data_2Y7W # _model_server_result.job_id ua1iW9GOPwlc6yqa5Scuzg _model_server_result.datetime_utc '2024-11-16 14:49:18' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2y7w # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":1301}' # _entry.id 2Y7W # _exptl.entry_id 2Y7W _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 194.226 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'TETRAETHYLENE GLYCOL' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 108.63 _cell.angle_gamma 90 _cell.entry_id 2Y7W _cell.length_a 54.187 _cell.length_b 118.957 _cell.length_c 80.558 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2Y7W _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,E,F,G,H,I,K,L 1 1 C,D,J,M,N 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 F N N ? 3 G N N ? 3 I N N # _chem_comp.formula 'C8 H18 O5' _chem_comp.formula_weight 194.226 _chem_comp.id PG4 _chem_comp.mon_nstd_flag . _chem_comp.name 'TETRAETHYLENE GLYCOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C1 PG4 sing 237 n n O1 HO1 PG4 sing 238 n n C1 C2 PG4 sing 239 n n C1 H11 PG4 sing 240 n n C1 H12 PG4 sing 241 n n C2 O2 PG4 sing 242 n n C2 H21 PG4 sing 243 n n C2 H22 PG4 sing 244 n n O2 C3 PG4 sing 245 n n C3 C4 PG4 sing 246 n n C3 H31 PG4 sing 247 n n C3 H32 PG4 sing 248 n n C4 O3 PG4 sing 249 n n C4 H41 PG4 sing 250 n n C4 H42 PG4 sing 251 n n O3 C5 PG4 sing 252 n n C5 C6 PG4 sing 253 n n C5 H51 PG4 sing 254 n n C5 H52 PG4 sing 255 n n C6 O4 PG4 sing 256 n n C6 H61 PG4 sing 257 n n C6 H62 PG4 sing 258 n n O4 C7 PG4 sing 259 n n C7 C8 PG4 sing 260 n n C7 H71 PG4 sing 261 n n C7 H72 PG4 sing 262 n n C8 O5 PG4 sing 263 n n C8 H81 PG4 sing 264 n n C8 H82 PG4 sing 265 n n O5 HO5 PG4 sing 266 n n # _atom_sites.entry_id 2Y7W _atom_sites.fract_transf_matrix[1][1] 0.018455 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.006221 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008406 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.0131 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 SAL A 1 1300 1300 SAL SAL . F 3 PG4 A 1 1301 1301 PG4 PG4 . G 3 PG4 A 1 1302 1302 PG4 PG4 . H 2 SAL B 1 1300 1300 SAL SAL . I 3 PG4 B 1 1301 1301 PG4 PG4 . J 2 SAL C 1 1300 1300 SAL SAL . K 4 HOH A 1 2001 2001 HOH HOH . K 4 HOH A 2 2002 2002 HOH HOH . K 4 HOH A 3 2003 2003 HOH HOH . K 4 HOH A 4 2004 2004 HOH HOH . K 4 HOH A 5 2005 2005 HOH HOH . K 4 HOH A 6 2006 2006 HOH HOH . K 4 HOH A 7 2007 2007 HOH HOH . K 4 HOH A 8 2008 2008 HOH HOH . K 4 HOH A 9 2009 2009 HOH HOH . K 4 HOH A 10 2010 2010 HOH HOH . K 4 HOH A 11 2011 2011 HOH HOH . K 