data_2Y9R
#
_model_server_result.job_id            z4R-KXeK6nx0QyezJ5q7Aw 
_model_server_result.datetime_utc      '2025-03-06 08:57:18' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2y9r 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":1099}' 
#
_entry.id    2Y9R 
#
_exptl.entry_id    2Y9R 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              546.646 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'DODECAETHYLENE GLYCOL' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            2Y9R 
_cell.length_a            43.45 
_cell.length_b            43.45 
_cell.length_c            56.38 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 2Y9R 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        77 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 42' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 B N N 
? 2 C N N 
#
_chem_comp.formula           'C24 H50 O13' 
_chem_comp.formula_weight    546.646 
_chem_comp.id                12P 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'DODECAETHYLENE GLYCOL' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'POLYETHYLENE GLYCOL PEG400' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O37 C36 12P sing 1 n n 
O37 H37 12P sing 2 n n 
C36 C35 12P sing 3 n n 
C36 H361 12P sing 4 n n 
C36 H362 12P sing 5 n n 
C35 O34 12P sing 6 n n 
C35 H351 12P sing 7 n n 
C35 H352 12P sing 8 n n 
O34 C33 12P sing 9 n n 
C33 C32 12P sing 10 n n 
C33 H331 12P sing 11 n n 
C33 H332 12P sing 12 n n 
C32 O31 12P sing 13 n n 
C32 H321 12P sing 14 n n 
C32 H322 12P sing 15 n n 
O31 C30 12P sing 16 n n 
C30 C29 12P sing 17 n n 
C30 H301 12P sing 18 n n 
C30 H302 12P sing 19 n n 
C29 O28 12P sing 20 n n 
C29 H291 12P sing 21 n n 
C29 H292 12P sing 22 n n 
O28 C27 12P sing 23 n n 
C27 C26 12P sing 24 n n 
C27 H271 12P sing 25 n n 
C27 H272 12P sing 26 n n 
C26 O25 12P sing 27 n n 
C26 H261 12P sing 28 n n 
C26 H262 12P sing 29 n n 
O25 C24 12P sing 30 n n 
C24 C23 12P sing 31 n n 
C24 H241 12P sing 32 n n 
C24 H242 12P sing 33 n n 
C23 O22 12P sing 34 n n 
C23 H231 12P sing 35 n n 
C23 H232 12P sing 36 n n 
O22 C21 12P sing 37 n n 
C21 C20 12P sing 38 n n 
C21 H211 12P sing 39 n n 
C21 H212 12P sing 40 n n 
C20 O19 12P sing 41 n n 
C20 H201 12P sing 42 n n 
C20 H202 12P sing 43 n n 
O19 C18 12P sing 44 n n 
C18 C17 12P sing 45 n n 
C18 H181 12P sing 46 n n 
C18 H182 12P sing 47 n n 
C17 O16 12P sing 48 n n 
C17 H171 12P sing 49 n n 
C17 H172 12P sing 50 n n 
O16 C15 12P sing 51 n n 
C15 C14 12P sing 52 n n 
C15 H151 12P sing 53 n n 
C15 H152 12P sing 54 n n 
C14 O13 12P sing 55 n n 
C14 H141 12P sing 56 n n 
C14 H142 12P sing 57 n n 
O13 C12 12P sing 58 n n 
C12 C11 12P sing 59 n n 
C12 H121 12P sing 60 n n 
C12 H122 12P sing 61 n n 
C11 O10 12P sing 62 n n 
C11 H111 12P sing 63 n n 
C11 H112 12P sing 64 n n 
O10 C9 12P sing 65 n n 
C9 C8 12P sing 66 n n 
C9 H91 12P sing 67 n n 
C9 H92 12P sing 68 n n 
C8 O7 12P sing 69 n n 
C8 H81 12P sing 70 n n 
C8 H82 12P sing 71 n n 
O7 C6 12P sing 72 n n 
C6 C5 12P sing 73 n n 
C6 H61 12P sing 74 n n 
C6 H62 12P sing 75 n n 
C5 O4 12P sing 76 n n 
C5 H51 12P sing 77 n n 
C5 H52 12P sing 78 n n 
O4 C3 12P sing 79 n n 
C3 C2 12P sing 80 n n 
C3 H31 12P sing 81 n n 
C3 H32 12P sing 82 n n 
C2 O1 12P sing 83 n n 
C2 H21 12P sing 84 n n 
C2 H22 12P sing 85 n n 
O1 HO1 12P sing 86 n n 
#
_atom_sites.entry_id                     2Y9R 
_atom_sites.fract_transf_matrix[1][1]    0.023015 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.023015 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.017737 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 12P T 1 1099 1099 12P 12P . 
C 2 12P T 1 1100 1100 12P 12P . 
D 3 HOH T 1 2001 2001 HOH HOH . 
D 3 HOH T 2 2002 2002 HOH HOH . 
D 3 HOH T 3 2003 2003 HOH HOH . 
D 3 HOH T 4 2004 2004 HOH HOH . 
D 3 HOH T 5 2005 2005 HOH HOH . 
D 3 HOH T 6 2006 2006 HOH HOH . 
D 3 HOH T 7 2007 2007 HOH HOH . 
