data_2YM8
#
_model_server_result.job_id            UWB6nsKP6IHB0s54lNmOKw 
_model_server_result.datetime_utc      '2025-03-05 19:12:30' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2ym8 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":1271}' 
#
_entry.id    2YM8 
#
_exptl.entry_id    2YM8 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              382.847 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            (R)-5-(8-CHLOROISOQUINOLIN-3-YLAMINO)-3-(1-(DIMETHYLAMINO)PROPAN-2-YLOXY)PYRAZINE-2-CARBONITRILE 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          95.38 
_cell.angle_gamma         90 
_cell.entry_id            2YM8 
_cell.length_a            44.77 
_cell.length_b            65.47 
_cell.length_c            57.93 
_cell.Z_PDB               2 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 2YM8 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C19 H19 Cl N6 O' 
_chem_comp.formula_weight    382.847 
_chem_comp.id                YM8 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              (R)-5-(8-CHLOROISOQUINOLIN-3-YLAMINO)-3-(1-(DIMETHYLAMINO)PROPAN-2-YLOXY)PYRAZINE-2-CARBONITRILE 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
CAA CAZ YM8 sing 385 n n 
CAA HAA YM8 sing 386 n n 
CAA HAAA YM8 sing 387 n n 
CAA HAAB YM8 sing 388 n n 
NBA CAB YM8 sing 389 n n 
CAB HAB YM8 sing 390 n n 
CAB HABA YM8 sing 391 n n 
CAB HABB YM8 sing 392 n n 
NBA CAC YM8 sing 393 n n 
CAC HAC YM8 sing 394 n n 
CAC HACA YM8 sing 395 n n 
CAC HACB YM8 sing 396 n n 
CAF NAD YM8 trip 397 n n 
CL CAS YM8 sing 398 n n 
CAT CAF YM8 sing 399 n n 
CAH CAG YM8 doub 400 n y 
CAG CAI YM8 sing 401 n y 
CAG HAG YM8 sing 402 n n 
CAS CAH YM8 sing 403 n y 
CAH HAH YM8 sing 404 n n 
CAX CAI YM8 doub 405 n y 
CAI HAI YM8 sing 406 n n 
CAU CAJ YM8 doub 407 n y 
CAJ NAN YM8 sing 408 n y 
CAJ HAJ YM8 sing 409 n n 
CAK NAO YM8 doub 410 n y 
CAK CAY YM8 sing 411 n y 
CAK HAK YM8 sing 412 n n 
CAV CAL YM8 doub 413 n y 
CAX CAL YM8 sing 414 n y 
CAL HAL YM8 sing 415 n n 
CAZ CAM YM8 sing 416 n n 
CAM NBA YM8 sing 417 n n 
CAM HAM YM8 sing 418 n n 
CAM HAMA YM8 sing 419 n n 
NAN CAT YM8 doub 420 n y 
NAO CAV YM8 sing 421 n y 
CAU NAP YM8 sing 422 n y 
NAP CAW YM8 doub 423 n y 
CAV NAQ YM8 sing 424 n n 
NAQ CAU YM8 sing 425 n n 
NAQ HNAQ YM8 sing 426 n n 
CAW OAR YM8 sing 427 n n 
CAZ OAR YM8 sing 428 n n 
CAS CAY YM8 doub 429 n y 
CAW CAT YM8 sing 430 n y 
CAY CAX YM8 sing 431 n y 
CAZ HAZ YM8 sing 432 n n 
#
_atom_sites.entry_id                     2YM8 
_atom_sites.fract_transf_matrix[1][1]    0.022336 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.002104 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.015274 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.017339 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 YM8 A 1 1271 1271 YM8 YM8 . 
C 3 EDO A 1 1272 1272 EDO EDO . 
D 3 EDO A 1 1273 1273 EDO EDO . 
E 3 EDO A 1 1274 1274 EDO EDO . 
F 3 EDO A 1 1275 1275 EDO EDO . 
G 3 EDO A 1 1276 1276 EDO EDO . 
H 3 EDO A 1 1277 1277 EDO EDO . 
