data_2YJ0 # _model_server_result.job_id 4Jevystr0stpDHc4RSrr-g _model_server_result.datetime_utc '2024-11-22 05:45:55' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2yj0 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"V","auth_seq_id":1070}' # _entry.id 2YJ0 # _exptl.entry_id 2YJ0 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2YJ0 _cell.length_a 94 _cell.length_b 103.8 _cell.length_c 82.5 _cell.Z_PDB 48 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2YJ0 _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dodecameric _pdbx_struct_assembly.oligomeric_count 12 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 3_455 -x-1,y,-z+1/2 -1 0 0 0 1 0 0 0 -1 -94 0 41.25 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 6 V N N ? 6 Z N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A SG CYS 59 A CYS 59 1_555 G C1 420 . A 420 100 1_555 ? A ? ? A ? ? ? ? ? ? ? 1.806 ? covale ? covale2 A SG CYS 59 A CYS 59 1_555 G C1 420 . A 420 100 1_555 ? B ? ? B ? ? ? ? ? ? ? 1.811 ? covale ? covale3 B SG CYS 59 B CYS 59 1_555 K C1 420 . B 420 100 1_555 ? A ? ? A ? ? ? ? ? ? ? 1.81 ? covale ? covale4 B SG CYS 59 B CYS 59 1_555 K C1 420 . B 420 100 1_555 ? B ? ? B ? ? ? ? ? ? ? 1.805 ? covale ? covale5 C SG CYS 59 C CYS 59 1_555 P C1 420 . C 420 100 1_555 ? A ? ? A ? ? ? ? ? ? ? 1.816 ? covale ? covale6 C SG CYS 59 C CYS 59 1_555 P C1 420 . C 420 100 1_555 ? B ? ? B ? ? ? ? ? ? ? 1.813 ? covale ? covale7 D SG CYS 59 D CYS 59 1_555 S C1 420 . D 420 100 1_555 ? B ? ? B ? ? ? ? ? ? ? 1.815 ? covale ? covale8 D SG CYS 59 D CYS 59 1_555 S C1 420 . D 420 100 1_555 ? A ? ? A ? ? ? ? ? ? ? 1.814 ? covale ? covale9 E SG CYS 59 E CYS 59 1_555 W C1 420 . E 420 100 1_555 ? B ? ? B ? ? ? ? ? ? ? 1.803 ? covale ? covale10 E SG CYS 59 E CYS 59 1_555 W C1 420 . E 420 100 1_555 ? A ? ? A ? ? ? ? ? ? ? 1.807 ? covale ? covale11 F SG CYS 59 F CYS 59 1_555 AA C1 420 . F 420 100 1_555 ? B ? ? B ? ? ? ? ? ? ? 1.811 ? covale ? covale12 F SG CYS 59 F CYS 59 1_555 AA C1 420 . F 420 100 1_555 ? A ? ? A ? ? ? ? ? ? ? 1.809 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 475 n n S O2 SO4 doub 476 n n S O3 SO4 sing 477 n n S O4 SO4 sing 478 n n # _atom_sites.entry_id 2YJ0 _atom_sites.fract_transf_matrix[1][1] 0.010638 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009634 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012121 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 2 420 A 1 100 100 420 420 . H 3 COA A 1 200 200 COA COA . I 4 FMN A 1 300 300 FMN FMN . J 5 CL A 1 1070 1070 CL CL . K 2 420 B 1 100 100 420 420 . L 3 COA B 1 200 200 COA COA . M 4 FMN B 1 300 300 FMN FMN . N 5 CL B 1 1070 1070 CL CL . O 5 CL B 1 1071 1071 CL CL . P 2 420 C 1 100 100 420 420 . Q 3 COA C 1 200 200 COA COA . R 4 FMN C 1 300 300 FMN FMN . S 2 420 D 1 100 100 420 420 . T 3 COA D 1 200 200 COA COA . U 4 FMN D 1 300 300 FMN FMN . V 6 SO4 D 1 1070 1070 SO4 SO4 . W 2 420 E 1 100 100 420 420 . X 3 COA E 1 200 200 COA COA . Y 4 FMN E 1 300 300 FMN FMN . Z 6 SO4 E 1 1070 1070 SO4 SO4 . AA 2 420 F 1 100 100 