data_2YLP # _model_server_result.job_id 9bOEEPkOYOlL6aF2fRfQmQ _model_server_result.datetime_utc '2024-11-28 07:34:02' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2ylp # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":1921}' # _entry.id 2YLP # _exptl.entry_id 2YLP _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 288.424 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description TESTOSTERONE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2YLP _cell.length_a 56.71 _cell.length_b 66.48 _cell.length_c 73.49 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2YLP _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C19 H28 O2' _chem_comp.formula_weight 288.424 _chem_comp.id TES _chem_comp.mon_nstd_flag . _chem_comp.name TESTOSTERONE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 TES sing 327 n n C1 C10 TES sing 328 n n C1 H11 TES sing 329 n n C1 H12 TES sing 330 n n C2 C3 TES sing 331 n n C2 H21 TES sing 332 n n C2 H22 TES sing 333 n n C3 O3 TES doub 334 n n C3 C4 TES sing 335 n n C4 C5 TES doub 336 n n C4 H4 TES sing 337 n n C5 C6 TES sing 338 n n C5 C10 TES sing 339 n n C6 C7 TES sing 340 n n C6 H61 TES sing 341 n n C6 H62 TES sing 342 n n C7 C8 TES sing 343 n n C7 H71 TES sing 344 n n C7 H72 TES sing 345 n n C8 C9 TES sing 346 n n C8 C14 TES sing 347 n n C8 H8 TES sing 348 n n C9 C10 TES sing 349 n n C9 C11 TES sing 350 n n C9 H9 TES sing 351 n n C10 C19 TES sing 352 n n C11 C12 TES sing 353 n n C11 H111 TES sing 354 n n C11 H112 TES sing 355 n n C12 C13 TES sing 356 n n C12 H121 TES sing 357 n n C12 H122 TES sing 358 n n C13 C14 TES sing 359 n n C13 C17 TES sing 360 n n C13 C18 TES sing 361 n n C14 C15 TES sing 362 n n C14 H14 TES sing 363 n n C15 C16 TES sing 364 n n C15 H151 TES sing 365 n n C15 H152 TES sing 366 n n C16 C17 TES sing 367 n n C16 H161 TES sing 368 n n C16 H162 TES sing 369 n n C17 O17 TES sing 370 n n C17 H17 TES sing 371 n n O17 HO7 TES sing 372 n n C18 H181 TES sing 373 n n C18 H182 TES sing 374 n n C18 H183 TES sing 375 n n C19 H191 TES sing 376 n n C19 H192 TES sing 377 n n C19 H193 TES sing 378 n n # _atom_sites.entry_id 2YLP _atom_sites.fract_transf_matrix[1][1] 0.017634 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015042 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013607 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 A 1 1920 1920 SO4 SO4 . C 3 TES A 1 1921 1921 TES TES . D 4 056 A 1 1922 1922 056 056 . E 4 056 A 1 1923 1923 056 056 . F 5 HOH A 1 2001 2001 HOH HOH . F 5 HOH A 2 2002 2002 HOH HOH . F 5 HOH A 3 2003 2003 HOH HOH . F 5 HOH A 4 2004 2004 HOH HOH . F 5 HOH A 5 2005 2005 HOH HOH . F 5 HOH A 6 2006 2006 HOH HOH . F 5 HOH A 7 2007 2007 HOH HOH . F 5 HOH A 8 2008 2008 HOH HOH . F 5 HOH A 9 2009 2009 HOH HOH . F 5 HOH A 10 2010 2010 HOH HOH . F 5 HOH A 11 2011 2011 HOH HOH . F 5 HOH A 12 2012 2012 HOH HOH . F 5 HOH A 13 2013 2013 HOH HOH . F 5 HOH A 14 2014 2014 HOH HOH . F 5 HOH A 15 2015 2015 HOH HOH . F 5 HOH A 16 2016 2016 HOH HOH . F 5 HOH A 17 2017 2017 HOH HOH . F 5 HOH