I 3 EDO A 1 1278 1278 EDO EDO . 
J 3 EDO A 1 1279 1279 EDO EDO . 
K 3 EDO A 1 1280 1280 EDO EDO . 
L 4 HOH A 1 2001 2001 HOH HOH . 
L 4 HOH A 2 2002 2002 HOH HOH . 
L 4 HOH A 3 2003 2003 HOH HOH . 
L 4 HOH A 4 2004 2004 HOH HOH . 
L 4 HOH A 5 2005 2005 HOH HOH . 
L 4 HOH A 6 2006 2006 HOH HOH . 
L 4 HOH A 7 2007 2007 HOH HOH . 
L 4 HOH A 8 2008 2008 HOH HOH . 
L 4 HOH A 9 2009 2009 HOH HOH . 
L 4 HOH A 10 2010 2010 HOH HOH . 
L 4 HOH A 11 2011 2011 HOH HOH . 
L 4 HOH A 12 2012 2012 HOH HOH . 
L 4 HOH A 13 2013 2013 HOH HOH . 
L 4 HOH A 14 2014 2014 HOH HOH . 
L 4 HOH A 15 2015 2015 HOH HOH . 
L 4 HOH A 16 2016 2016 HOH HOH . 
L 4 HOH A 17 2017 2017 HOH HOH . 
L 4 HOH A 18 2018 2018 HOH HOH . 
L 4 HOH A 19 2019 2019 HOH HOH . 
L 4 HOH A 20 2020 2020 HOH HOH . 
L 4 HOH A 21 2021 2021 HOH HOH . 
L 4 HOH A 22 2022 2022 HOH HOH . 
L 4 HOH A 23 2023 2023 HOH HOH . 
L 4 HOH A 24 2024 2024 HOH HOH . 
L 4 HOH A 25 2025 2025 HOH HOH . 
L 4 HOH A 26 2026 2026 HOH HOH . 
L 4 HOH A 27 2027 2027 HOH HOH . 
L 4 HOH A 28 2028 2028 HOH HOH . 
L 4 HOH A 29 2029 2029 HOH HOH . 
L 4 HOH A 30 2030 2030 HOH HOH . 
L 4 HOH A 31 2031 2031 HOH HOH . 
L 4 HOH A 32 2032 2032 HOH HOH . 
L 4 HOH A 33 2033 2033 HOH HOH . 
L 4 HOH A 34 2034 2034 HOH HOH . 
L 4 HOH A 35 2035 2035 HOH HOH . 
L 4 HOH A 36 2036 2036 HOH HOH . 
L 4 HOH A 37 2037 2037 HOH HOH . 
L 4 HOH A 38 2038 2038 HOH HOH . 
L 4 HOH A 39 2039 2039 HOH HOH . 
L 4 HOH A 40 2040 2040 HOH HOH . 
L 4 HOH A 41 2041 2041 HOH HOH . 
L 4 HOH A 42 2042 2042 HOH HOH . 
L 4 HOH A 43 2043 2043 HOH HOH . 
L 4 HOH A 44 2044 2044 HOH HOH . 
L 4 HOH A 45 2045 2045 HOH HOH . 
L 4 HOH A 46 2046 2046 HOH HOH . 
L 4 HOH A 47 2047 2047 HOH HOH . 
L 4 HOH A 48 2048 2048 HOH HOH . 
L 4 HOH A 49 2049 2049 HOH HOH . 
L 4 HOH A 50 2050 2050 HOH HOH . 
L 4 HOH A 51 2051 2051 HOH HOH . 
L 4 HOH A 52 2052 2052 HOH HOH . 
L 4 HOH A 53 2053 2053 HOH HOH . 
L 4 HOH A 54 2054 2054 HOH HOH . 
L 4 HOH A 55 2055 2055 HOH HOH . 
L 4 HOH A 56 2056 2056 HOH HOH . 
L 4 HOH A 57 2057 2057 HOH HOH . 
L 4 HOH A 58 2058 2058 HOH HOH . 