420 420 . BA 3 COA F 1 200 200 COA COA . CA 4 FMN F 1 300 300 FMN FMN . DA 7 HOH A 1 2001 2001 HOH HOH . DA 7 HOH A 2 2002 2002 HOH HOH . DA 7 HOH A 3 2003 2003 HOH HOH . DA 7 HOH A 4 2004 2004 HOH HOH . DA 7 HOH A 5 2005 2005 HOH HOH . DA 7 HOH A 6 2006 2006 HOH HOH . DA 7 HOH A 7 2007 2007 HOH HOH . DA 7 HOH A 8 2008 2008 HOH HOH . DA 7 HOH A 9 2009 2009 HOH HOH . DA 7 HOH A 10 2010 2010 HOH HOH . DA 7 HOH A 11 2011 2011 HOH HOH . DA 7 HOH A 12 2012 2012 HOH HOH . DA 7 HOH A 13 2013 2013 HOH HOH . DA 7 HOH A 14 2014 2014 HOH HOH . DA 7 HOH A 15 2015 2015 HOH HOH . DA 7 HOH A 16 2016 2016 HOH HOH . DA 7 HOH A 17 2017 2017 HOH HOH . DA 7 HOH A 18 2018 2018 HOH HOH . DA 7 HOH A 19 2019 2019 HOH HOH . DA 7 HOH A 20 2020 2020 HOH HOH . DA 7 HOH A 21 2021 2021 HOH HOH . DA 7 HOH A 22 2022 2022 HOH HOH . DA 7 HOH A 23 2023 2023 HOH HOH . DA 7 HOH A 24 2024 2024 HOH HOH . DA 7 HOH A 25 2025 2025 HOH HOH . DA 7 HOH A 26 2026 2026 HOH HOH . DA 7 HOH A 27 2027 2027 HOH HOH . DA 7 HOH A 28 2028 2028 HOH HOH . DA 7 HOH A 29 2029 2029 HOH HOH . DA 7 HOH A 30 2030 2030 HOH HOH . DA 7 HOH A 31 2031 2031 HOH HOH . EA 7 HOH B 1 2001 2001 HOH HOH . EA 7 HOH B 2 2002 2002 HOH HOH . EA 7 HOH B 3 2003 2003 HOH HOH . EA 7 HOH B 4 2004 2004 HOH HOH . EA 7 HOH B 5 2005 2005 HOH HOH . EA 7 HOH B 6 2006 2006 HOH HOH . EA 7 HOH B 7 2007 2007 HOH HOH . EA 7 HOH B 8 2008 2008 HOH HOH . EA 7 HOH B 9 2009 2009 HOH HOH . EA 7 HOH B 10 2010 2010 HOH HOH . EA 7 HOH B 11 2011 2011 HOH HOH . EA 7 HOH B 12 2012 2012 HOH HOH . EA 7 HOH B 13 2013 2013 HOH HOH . EA 7 HOH B 14 2014 2014 HOH HOH . EA 7 HOH B 15 2015 2015 HOH HOH . EA 7 HOH B 16 2016 2016 HOH HOH . EA 7 HOH B 17 2017 2017 HOH HOH . EA 7 HOH B 18 2018 2018 HOH HOH . EA 7 HOH B 19 2019 2019 HOH HOH . EA 7 HOH B 20 2020 2020 HOH HOH . EA 7 HOH B 21 2021 2021 HOH HOH . EA 7 HOH B 22 2022 2022 HOH HOH . EA 7 HOH B 23 2023 2023 HOH HOH . EA 7 HOH B 24 2024 2024 HOH HOH . EA 7 HOH B 25 2025 2025 HOH HOH . EA 7 HOH B 26 2026 2026 HOH HOH . FA 7 HOH C 1 2001 2001 HOH HOH . FA 7 HOH C 2 2002 2002 HOH HOH . FA 7 HOH C 3 2003 2003 HOH HOH . FA 7 HOH C 4 2004 2004 HOH HOH . FA 7 HOH C 5 2005 2005 HOH HOH . FA 7 HOH C 6 2006 2006 HOH HOH . FA 7 HOH C 7 2007 2007 HOH HOH . FA 7 HOH C 8 2008 2008 HOH HOH . FA 7 HOH C 9 2009 2009 HOH HOH . FA 7 HOH C 10 2010 2010 HOH HOH . FA 7 HOH C 11 2011 2011 HOH HOH . FA 7 HOH C 12 2012 2012 HOH HOH . FA 7 HOH C 13 2013 2013 HOH HOH . FA 7 HOH C 14 2014 2014 HOH HOH . FA 7 HOH C 15 2015 2015 HOH HOH . FA 7 HOH C 16 2016 2016 HOH HOH . FA 7 HOH C 17 2017 2017 HOH HOH . FA 7 HOH C 18 2018 2018 HOH HOH . FA 7 HOH C 19 2019 2019 HOH HOH . FA 7 HOH C 20 2020 2020 HOH HOH . FA 7 HOH C 21 2021 2021 HOH HOH . FA 7 HOH C 22 2022 2022 HOH HOH . FA 7 HOH C 23 2023 2023 HOH HOH . FA 7 HOH C 24 2024 2024 HOH HOH . FA 7 HOH C 25 2025 2025 HOH HOH . FA 7 HOH C 26 2026 2026 HOH HOH . FA 7 HOH C 27 2027 2027 HOH HOH . GA 7 HOH D 1 2001 2001 HOH HOH . GA 7 HOH D 2 2002 2002 HOH HOH . GA 7 HOH D 3 2003 2003 HOH HOH . GA 7 HOH D 4 2004 2004 HOH HOH . GA 