A 18 2018 2018 HOH HOH . F 5 HOH A 19 2019 2019 HOH HOH . F 5 HOH A 20 2020 2020 HOH HOH . F 5 HOH A 21 2021 2021 HOH HOH . F 5 HOH A 22 2022 2022 HOH HOH . F 5 HOH A 23 2023 2023 HOH HOH . F 5 HOH A 24 2024 2024 HOH HOH . F 5 HOH A 25 2025 2025 HOH HOH . F 5 HOH A 26 2026 2026 HOH HOH . F 5 HOH A 27 2027 2027 HOH HOH . F 5 HOH A 28 2028 2028 HOH HOH . F 5 HOH A 29 2029 2029 HOH HOH . F 5 HOH A 30 2030 2030 HOH HOH . F 5 HOH A 31 2031 2031 HOH HOH . F 5 HOH A 32 2032 2032 HOH HOH . F 5 HOH A 33 2033 2033 HOH HOH . F 5 HOH A 34 2034 2034 HOH HOH . F 5 HOH A 35 2035 2035 HOH HOH . F 5 HOH A 36 2036 2036 HOH HOH . F 5 HOH A 37 2037 2037 HOH HOH . F 5 HOH A 38 2038 2038 HOH HOH . F 5 HOH A 39 2039 2039 HOH HOH . F 5 HOH A 40 2040 2040 HOH HOH . F 5 HOH A 41 2041 2041 HOH HOH . F 5 HOH A 42 2042 2042 HOH HOH . F 5 HOH A 43 2043 2043 HOH HOH . F 5 HOH A 44 2044 2044 HOH HOH . F 5 HOH A 45 2045 2045 HOH HOH . F 5 HOH A 46 2046 2046 HOH HOH . F 5 HOH A 47 2047 2047 HOH HOH . F 5 HOH A 48 2048 2048 HOH HOH . F 5 HOH A 49 2049 2049 HOH HOH . F 5 HOH A 50 2050 2050 HOH HOH . F 5 HOH A 51 2051 2051 HOH HOH . F 5 HOH A 52 2052 2052 HOH HOH . F 5 HOH A 53 2053 2053 HOH HOH . F 5 HOH A 54 2054 2054 HOH HOH . F 5 HOH A 55 2055 2055 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 TES . . . C 3 27.468 -4.851 -5.066 1 22.59 ? C1 TES 1921 A 1 HETATM 2 C C2 TES . . . C 3 26.762 -6.164 -5.403 1 23.02 ? C2 TES 1921 A 1 HETATM 3 C C3 TES . . . C 3 25.298 -6.049 -5.026 1 24.49 ? C3 TES 1921 A 1 HETATM 4 O O3 TES . . . C 3 24.665 -7.065 -4.764 1 24.38 ? O3 TES 1921 A 1 HETATM 5 C C4 TES . . . C 3 24.658 -4.707 -5.016 1 20.35 ? C4 TES 1921 A 1 HETATM 6 C C5 TES . . . C 3 25.312 -3.549 -5.26 1 21.65 ? C5 TES 1921 A 1 HETATM 7 C C6 TES . . . C 3 24.509 -2.227 -5.199 1 20.4 ? C6 TES 1921 A 1 HETATM 8 C C7 TES . . . C 3 25.349 -1.081 -4.595 1 20.86 ? C7 TES 1921 A 1 HETATM 9 C C8 TES . . . C 3 26.779 -1.043 -5.123 1 23.24 ? C8 TES 1921 A 1 HETATM 10 C C9 TES . . . C 3 27.528 -2.39 -4.943 1 24.86 ? C9 TES 1921 A 1 HETATM 11 C C10 TES . . . C 3 26.803 -3.571 -5.601 1 23.23 ? C10 TES 1921 A 1 HETATM 12 C C11 TES . . . C 3 29.022 -2.379 -5.406 1 24.02 ? C11 TES 1921 A 1 HETATM 13 C C12 TES . . . C 3 29.82 -1.164 -4.869 1 26.32 ? C12 TES 1921 A 1 HETATM 14 C C13 TES . . . C 3 29.046 0.159 -5.013 1 23.89 ? C13 TES 1921 A 1 HETATM 15 C C14 TES . . . C 3 27.625 0.038 -4.458 1 22.75 ? C14 TES 1921 A 1 HETATM 16 C C15 TES . . . C 3 27.096 1.476 -4.404 1 22.49 ? C15 TES 1921 A 1 HETATM 17 C C16 TES . . . C 3 28.321 2.246 -3.903 1 21.06 ? C16 TES 1921 A 1 HETATM 18 C C17 TES . . . C 3 29.525 1.317 -4.117 1 23.55 ? C17 TES 1921 A 1 HETATM 19 O O17 TES . . . C 3 30.616 2.078 -4.634 1 25.04 ? O17 TES 1921 A 1 HETATM 20 C C18 TES . . . C 3 28.976 0.515 -6.518 1 23.98 ? C18 TES 1921 A 1 HETATM 21 C C19 TES . . . C 3 27.02 -3.473 -7.119 1 22.01 ? C19 TES 1921 A 1 # _model_server_stats.io_time_ms 23 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 304 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 21 #