L 4 HOH A 59 2059 2059 HOH HOH . 
L 4 HOH A 60 2060 2060 HOH HOH . 
L 4 HOH A 61 2061 2061 HOH HOH . 
L 4 HOH A 62 2062 2062 HOH HOH . 
L 4 HOH A 63 2063 2063 HOH HOH . 
L 4 HOH A 64 2064 2064 HOH HOH . 
L 4 HOH A 65 2065 2065 HOH HOH . 
L 4 HOH A 66 2066 2066 HOH HOH . 
L 4 HOH A 67 2067 2067 HOH HOH . 
L 4 HOH A 68 2068 2068 HOH HOH . 
L 4 HOH A 69 2069 2069 HOH HOH . 
L 4 HOH A 70 2070 2070 HOH HOH . 
L 4 HOH A 71 2071 2071 HOH HOH . 
L 4 HOH A 72 2072 2072 HOH HOH . 
L 4 HOH A 73 2073 2073 HOH HOH . 
L 4 HOH A 74 2074 2074 HOH HOH . 
L 4 HOH A 75 2075 2075 HOH HOH . 
L 4 HOH A 76 2076 2076 HOH HOH . 
L 4 HOH A 77 2077 2077 HOH HOH . 
L 4 HOH A 78 2078 2078 HOH HOH . 
L 4 HOH A 79 2079 2079 HOH HOH . 
L 4 HOH A 80 2080 2080 HOH HOH . 
L 4 HOH A 81 2081 2081 HOH HOH . 
L 4 HOH A 82 2082 2082 HOH HOH . 
L 4 HOH A 83 2083 2083 HOH HOH . 
L 4 HOH A 84 2084 2084 HOH HOH . 
L 4 HOH A 85 2085 2085 HOH HOH . 
L 4 HOH A 86 2086 2086 HOH HOH . 
L 4 HOH A 87 2087 2087 HOH HOH . 
L 4 HOH A 88 2088 2088 HOH HOH . 
L 4 HOH A 89 2089 2089 HOH HOH . 
L 4 HOH A 90 2090 2090 HOH HOH . 
L 4 HOH A 91 2091 2091 HOH HOH . 
L 4 HOH A 92 2092 2092 HOH HOH . 
L 4 HOH A 93 2093 2093 HOH HOH . 
L 4 HOH A 94 2094 2094 HOH HOH . 
L 4 HOH A 95 2095 2095 HOH HOH . 
L 4 HOH A 96 2096 2096 HOH HOH . 
L 4 HOH A 97 2097 2097 HOH HOH . 
L 4 HOH A 98 2098 2098 HOH HOH . 
L 4 HOH A 99 2099 2099 HOH HOH . 
L 4 HOH A 100 2100 2100 HOH HOH . 
L 4 HOH A 101 2101 2101 HOH HOH . 
L 4 HOH A 102 2102 2102 HOH HOH . 
L 4 HOH A 103 2103 2103 HOH HOH . 
L 4 HOH A 104 2104 2104 HOH HOH . 
L 4 HOH A 105 2105 2105 HOH HOH . 
L 4 HOH A 106 2106 2106 HOH HOH . 
L 4 HOH A 107 2107 2107 HOH HOH . 
L 4 HOH A 108 2108 2108 HOH HOH . 
L 4 HOH A 109 2109 2109 HOH HOH . 
L 4 HOH A 110 2110 2110 HOH HOH . 
L 4 HOH A 111 2111 2111 HOH HOH . 
L 4 HOH A 112 2112 2112 HOH HOH . 
L 4 HOH A 113 2113 2113 HOH HOH . 
L 4 HOH A 114 2114 2114 HOH HOH . 
L 4 HOH A 115 2115 2115 HOH HOH . 
L 4 HOH A 116 2116 2116 HOH HOH . 
L 4 HOH A 117 2117 2117 HOH HOH . 
L 4 HOH A 118 2118 2118 HOH HOH . 
L 4 HOH A 119 2119 2119 HOH HOH . 
L 4 HOH A 120 2120 2120 HOH HOH . 