7 HOH D 5 2005 2005 HOH HOH . GA 7 HOH D 6 2006 2006 HOH HOH . GA 7 HOH D 7 2007 2007 HOH HOH . GA 7 HOH D 8 2008 2008 HOH HOH . GA 7 HOH D 9 2009 2009 HOH HOH . GA 7 HOH D 10 2010 2010 HOH HOH . GA 7 HOH D 11 2011 2011 HOH HOH . GA 7 HOH D 12 2012 2012 HOH HOH . GA 7 HOH D 13 2013 2013 HOH HOH . GA 7 HOH D 14 2014 2014 HOH HOH . GA 7 HOH D 15 2015 2015 HOH HOH . GA 7 HOH D 16 2016 2016 HOH HOH . GA 7 HOH D 17 2017 2017 HOH HOH . GA 7 HOH D 18 2018 2018 HOH HOH . GA 7 HOH D 19 2019 2019 HOH HOH . GA 7 HOH D 20 2020 2020 HOH HOH . GA 7 HOH D 21 2021 2021 HOH HOH . GA 7 HOH D 22 2022 2022 HOH HOH . GA 7 HOH D 23 2023 2023 HOH HOH . GA 7 HOH D 24 2024 2024 HOH HOH . GA 7 HOH D 25 2025 2025 HOH HOH . GA 7 HOH D 26 2026 2026 HOH HOH . GA 7 HOH D 27 2027 2027 HOH HOH . GA 7 HOH D 28 2028 2028 HOH HOH . GA 7 HOH D 29 2029 2029 HOH HOH . GA 7 HOH D 30 2030 2030 HOH HOH . GA 7 HOH D 31 2031 2031 HOH HOH . HA 7 HOH E 1 2001 2001 HOH HOH . HA 7 HOH E 2 2002 2002 HOH HOH . HA 7 HOH E 3 2003 2003 HOH HOH . HA 7 HOH E 4 2004 2004 HOH HOH . HA 7 HOH E 5 2005 2005 HOH HOH . HA 7 HOH E 6 2006 2006 HOH HOH . HA 7 HOH E 7 2007 2007 HOH HOH . HA 7 HOH E 8 2008 2008 HOH HOH . HA 7 HOH E 9 2009 2009 HOH HOH . HA 7 HOH E 10 2010 2010 HOH HOH . HA 7 HOH E 11 2011 2011 HOH HOH . HA 7 HOH E 12 2012 2012 HOH HOH . HA 7 HOH E 13 2013 2013 HOH HOH . HA 7 HOH E 14 2014 2014 HOH HOH . HA 7 HOH E 15 2015 2015 HOH HOH . HA 7 HOH E 16 2016 2016 HOH HOH . HA 7 HOH E 17 2017 2017 HOH HOH . HA 7 HOH E 18 2018 2018 HOH HOH . HA 7 HOH E 19 2019 2019 HOH HOH . HA 7 HOH E 20 2020 2020 HOH HOH . HA 7 HOH E 21 2021 2021 HOH HOH . HA 7 HOH E 22 2022 2022 HOH HOH . IA 7 HOH F 1 2001 2001 HOH HOH . IA 7 HOH F 2 2002 2002 HOH HOH . IA 7 HOH F 3 2003 2003 HOH HOH . IA 7 HOH F 4 2004 2004 HOH HOH . IA 7 HOH F 5 2005 2005 HOH HOH . IA 7 HOH F 6 2006 2006 HOH HOH . IA 7 HOH F 7 2007 2007 HOH HOH . IA 7 HOH F 8 2008 2008 HOH HOH . IA 7 HOH F 9 2009 2009 HOH HOH . IA 7 HOH F 10 2010 2010 HOH HOH . IA 7 HOH F 11 2011 2011 HOH HOH . IA 7 HOH F 12 2012 2012 HOH HOH . IA 7 HOH F 13 2013 2013 HOH HOH . IA 7 HOH F 14 2014 2014 HOH HOH . IA 7 HOH F 15 2015 2015 HOH HOH . IA 7 HOH F 16 2016 2016 HOH HOH . IA 7 HOH F 17 2017 2017 HOH HOH . IA 7 HOH F 18 2018 2018 HOH HOH . IA 7 HOH F 19 2019 2019 HOH HOH . IA 7 HOH F 20 2020 2020 HOH HOH . IA 7 HOH F 21 2021 2021 HOH HOH . IA 7 HOH F 22 2022 2022 HOH HOH . IA 7 HOH F 23 2023 2023 HOH HOH . IA 7 HOH F 24 2024 2024 HOH HOH . IA 7 HOH F 25 2025 2025 HOH HOH . IA 7 HOH F 26 2026 2026 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . V 6 -63.615 -9.749 21.208 1 34.1 ? S SO4 1070 D 1 HETATM 2 O O1 SO4 . . . V 6 -62.553 -9.607 20.214 1 34.31 ? O1 SO4 1070 D 1 HETATM 3 O O2 SO4 . . . V 6 -64.898 -9.413 20.595 1 34.63 ? O2 SO4 1070 D 1 HETATM 4 O O3 SO4 . . . V 6 -63.661 -11.127 21.693 1 34.96 ? O3 SO4 1070 D 1 HETATM 5 O O4 SO4 . . . V 6 -63.369 -8.855 22.336 1 34.66 ? O4 SO4 1070 D 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 305 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 5 #