D 3 HOH T 8 2008 2008 HOH HOH . 
D 3 HOH T 9 2009 2009 HOH HOH . 
D 3 HOH T 10 2010 2010 HOH HOH . 
D 3 HOH T 11 2011 2011 HOH HOH . 
D 3 HOH T 12 2012 2012 HOH HOH . 
D 3 HOH T 13 2013 2013 HOH HOH . 
D 3 HOH T 14 2014 2014 HOH HOH . 
D 3 HOH T 15 2015 2015 HOH HOH . 
D 3 HOH T 16 2016 2016 HOH HOH . 
D 3 HOH T 17 2017 2017 HOH HOH . 
D 3 HOH T 18 2018 2018 HOH HOH . 
D 3 HOH T 19 2019 2019 HOH HOH . 
D 3 HOH T 20 2020 2020 HOH HOH . 
D 3 HOH T 21 2021 2021 HOH HOH . 
D 3 HOH T 22 2022 2022 HOH HOH . 
D 3 HOH T 23 2023 2023 HOH HOH . 
D 3 HOH T 24 2024 2024 HOH HOH . 
D 3 HOH T 25 2025 2025 HOH HOH . 
D 3 HOH T 26 2026 2026 HOH HOH . 
D 3 HOH T 27 2027 2027 HOH HOH . 
D 3 HOH T 28 2028 2028 HOH HOH . 
D 3 HOH T 29 2029 2029 HOH HOH . 
D 3 HOH T 30 2030 2030 HOH HOH . 
D 3 HOH T 31 2031 2031 HOH HOH . 
D 3 HOH T 32 2032 2032 HOH HOH . 
D 3 HOH T 33 2033 2033 HOH HOH . 
D 3 HOH T 34 2034 2034 HOH HOH . 
D 3 HOH T 35 2035 2035 HOH HOH . 
D 3 HOH T 36 2036 2036 HOH HOH . 
D 3 HOH T 37 2037 2037 HOH HOH . 
D 3 HOH T 38 2038 2038 HOH HOH . 
D 3 HOH T 39 2039 2039 HOH HOH . 
D 3 HOH T 40 2040 2040 HOH HOH . 
D 3 HOH T 41 2041 2041 HOH HOH . 
D 3 HOH T 42 2042 2042 HOH HOH . 
D 3 HOH T 43 2043 2043 HOH HOH . 
D 3 HOH T 44 2044 2044 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C35 12P . . . B 2 1.737 -5.043 -4.697 0.5 31.67 ? C35 12P 1099 T 1 
HETATM 2 O O34 12P . . . B 2 1.521 -5.997 -3.65 0.5 33.24 ? O34 12P 1099 T 1 
HETATM 3 C C33 12P . . . B 2 1.238 -5.358 -2.395 0.5 31.18 ? C33 12P 1099 T 1 
HETATM 4 C C32 12P . . . B 2 2.076 -5.955 -1.272 0.5 30.79 ? C32 12P 1099 T 1 
HETATM 5 O O31 12P . . . B 2 1.461 -5.623 -0.023 0.5 32.71 ? O31 12P 1099 T 1 
HETATM 6 C C30 12P . . . B 2 2.413 -5.275 0.97 0.5 32.55 ? C30 12P 1099 T 1 
HETATM 7 C C29 12P . . . B 2 2.002 -3.987 1.681 0.5 35.11 ? C29 12P 1099 T 1 
HETATM 8 O O28 12P . . . B 2 1.13 -3.212 0.851 0.5 38.75 ? O28 12P 1099 T 1 
HETATM 9 C C27 12P . . . B 2 0.268 -2.36 1.607 0.5 40.3 ? C27 12P 1099 T 1 
HETATM 10 C C26 12P . . . B 2 0.04 -1.02 0.91 0.5 42.79 ? C26 12P 1099 T 1 
HETATM 11 O O25 12P . . . B 2 -0.936 -0.234 1.611 0.5 44.22 ? O25 12P 1099 T 1 
HETATM 12 C C24 12P . . . B 2 -0.454 1.067 1.978 0.5 44.66 ? C24 12P 1099 T 1 
HETATM 13 C C23 12P . . . B 2 0.183 1.825 0.8 0.5 44.85 ? C23 12P 1099 T 1 
HETATM 14 O O22 12P . . . B 2 0.702 0.938 -0.198 0.5 45.61 ? O22 12P 1099 T 1 
HETATM 15 C C21 12P . . . B 2 -0.19 0.733 -1.294 0.5 43.82 ? C21 12P 1099 T 1 
HETATM 16 C C20 12P . . . B 2 0.592 0.317 -2.534 0.5 44.03 ? C20 12P 1099 T 1 
HETATM 17 O O19 12P . . . B 2 0.326 -1.051 -2.802 0.5 43.96 ? O19 12P 1099 T 1 
HETATM 18 C C18 12P . . . B 2 -0.141 -1.678 -1.611 0.5 41.87 ? C18 12P 1099 T 1 
#
_model_server_stats.io_time_ms              0 
_model_server_stats.parse_time_ms           5 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           241 
_model_server_stats.encode_time_ms          6 
_model_server_stats.element_count           18 
#