4 HOH A 12 2012 2012 HOH HOH . L 4 HOH B 1 2001 2001 HOH HOH . L 4 HOH B 2 2002 2002 HOH HOH . L 4 HOH B 3 2003 2003 HOH HOH . L 4 HOH B 4 2004 2004 HOH HOH . L 4 HOH B 5 2005 2005 HOH HOH . L 4 HOH B 6 2006 2006 HOH HOH . L 4 HOH B 7 2007 2007 HOH HOH . L 4 HOH B 8 2008 2008 HOH HOH . L 4 HOH B 9 2009 2009 HOH HOH . L 4 HOH B 10 2010 2010 HOH HOH . L 4 HOH B 11 2011 2011 HOH HOH . L 4 HOH B 12 2012 2012 HOH HOH . L 4 HOH B 13 2013 2013 HOH HOH . L 4 HOH B 14 2014 2014 HOH HOH . M 4 HOH C 1 2001 2001 HOH HOH . M 4 HOH C 2 2002 2002 HOH HOH . M 4 HOH C 3 2003 2003 HOH HOH . M 4 HOH C 4 2004 2004 HOH HOH . M 4 HOH C 5 2005 2005 HOH HOH . M 4 HOH C 6 2006 2006 HOH HOH . M 4 HOH C 7 2007 2007 HOH HOH . M 4 HOH C 8 2008 2008 HOH HOH . M 4 HOH C 9 2009 2009 HOH HOH . M 4 HOH C 10 2010 2010 HOH HOH . M 4 HOH C 11 2011 2011 HOH HOH . M 4 HOH C 12 2012 2012 HOH HOH . M 4 HOH C 13 2013 2013 HOH HOH . N 4 HOH D 1 2001 2001 HOH HOH . N 4 HOH D 2 2002 2002 HOH HOH . N 4 HOH D 3 2003 2003 HOH HOH . N 4 HOH D 4 2004 2004 HOH HOH . N 4 HOH D 5 2005 2005 HOH HOH . N 4 HOH D 6 2006 2006 HOH HOH . N 4 HOH D 7 2007 2007 HOH HOH . N 4 HOH D 8 2008 2008 HOH HOH . N 4 HOH D 9 2009 2009 HOH HOH . N 4 HOH D 10 2010 2010 HOH HOH . N 4 HOH D 11 2011 2011 HOH HOH . N 4 HOH D 12 2012 2012 HOH HOH . N 4 HOH D 13 2013 2013 HOH HOH . N 4 HOH D 14 2014 2014 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 PG4 . . . I 3 34.143 -8.7 -4.755 1 52.45 ? O1 PG4 1301 B 1 HETATM 2 C C1 PG4 . . . I 3 34.561 -8.366 -3.426 1 48.52 ? C1 PG4 1301 B 1 HETATM 3 C C2 PG4 . . . I 3 35.12 -6.933 -3.394 1 60.47 ? C2 PG4 1301 B 1 HETATM 4 O O2 PG4 . . . I 3 35.615 -6.372 -2.121 1 75.34 ? O2 PG4 1301 B 1 HETATM 5 C C3 PG4 . . . I 3 34.647 -6.196 -1.049 1 43.07 ? C3 PG4 1301 B 1 HETATM 6 C C4 PG4 . . . I 3 34.003 -7.494 -0.582 1 62.35 ? C4 PG4 1301 B 1 HETATM 7 O O3 PG4 . . . I 3 33.004 -7.243 0.428 1 83.89 ? O3 PG4 1301 B 1 HETATM 8 C C5 PG4 . . . I 3 32.392 -8.513 0.658 1 60.77 ? C5 PG4 1301 B 1 HETATM 9 C C6 PG4 . . . I 3 31.158 -8.456 1.545 1 44.53 ? C6 PG4 1301 B 1 HETATM 10 O O4 PG4 . . . I 3 30.707 -9.835 1.628 1 42.78 ? O4 PG4 1301 B 1 HETATM 11 C C7 PG4 . . . I 3 30.454 -10.31 0.289 1 50.99 ? C7 PG4 1301 B 1 HETATM 12 C C8 PG4 . . . I 3 29.934 -11.75 0.151 1 46.04 ? C8 PG4 1301 B 1 HETATM 13 O O5 PG4 . . . I 3 29.757 -12.078 -1.247 1 30.11 ? O5 PG4 1301 B 1 # _model_server_stats.io_time_ms 43 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 17 _model_server_stats.query_time_ms 282 _model_server_stats.encode_time_ms 11 _model_server_stats.element_count 13 #