data_2YJM # _model_server_result.job_id 2zAWoD6Y8ngFSUCjUqUBFQ _model_server_result.datetime_utc '2024-12-22 03:29:16' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2yjm # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1164}' # _entry.id 2YJM # _exptl.entry_id 2YJM _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 207.29 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 94.16 _cell.angle_gamma 90 _cell.entry_id 2YJM _cell.length_a 91.16 _cell.length_b 37.93 _cell.length_c 49.12 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2YJM _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C8 H17 N O3 S' _chem_comp.formula_weight 207.29 _chem_comp.id NHE _chem_comp.mon_nstd_flag . _chem_comp.name '2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms N-CYCLOHEXYLTAURINE;CHES # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C3' C2' NHE sing 237 n n C3' C4' NHE sing 238 n n C3' "H3'1" NHE sing 239 n n C3' "H3'2" NHE sing 240 n n C2' C1' NHE sing 241 n n C2' "H2'1" NHE sing 242 n n C2' "H2'2" NHE sing 243 n n C1' C6' NHE sing 244 n n C1' N NHE sing 245 n n C1' "HC'1" NHE sing 246 n n C6' C5' NHE sing 247 n n C6' "H6'1" NHE sing 248 n n C6' "H6'2" NHE sing 249 n n N C1 NHE sing 250 n n N HN NHE sing 251 n n C1 C2 NHE sing 252 n n C1 HC11 NHE sing 253 n n C1 HC12 NHE sing 254 n n C2 S NHE sing 255 n n C2 HC21 NHE sing 256 n n C2 HC22 NHE sing 257 n n S O1 NHE doub 258 n n S O2 NHE doub 259 n n S O3 NHE sing 260 n n O3 HO3 NHE sing 261 n n C5' C4' NHE sing 262 n n C5' "H5'1" NHE sing 263 n n C5' "H5'2" NHE sing 264 n n C4' "H4'1" NHE sing 265 n n C4' "H4'2" NHE sing 266 n n # _atom_sites.entry_id 2YJM _atom_sites.fract_transf_matrix[1][1] 0.01097 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000798 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.026364 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.020412 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NHE A 1 1164 1164 NHE NHE . C 3 HOH A 1 2001 2001 HOH HOH . C 3 HOH A 2 2002 2002 HOH HOH . C 3 HOH A 3 2003 2003 HOH HOH . C 3 HOH A 4 2004 2004 HOH HOH . C 3 HOH A 5 2005 2005 HOH HOH . C 3 HOH A 6 2006 2006 HOH HOH . C 3 HOH A 7 2007 2007 HOH HOH . C 3 HOH A 8 2008 2008 HOH HOH . C 3 HOH A 9 2009 2009 HOH HOH . C 3 HOH A 10 2010 2010 HOH HOH . C 3 HOH A 11 2011 2011 HOH HOH . C 3 HOH A 12 2012 2012 HOH HOH . C 3 HOH A 13 2013 2013 HOH HOH . C 3 HOH A 14 2014 2014 HOH HOH . C 3 HOH A 15 2015 2015 HOH HOH . C 3 HOH A 16 2016 2016 HOH HOH . C 3 HOH A 17 2017 2017 HOH HOH . C 3 HOH A 18 2018 2018 HOH HOH . C 3 HOH A 19 2019 2019 HOH HOH . C 3 HOH A 20 2020 2020 HOH HOH . C 3 HOH A 21 2021 2021 HOH HOH . C 3 HOH A 22 2022 2022 HOH HOH . C 3 HOH A 23 2023 2023 HOH HOH . C 3 HOH A 24 2024 2024 HOH HOH . C 3 HOH A 25 2025 2025 HOH HOH . C 3 HOH A 26 2026 2026 HOH HOH . C 3 HOH A 27 2027 2027 HOH HOH . C 3 HOH A 28 2028 2028 HOH HOH . C 3 HOH A 29 2029 2029 HOH HOH . C 3 HOH A 30 2030 2030 HOH HOH . C 3 HOH A 31 2031 2031 HOH HOH . C 3 HOH A 32 2032 2032 HOH HOH . C 3 HOH A 