data_2YLQ # _model_server_result.job_id -gPwGOg-H1O7lAbwMZl8GA _model_server_result.datetime_utc '2024-11-28 02:12:00' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2ylq # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":1921}' # _entry.id 2YLQ # _exptl.entry_id 2YLQ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 288.424 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description TESTOSTERONE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2YLQ _cell.length_a 56.16 _cell.length_b 66.47 _cell.length_c 73.3 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2YLQ _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C19 H28 O2' _chem_comp.formula_weight 288.424 _chem_comp.id TES _chem_comp.mon_nstd_flag . _chem_comp.name TESTOSTERONE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 TES sing 294 n n C1 C10 TES sing 295 n n C1 H11 TES sing 296 n n C1 H12 TES sing 297 n n C2 C3 TES sing 298 n n C2 H21 TES sing 299 n n C2 H22 TES sing 300 n n C3 O3 TES doub 301 n n C3 C4 TES sing 302 n n C4 C5 TES doub 303 n n C4 H4 TES sing 304 n n C5 C6 TES sing 305 n n C5 C10 TES sing 306 n n C6 C7 TES sing 307 n n C6 H61 TES sing 308 n n C6 H62 TES sing 309 n n C7 C8 TES sing 310 n n C7 H71 TES sing 311 n n C7 H72 TES sing 312 n n C8 C9 TES sing 313 n n C8 C14 TES sing 314 n n C8 H8 TES sing 315 n n C9 C10 TES sing 316 n n C9 C11 TES sing 317 n n C9 H9 TES sing 318 n n C10 C19 TES sing 319 n n C11 C12 TES sing 320 n n C11 H111 TES sing 321 n n C11 H112 TES sing 322 n n C12 C13 TES sing 323 n n C12 H121 TES sing 324 n n C12 H122 TES sing 325 n n C13 C14 TES sing 326 n n C13 C17 TES sing 327 n n C13 C18 TES sing 328 n n C14 C15 TES sing 329 n n C14 H14 TES sing 330 n n C15 C16 TES sing 331 n n C15 H151 TES sing 332 n n C15 H152 TES sing 333 n n C16 C17 TES sing 334 n n C16 H161 TES sing 335 n n C16 H162 TES sing 336 n n C17 O17 TES sing 337 n n C17 H17 TES sing 338 n n O17 HO7 TES sing 339 n n C18 H181 TES sing 340 n n C18 H182 TES sing 341 n n C18 H183 TES sing 342 n n C19 H191 TES sing 343 n n C19 H192 TES sing 344 n n C19 H193 TES sing 345 n n # _atom_sites.entry_id 2YLQ _atom_sites.fract_transf_matrix[1][1] 0.017806 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015044 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013643 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 A 1 1920 1920 SO4 SO4 . C 3 TES A 1 1921 1921 TES TES . D 4 YLQ A 1 1922 1922 YLQ YLQ . E 5 HOH A 1 2001 2001 HOH HOH . E 5 HOH A 2 2002 2002 HOH HOH . E 5 HOH A 3 2003 2003 HOH HOH . E 5 HOH A 4 2004 2004 HOH HOH . E 5 HOH A 5 2005 2005 HOH HOH . E 5 HOH A 6 2006 2006 HOH HOH . E 5 HOH A 7 2007 2007 HOH HOH . E 5 HOH A 8 2008 2008 HOH HOH . E 5 HOH A 9 2009 2009 HOH HOH . E 5 HOH A 10 2010 2010 HOH HOH . E 5 HOH A 11 2011 2011 HOH HOH . E 5 HOH A 12 2012 2012 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 TES . . . C 3 27.283 -4.927 -5.14 1 25.42 ? C1 TES 1921 A 1 HETATM 2 C C2 TES . . . C 3 26.508 -6.18 -5.546 1 25.56 ? C2 TES 1921 A 1 HETATM 3 C C3 TES . . . C 3 25.094 -6.043 -5.025 1 26.01 ? C3 TES 1921 A 1 HETATM 4 O O3 TES . . . C 3 24.472 -7.03 -4.619 1 28.4 ? O3 TES 1921 A 1 HETATM 5 C C4 TES . . . C 3 24.469 -4.701 -5.02 1 23.11 ? C4 TES 1921 A 1 HETATM 6 C C5 TES . . . C 3 25.165 -3.588 -5.361 1 24.34 ? C5 TES 1921 A 1 HETATM 7 C C6 TES . . . C 3 24.431 -2.259 -5.376 1 24.65 ? C6 TES 1921 A 1 HETATM 8 C C7 TES . . . C 3 25.233 -1.25 -4.587 1 24.43 ? C7 TES 1921 A 1 HETATM 9 C C8 TES . . . C 3 26.605 -1.084 -5.173 1 23.77 ? C8 TES 1921 A 1 HETATM 10 C C9 TES . . . C 3 27.344 -2.433 -5.056 1 24.72 ? C9 TES 1921 A 1 HETATM 11 C C10 TES . . . C 3 26.634 -3.633 -5.703 1 25.29 ? C10 TES 1921 A 1 HETATM 12 C C11 TES . . . C 3 28.823 -2.36 -5.507 1 24.13 ? C11 TES 1921 A 1 HETATM 13 C C12 TES . . . C 3 29.594 -1.202 -4.828 1 24.83 ? C12 TES 1921 A 1 HETATM 14 C C13 TES . . . C 3 28.847 0.123 -4.933 1 23.12 ? C13 TES 1921 A 1 HETATM 15 C C14 TES . . . C 3 27.43 -0.05 -4.395 1 23.91 ? C14 TES 1921 A 1 HETATM 16 C C15 TES . . . C 3 26.9 1.367 -4.137 1 24.66 ? C15 TES 1921 A 1 HETATM 17 C C16 TES . . . C 3 28.158 2.203 -3.869 1 20.91 ? C16 TES 1921 A 1 HETATM 18 C C17 TES . . . C 3 29.329 1.232 -3.99 1 23.22 ? C17 TES 1921 A 1 HETATM 19 O O17 TES . . . C 3 30.519 1.915 -4.389 1 26.16 ? O17 TES 1921 A 1 HETATM 20 C C18 TES . . . C 3 28.808 0.542 -6.407 1 22.14 ? C18 TES 1921 A 1 HETATM 21 C C19 TES . . . C 3 26.764 -3.611 -7.232 1 22.99 ? C19 TES 1921 A 1 # _model_server_stats.io_time_ms 32 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 280 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 21 #