 HOH A 50 2050 2050 HOH HOH . 
H 6 HOH A 51 2051 2051 HOH HOH . 
H 6 HOH A 52 2052 2052 HOH HOH . 
H 6 HOH A 53 2053 2053 HOH HOH . 
H 6 HOH A 54 2054 2054 HOH HOH . 
H 6 HOH A 55 2055 2055 HOH HOH . 
H 6 HOH A 56 2056 2056 HOH HOH . 
H 6 HOH A 57 2057 2057 HOH HOH . 
H 6 HOH A 58 2058 2058 HOH HOH . 
H 6 HOH A 59 2059 2059 HOH HOH . 
H 6 HOH A 60 2060 2060 HOH HOH . 
H 6 HOH A 61 2061 2061 HOH HOH . 
H 6 HOH A 62 2062 2062 HOH HOH . 
H 6 HOH A 63 2063 2063 HOH HOH . 
H 6 HOH A 64 2064 2064 HOH HOH . 
H 6 HOH A 65 2065 2065 HOH HOH . 
H 6 HOH A 66 2066 2066 HOH HOH . 
H 6 HOH A 67 2067 2067 HOH HOH . 
H 6 HOH A 68 2068 2068 HOH HOH . 
H 6 HOH A 69 2069 2069 HOH HOH . 
H 6 HOH A 70 2070 2070 HOH HOH . 
H 6 HOH A 71 2071 2071 HOH HOH . 
H 6 HOH A 72 2072 2072 HOH HOH . 
H 6 HOH A 73 2073 2073 HOH HOH . 
H 6 HOH A 74 2074 2074 HOH HOH . 
H 6 HOH A 75 2075 2075 HOH HOH . 
H 6 HOH A 76 2076 2076 HOH HOH . 
H 6 HOH A 77 2077 2077 HOH HOH . 
H 6 HOH A 78 2078 2078 HOH HOH . 
H 6 HOH A 79 2079 2079 HOH HOH . 
H 6 HOH A 80 2080 2080 HOH HOH . 
H 6 HOH A 81 2081 2081 HOH HOH . 
H 6 HOH A 82 2082 2082 HOH HOH . 
H 6 HOH A 83 2083 2083 HOH HOH . 
H 6 HOH A 84 2084 2084 HOH HOH . 
H 6 HOH A 85 2085 2085 HOH HOH . 
H 6 HOH A 86 2086 2086 HOH HOH . 
H 6 HOH A 87 2087 2087 HOH HOH . 
H 6 HOH A 88 2088 2088 HOH HOH . 
H 6 HOH A 89 2089 2089 HOH HOH . 
H 6 HOH A 90 2090 2090 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N TQI . . . G 5 -7.467 -16.545 -7.998 1 17.87 ? N TQI 1269 A 1 
HETATM 2 C CA TQI . . . G 5 -7.676 -17.562 -9.038 1 21.4 ? CA TQI 1269 A 1 
HETATM 3 C C TQI . . . G 5 -8.425 -18.651 -8.324 1 20.13 ? C TQI 1269 A 1 
HETATM 4 O O TQI . . . G 5 -8.347 -18.935 -7.137 1 20.41 ? O TQI 1269 A 1 
HETATM 5 C CB TQI . . . G 5 -6.306 -18.068 -9.412 1 25.27 ? CB TQI 1269 A 1 
HETATM 6 C CG TQI . . . G 5 -6.165 -19.473 -9.025 1 30.97 ? CG TQI 1269 A 1 
HETATM 7 C CD1 TQI . . . G 5 -5.919 -19.962 -7.759 1 31.94 ? CD1 TQI 1269 A 1 
HETATM 8 C CD2 TQI . . . G 5 -6.266 -20.58 -9.906 1 31.7 ? CD2 TQI 1269 A 1 
HETATM 9 N NE1 TQI . . . G 5 -5.869 -21.319 -7.861 1 32.68 ? NE1 TQI 1269 A 1 
HETATM 10 C CE2 TQI . . . G 5 -6.075 -21.722 -9.153 1 32.48 ? CE2 TQI 1269 A 1 
HETATM 11 C CE3 TQI . . . G 5 -6.502 -20.674 -11.264 1 32.94 ? CE3 TQI 1269 A 1 
HETATM 12 C CZ2 TQI . . . G 5 -6.101 -22.995 -9.668 1 32.92 ? CZ2 TQI 1269 A 1 
HETATM 13 C CZ3 TQI . . . G 5 -6.532 -21.942 -11.791 1 32.54 ? CZ3 TQI 1269 A 1 
HETATM 14 C CH2 TQI . . . G 5 -6.339 -23.062 -11.021 1 33.12 ? CH2 TQI 1269 A 1 
HETATM 15 O OXT TQI . . . G 5 -9.247 -19.292 -9.171 1 18.61 ? OXT TQI 1269 A 1 
HETATM 16 S S1 TQI . . . G 5 -8.557 -15.235 -8.016 1 18.61 ? S1 TQI 1269 A 1 
HETATM 17 C C2 TQI . . . G 5 -11.402 -16.318 -5.411 1 18.18 ? C2 TQI 1269 A 1 
HETATM 18 C C3 TQI . . . G 5 -11.536 -16.251 -3.931 1 19.36 ? C3 TQI 1269 A 1 
HETATM 19 C C7 TQI . . . G 5 -10.064 -15.872 -7.31 1 18.49 ? C7 TQI 1269 A 1 
HETATM 20 C C8 TQI . . . G 5 -10.236 -15.832 -5.951 1 18.05 ? C8 TQI 1269 A 1 
HETATM 21 O O14 TQI . . . G 5 -8.901 -14.884 -9.383 1 17.91 ? O14 TQI 1269 A 1 
HETATM 22 O O15 TQI . . . G 5 -8.047 -14.21 -7.134 1 18.12 ? O15 TQI 1269 A 1 
HETATM 23 C C16 TQI . . . G 5 -12.387 -16.831 -6.234 1 19.91 ? C16 TQI 1269 A 1 
HETATM 24 C C19 TQI . . . G 5 -11.034 -16.38 -8.14 1 19.58 ? C19 TQI 1269 A 1 
HETATM 25 F F20 TQI . . . G 5 -10.496 -15.599 -3.352 1 20.57 ? F20 TQI 1269 A 1 
HETATM 26 F F21 TQI . . . G 5 -11.533 -17.475 -3.346 1 18.35 ? F21 TQI 1269 A 1 
HETATM 27 F F22 TQI . . . G 5 -12.662 -15.595 -3.533 1 19.99 ? F22 TQI 1269 A 1 
HETATM 28 C C23 TQI . . . G 5 -12.204 -16.86 -7.598 1 19.46 ? C23 TQI 1269 A 1 
HETATM 29 CL CL TQI . . . G 5 -13.876 -17.453 -5.598 1 23.04 ? CL TQI 1269 A 1 
#
_model_server_stats.io_time_ms              6 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           369 
_model_server_stats.encode_time_ms          17 
_model_server_stats.element_count           29 
#