33 2033 2033 HOH HOH . C 3 HOH A 34 2034 2034 HOH HOH . C 3 HOH A 35 2035 2035 HOH HOH . C 3 HOH A 36 2036 2036 HOH HOH . C 3 HOH A 37 2037 2037 HOH HOH . C 3 HOH A 38 2038 2038 HOH HOH . C 3 HOH A 39 2039 2039 HOH HOH . C 3 HOH A 40 2040 2040 HOH HOH . C 3 HOH A 41 2041 2041 HOH HOH . C 3 HOH A 42 2042 2042 HOH HOH . C 3 HOH A 43 2043 2043 HOH HOH . C 3 HOH A 44 2044 2044 HOH HOH . C 3 HOH A 45 2045 2045 HOH HOH . C 3 HOH A 46 2046 2046 HOH HOH . C 3 HOH A 47 2047 2047 HOH HOH . C 3 HOH A 48 2048 2048 HOH HOH . C 3 HOH A 49 2049 2049 HOH HOH . C 3 HOH A 50 2050 2050 HOH HOH . C 3 HOH A 51 2051 2051 HOH HOH . C 3 HOH A 52 2052 2052 HOH HOH . C 3 HOH A 53 2053 2053 HOH HOH . C 3 HOH A 54 2054 2054 HOH HOH . C 3 HOH A 55 2055 2055 HOH HOH . C 3 HOH A 56 2056 2056 HOH HOH . C 3 HOH A 57 2057 2057 HOH HOH . C 3 HOH A 58 2058 2058 HOH HOH . C 3 HOH A 59 2059 2059 HOH HOH . C 3 HOH A 60 2060 2060 HOH HOH . C 3 HOH A 61 2061 2061 HOH HOH . C 3 HOH A 62 2062 2062 HOH HOH . C 3 HOH A 63 2063 2063 HOH HOH . C 3 HOH A 64 2064 2064 HOH HOH . C 3 HOH A 65 2065 2065 HOH HOH . C 3 HOH A 66 2066 2066 HOH HOH . C 3 HOH A 67 2067 2067 HOH HOH . C 3 HOH A 68 2068 2068 HOH HOH . C 3 HOH A 69 2069 2069 HOH HOH . C 3 HOH A 70 2070 2070 HOH HOH . C 3 HOH A 71 2071 2071 HOH HOH . C 3 HOH A 72 2072 2072 HOH HOH . C 3 HOH A 73 2073 2073 HOH HOH . C 3 HOH A 74 2074 2074 HOH HOH . C 3 HOH A 75 2075 2075 HOH HOH . C 3 HOH A 76 2076 2076 HOH HOH . C 3 HOH A 77 2077 2077 HOH HOH . C 3 HOH A 78 2078 2078 HOH HOH . C 3 HOH A 79 2079 2079 HOH HOH . C 3 HOH A 80 2080 2080 HOH HOH . C 3 HOH A 81 2081 2081 HOH HOH . C 3 HOH A 82 2082 2082 HOH HOH . C 3 HOH A 83 2083 2083 HOH HOH . C 3 HOH A 84 2084 2084 HOH HOH . C 3 HOH A 85 2085 2085 HOH HOH . C 3 HOH A 86 2086 2086 HOH HOH . C 3 HOH A 87 2087 2087 HOH HOH . C 3 HOH A 88 2088 2088 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C3' NHE . . . B 2 -11.598 23.815 15.82 1 43.95 ? C3' NHE 1164 A 1 HETATM 2 C C2' NHE . . . B 2 -11.984 22.341 16.084 1 43.31 ? C2' NHE 1164 A 1 HETATM 3 C C1' NHE . . . B 2 -13.042 21.796 15.1 1 43.49 ? C1' NHE 1164 A 1 HETATM 4 C C6' NHE . . . B 2 -13.231 22.739 13.901 1 43.4 ? C6' NHE 1164 A 1 HETATM 5 N N NHE . . . B 2 -12.649 20.451 14.636 1 43.35 ? N NHE 1164 A 1 HETATM 6 C C1 NHE . . . B 2 -13.809 19.564 14.724 1 42.91 ? C1 NHE 1164 A 1 HETATM 7 C C2 NHE . . . B 2 -13.337 18.113 14.806 1 42.58 ? C2 NHE 1164 A 1 HETATM 8 S S NHE . . . B 2 -13.707 17.223 13.259 1 40.82 ? S NHE 1164 A 1 HETATM 9 O O1 NHE . . . B 2 -14.884 17.868 12.584 1 42.13 ? O1 NHE 1164 A 1 HETATM 10 O O2 NHE . . . B 2 -14.048 15.788 13.534 1 42.54 ? O2 NHE 1164 A 1 HETATM 11 O O3 NHE . . . B 2 -12.533 17.302 12.343 1 40.69 ? O3 NHE 1164 A 1 HETATM 12 C C5' NHE . . . B 2 -13.671 24.147 14.351 1 42.87 ? C5' NHE 1164 A 1 HETATM 13 C C4' NHE . . . B 2 -12.812 24.705 15.498 1 43.19 ? C4' NHE 1164 A 1 # _model_server_stats.io_time_ms 51 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 299 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 13 #