L 4 HOH A 121 2121 2121 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C CAA YM8 . . . B 2 15.199 -3.321 11.244 1 45.84 ? CAA YM8 1271 A 1 
HETATM 2 C CAB YM8 . . . B 2 15.313 -3.911 16.028 1 32.21 ? CAB YM8 1271 A 1 
HETATM 3 C CAC YM8 . . . B 2 15.629 -1.746 15.02 1 28.48 ? CAC YM8 1271 A 1 
HETATM 4 N NAD YM8 . . . B 2 10.113 -1.804 13.6 1 30.14 ? NAD YM8 1271 A 1 
HETATM 5 CL CL YM8 . . . B 2 20.676 0.906 7.462 1 45.8 ? CL YM8 1271 A 1 
HETATM 6 C CAF YM8 . . . B 2 10.877 -1.31 12.913 1 33.78 ? CAF YM8 1271 A 1 
HETATM 7 C CAG YM8 . . . B 2 19.762 -1.984 10.076 1 43.38 ? CAG YM8 1271 A 1 
HETATM 8 C CAH YM8 . . . B 2 20.456 -1.175 9.182 1 42.25 ? CAH YM8 1271 A 1 
HETATM 9 C CAI YM8 . . . B 2 18.426 -1.723 10.363 1 38.66 ? CAI YM8 1271 A 1 
HETATM 10 C CAJ YM8 . . . B 2 12.427 0.994 10.592 1 25.62 ? CAJ YM8 1271 A 1 
HETATM 11 C CAK YM8 . . . B 2 17.818 1.222 8.266 1 40.94 ? CAK YM8 1271 A 1 
HETATM 12 C CAL YM8 . . . B 2 16.449 -0.368 10.022 1 38.04 ? CAL YM8 1271 A 1 
HETATM 13 C CAM YM8 . . . B 2 15.283 -3.626 13.612 1 39.47 ? CAM YM8 1271 A 1 
HETATM 14 N NAN YM8 . . . B 2 11.537 0.43 11.388 1 29.86 ? NAN YM8 1271 A 1 
HETATM 15 N NAO YM8 . . . B 2 16.549 1.473 8.544 1 39.72 ? NAO YM8 1271 A 1 
HETATM 16 N NAP YM8 . . . B 2 14.007 -0.681 11.094 1 28.27 ? NAP YM8 1271 A 1 
HETATM 17 N NAQ YM8 . . . B 2 14.557 1.055 9.615 1 33.73 ? NAQ YM8 1271 A 1 
HETATM 18 O OAR YM8 . . . B 2 13.421 -2.405 12.58 1 41.62 ? OAR YM8 1271 A 1 
HETATM 19 C CAS YM8 . . . B 2 19.813 -0.102 8.575 1 41.6 ? CAS YM8 1271 A 1 
HETATM 20 C CAT YM8 . . . B 2 11.849 -0.691 12.056 1 33.18 ? CAT YM8 1271 A 1 
HETATM 21 C CAU YM8 . . . B 2 13.684 0.425 10.411 1 26.02 ? CAU YM8 1271 A 1 
HETATM 22 C CAV YM8 . . . B 2 15.832 0.705 9.381 1 37.33 ? CAV YM8 1271 A 1 
HETATM 23 C CAW YM8 . . . B 2 13.094 -1.286 11.869 1 32.65 ? CAW YM8 1271 A 1 
HETATM 24 C CAX YM8 . . . B 2 17.785 -0.649 9.755 1 37.23 ? CAX YM8 1271 A 1 
HETATM 25 C CAY YM8 . . . B 2 18.477 0.157 8.865 1 39.71 ? CAY YM8 1271 A 1 
HETATM 26 C CAZ YM8 . . . B 2 14.845 -2.623 12.559 1 45.12 ? CAZ YM8 1271 A 1 
HETATM 27 N NBA YM8 . . . B 2 14.93 -3.035 14.913 1 35.57 ? NBA YM8 1271 A 1 
#
_model_server_stats.io_time_ms              0 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           309 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           27 
#